| Literature DB >> 30380763 |
Lan Hu1, Daniel A Griffith2, Yongwan Chun3.
Abstract
The geographic distribution of lung cancer rates tends to vary across a geographic landscape, and covariates (e.g., smoking rates, demographic factors, socio-economic indicators) commonly are employed in spatial analysis to explain the spatial heterogeneity of these cancer rates. However, such cancer risk factors often are not available, and conventional statistical models are unable to fully capture hidden spatial effects in cancer rates. Introducing random effects in the model specifications can furnish an efficient approach to account for variations that are unexplained due to omitted variables. Especially, a random effects model can be effective for a phenomenon that is static over time. The goal of this paper is to investigate geographic variation in Florida lung cancer incidence data for the time period 2000⁻2011 using random effects models. In doing so, a Moran eigenvector spatial filtering technique is utilized, which can allow a decomposition of random effects into spatially structured (SSRE) and spatially unstructured (SURE) components. Analysis results confirm that random effects models capture a substantial amount of variation in the cancer data. Furthermore, the results suggest that spatial pattern in the cancer data displays a mixture of positive and negative spatial autocorrelation, although the global map pattern of the random effects term may appear random.Entities:
Keywords: lung cancer incidence; negative spatial autocorrelation; positive spatial autocorrelation; random effects; spatial autocorrelation mixture
Mesh:
Year: 2018 PMID: 30380763 PMCID: PMC6266823 DOI: 10.3390/ijerph15112406
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Figure 1The spatial patterns of adjusted lung cancer incidence rates. (a) the State of Florida counties. Census tracts for: (b) the Jacksonville MSA; (c) the Orlando MSA; (d) the Miami MSA; (e) the Pensacola MSA; (f) the Tallahassee MSA; (g) the Tampa MSA.
Figure A1The spatial patterns of crude lung cancer incidence rates. (a) the State of Florida counties. Census tracts for: (b) the Jacksonville MSA; (c) the Orlando MSA; (d) the Miami MSA; (e) the Pensacola MSA; (f) the Tallahassee MSA; (g) the Tampa MSA.
Estimation results for Poisson models at the county resolution.
| Variables | Quasi-Poisson Model | Poisson Random Effects Model | ||||||
|---|---|---|---|---|---|---|---|---|
| Coeff. | Std. Error | VIF | Coeff. | Std. Error | Cor. † | |||
| Smoking | 4.060 | *** | 0.317 | 2.158 | 1.355 | * | 0.994 | <0.001 |
| Income | −0.262 | 0.262 | 2.763 | 0.191 | 0.617 | −0.034 | ||
| Education | −0.983 | * | 0.443 | 4.150 | 1.116 | 0.928 | <0.001 | |
| Poverty | −4.368 | *** | 1.027 | 7.584 | 1.608 | 2.191 | <0.001 | |
| Hispanic pop | −0.027 | 0.161 | 4.738 | 0.051 | 0.074 | 0.074 | ||
| Black pop | 1.587 | *** | 0.284 | 6.005 | −0.627 | 0.427 | 0.067 | |
| Immigrants | −0.015 | 0.013 | 2.449 | 0.033 | 0.050 | 0.021 | ||
| Overdispersion | 13.02 | 2.12 | ||||||
| Pseudo-R2 | 0.30 | 0.75 | ||||||
Significance codes: *** 0.001, * 0.05, ∙ 0.1. † This represents correlation coefficients between the RE term and the covariates.
Figure 2Spatial patterns of RE components for the county resolution. (a) the RE term; (b) the SSRE term; (c) the SSRE-PSA term; (d) the SSRE-NSA term; (e) the SURE term.
Estimation results for quasi-Poisson model specifications at the census tract resolution.
| Variables | Pensacola MSA | Tallahassee MSA | Jacksonville MSA | Orlando MSA | Miami MSA | Tampa MSA | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coeff. | Std. Error | Vif | Coeff. | Std. Error | Vif | Coeff. | Std. Error | Vif | Coeff. | Std. Error | Vif | Coeff. | Std. Error | Vif | Coeff. | Std. Error | Vif | |||||||
| Income | −1.10 | *** | 0.19 | 3.25 | −0.91 | ** | 0.17 | 2.68 | −0.80 | *** | 0.09 | 2.46 | −0.73 | *** | 0.07 | 1.75 | −0.40 | *** | 0.03 | 1.75 | −0.58 | *** | 0.05 | 1.77 |
| Education | −0.62 | 0.33 | 2.80 | 0.43 | 0.40 | 2.32 | −0.86 | *** | 0.20 | 2.56 | −0.44 | * | 0.20 | 2.47 | −0.35 | *** | 0.09 | 4.00 | −0.56 | *** | 0.12 | 2.29 | ||
| Poverty | 0.85 | ** | 0.31 | 3.15 | 0.94 | * | 0.37 | 3.15 | 0.12 | 0.19 | 2.66 | 1.23 | *** | 0.19 | 2.18 | 0.01 | 0.10 | 2.54 | 0.54 | *** | 0.11 | 2.24 | ||
| Hispanic pop | 0.96 | 0.72 | 1.14 | −0.68 | 0.54 | 1.14 | 0.81 | *** | 0.24 | 1.11 | −0.58 | *** | 0.07 | 1.39 | −0.51 | *** | 0.03 | 2.22 | −0.17 | *** | 0.06 | 1.44 | ||
| Black pop | −0.55 | *** | 0.13 | 2.56 | −0.72 | *** | 0.16 | 2.15 | −0.19 | *** | 0.06 | 2.10 | −0.30 | *** | 0.07 | 1.95 | −0.19 | *** | 0.03 | 1.92 | −0.08 | 0.05 | 1.50 | |
| Immigrants | −6.61 | * | 3.12 | 1.16 | −2.69 | 4.29 | 1.28 | −3.07 | 1.60 | 1.06 | −9.15 | *** | 1.32 | 1.29 | 10.21 | *** | 1.29 | 1.11 | −6.06 | ** | 1.86 | 1.21 | ||
| Overdispersion | 1.08 | 1.16 | 1.26 | 1.22 | 1.27 | 1.30 | ||||||||||||||||||
| Pseudo-R2 | 0.14 | 0.17 | 0.17 | 0.40 | 0.43 | 0.36 | ||||||||||||||||||
Significance codes: *** 0.001, ** 0.01, * 0.05, ∙ 0.1.
Estimation results for Poisson RE model specifications at the census tract resolution.
| Variables | Pensacola MSA | Tallahassee MSA | Jacksonville MSA | Orlando MSA | Miami MSA | Tampa MSA | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coeff. | Std. Error | Cor. † | Coeff. | Std. Error | Cor. † | Coeff. | Std. Error | Cor. † | Coeff. | Std. Error | Cor. † | Coeff. | Std. Error | Cor. † | Coeff. | Std. Error | Cor. † | |||||||
| Income | −1.06 | *** | 0.27 | 0.02 | −0.99 | *** | 0.23 | 0.08 | −0.78 | *** | 0.12 | <0.01 | −0.79 | *** | 0.10 | −0.02 | −0.41 | *** | 0.05 | <0.01 | −0.65 | *** | −0.65 | −0.04 |
| Education | −0.79 | * | 0.48 | 0.01 | 0.53 | 0.56 | −0.05 | −0.86 | *** | 0.31 | <0.01 | −0.48 | * | 0.28 | 0.01 | −0.47 | *** | 0.14 | <0.01 | −0.66 | *** | −0.66 | <0.01 | |
| Poverty | 0.73 | 0.46 | −0.01 | 0.91 | 0.48 | −0.07 | 0.17 | 0.28 | −0.01 | 1.02 | *** | 0.27 | 0.01 | 0.06 | 0.15 | <0.01 | 0.30 | * | 0.30 | 0.05 | ||||
| Hispanic pop | 0.44 | 1.02 | 0.01 | −0.61 | 0.79 | 0.10 | 0.86 | *** | 0.37 | <0.01 | −0.69 | *** | 0.10 | 0.01 | −0.58 | *** | 0.04 | <0.01 | −0.17 | *** | −0.17 | −0.02 | ||
| Black pop | −0.50 | *** | 0.20 | −0.01 | −0.69 | *** | 0.22 | −0.04 | −0.17 | *** | 0.09 | <0.01 | −0.31 | *** | 0.10 | <0.01 | −0.27 | *** | 0.05 | <0.01 | −0.03 | −0.03 | −0.02 | |
| Immigrants | −7.82 | * | 4.52 | 0.02 | −4.91 | 5.80 | −0.05 | −2.86 | 2.58 | <0.01 | −9.59 | *** | 1.95 | <0.01 | 8.06 | *** | 2.13 | <0.01 | −9.33 | *** | −9.33 | −0.02 | ||
| Overdispersion | 1.03 | 1.12 | 1.10 | 1.06 | 1.09 | 1.07 | ||||||||||||||||||
| Pseudo- | 0.19 | 0.23 | 0.22 | 0.44 | 0.51 | 0.45 | ||||||||||||||||||
Significance codes: *** 0.001, * 0.05, ∙ 0.1. † This represents correlation coefficients between the RE term and covariates.
The amount of variation accounted for by the RE terms.
| Models | Florida | Pensacola MSA | Tallahassee MSA | Jacksonville MSA | Orlando MSA | Miami MSA | Tampa MSA |
|---|---|---|---|---|---|---|---|
| RE models intercept-only | 58.39% | 27.13% | 11.64% | 25.14% | 13.68% | 24.46% | 23.88% |
| RE models with covariates | 58.19% | 25.53% | 9.91% | 21.20% | 11.14% | 23.47% | 22.98% |
Figure 3The amount of geographic variation in lung cancer incidence rates accounted for by the RE terms. The first bar is for Florida at the county resolution, and the other six are for the MSAs at the census tract resolution.
Figure 4Spatial patterns of RE components at the census tract resolution. (a1–a6) the RE terms; (b1–b6) the SSRE terms; (c1–c6) the SSRE-PSA terms; (d1–d6) the SSRE-NSA terms; (e1–e6) the SURE terms. Rows from top to bottom: Jacksonville, Orlando, Miami, Pensacola, Tallahassee, and Tampa MSAs.