Literature DB >> 30376293

Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase.

Mercedes Ramirez-Escudero1, Patricia Molina-Espeja2, Patricia Gomez de Santos2, Martin Hofrichter3, Julia Sanz-Aparicio1, Miguel Alcalde2.   

Abstract

Because of their minimal requirements, substrate promiscuity and product selectivity, fungal peroxygenases are now considered to be the jewel in the crown of C-H oxyfunctionalization biocatalysts. In this work, the crystal structure of the first laboratory-evolved peroxygenase expressed by yeast was determined at a resolution of 1.5 Å. Notable differences were detected between the evolved and native peroxygenase from Agrocybe aegerita, including the presence of a full N-terminus and a broader heme access channel due to the mutations that accumulated through directed evolution. Further mutagenesis and soaking experiments with a palette of peroxygenative and peroxidative substrates suggested dynamic trafficking through the heme channel as the main driving force for the exceptional substrate promiscuity of peroxygenase. Accordingly, this study provides the first structural evidence at an atomic level regarding the mode of substrate binding for this versatile biocatalyst, which is discussed within a biological and chemical context.

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Year:  2018        PMID: 30376293     DOI: 10.1021/acschembio.8b00500

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  9 in total

1.  Structural Characterization of Two Short Unspecific Peroxygenases: Two Different Dimeric Arrangements.

Authors:  Dolores Linde; Elena Santillana; Elena Fernández-Fueyo; Alejandro González-Benjumea; Juan Carro; Ana Gutiérrez; Angel T Martínez; Antonio Romero
Journal:  Antioxidants (Basel)       Date:  2022-04-30

Review 2.  Identification and Expression of New Unspecific Peroxygenases - Recent Advances, Challenges and Opportunities.

Authors:  Alina Kinner; Katrin Rosenthal; Stephan Lütz
Journal:  Front Bioeng Biotechnol       Date:  2021-07-07

3.  Two New Unspecific Peroxygenases from Heterologous Expression of Fungal Genes in Escherichia coli.

Authors:  Dolores Linde; Andrés Olmedo; Alejandro González-Benjumea; María Estévez; Chantal Renau-Mínguez; Juan Carro; Elena Fernández-Fueyo; Ana Gutiérrez; Angel T Martínez
Journal:  Appl Environ Microbiol       Date:  2020-03-18       Impact factor: 4.792

4.  A modular two yeast species secretion system for the production and preparative application of unspecific peroxygenases.

Authors:  Pascal Püllmann; Anja Knorrscheidt; Judith Münch; Paul R Palme; Wolfgang Hoehenwarter; Sylvestre Marillonnet; Miguel Alcalde; Bernhard Westermann; Martin J Weissenborn
Journal:  Commun Biol       Date:  2021-05-12

5.  A holistic carrier-bound immobilization approach for unspecific peroxygenase.

Authors:  Piera De Santis; Noémi Petrovai; Lars-Erik Meyer; Markus Hobisch; Selin Kara
Journal:  Front Chem       Date:  2022-08-30       Impact factor: 5.545

6.  Functional Expression of Two Unusual Acidic Peroxygenases from Candolleomyces aberdarensis in Yeasts by Adopting Evolved Secretion Mutations.

Authors:  Patricia Gomez de Santos; Manh Dat Hoang; Jan Kiebist; Harald Kellner; René Ullrich; Katrin Scheibner; Martin Hofrichter; Christiane Liers; Miguel Alcalde
Journal:  Appl Environ Microbiol       Date:  2021-09-10       Impact factor: 4.792

7.  Exploring the Role of Phenylalanine Residues in Modulating the Flexibility and Topography of the Active Site in the Peroxygenase Variant PaDa-I.

Authors:  Joaquin Ramirez-Ramirez; Javier Martin-Diaz; Nina Pastor; Miguel Alcalde; Marcela Ayala
Journal:  Int J Mol Sci       Date:  2020-08-10       Impact factor: 5.923

Review 8.  Peroxide-Mediated Oxygenation of Organic Compounds by Fungal Peroxygenases.

Authors:  Martin Hofrichter; Harald Kellner; Robert Herzog; Alexander Karich; Jan Kiebist; Katrin Scheibner; René Ullrich
Journal:  Antioxidants (Basel)       Date:  2022-01-14

Review 9.  A Unique P450 Peroxygenase System Facilitated by a Dual-Functional Small Molecule: Concept, Application, and Perspective.

Authors:  Siyu Di; Shengxian Fan; Fengjie Jiang; Zhiqi Cong
Journal:  Antioxidants (Basel)       Date:  2022-03-10
  9 in total

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