| Literature DB >> 30364671 |
Enrico Pellegrini1, Lucia Ballerini1, Maria Del C Valdes Hernandez1, Francesca M Chappell1, Victor González-Castro2, Devasuda Anblagan1, Samuel Danso1, Susana Muñoz-Maniega1, Dominic Job1, Cyril Pernet1, Grant Mair1, Tom J MacGillivray1,3, Emanuele Trucco4, Joanna M Wardlaw1,5.
Abstract
INTRODUCTION: Advanced machine learning methods might help to identify dementia risk from neuroimaging, but their accuracy to date is unclear.Entities:
Keywords: Cerebrovascular disease; Classification; Dementia; MRI; Machine learning; Pathological aging; Segmentation; Small vessel disease
Year: 2018 PMID: 30364671 PMCID: PMC6197752 DOI: 10.1016/j.dadm.2018.07.004
Source DB: PubMed Journal: Alzheimers Dement (Amst) ISSN: 2352-8729
Fig. 1Workflow of traditional (supervised) machine learning studies. For deep learning, feature selection, feature vector, and the classifier to be trained (also preprocessing in some cases) are compressed into a single action (box).
Fig. 2Flowchart of search and exclusion stages of the review.
Number of comparisons in each systematic review analysis group using specified data source, machine learning method, types of imaging and nonimaging data, and by study size
| Data sources | HC versus AD | HC versus MCI | MCInc versus MCIc | MCI versus AD | Total |
|---|---|---|---|---|---|
| ADNI | 54 | 24 | 34 | 7 | 119 |
| ADNI + Bdx-3C | 0 | 0 | 1 | 0 | 1 |
| AddNeuroMed | 1 | 0 | 2 | 0 | 3 |
| AddNeuroMed + ADNI | 2 | 1 | 1 | 0 | 4 |
| Local | 4 | 3 | 0 | 0 | 7 |
| OASIS | 7 | 2 | 0 | 1 | 10 |
| Total | 68 | 30 | 38 | 8 | 144 |
| Machine learning method | |||||
| AdaBoost | 1 | 0 | 1 | 0 | 2 |
| Deep Learning | 2 | 2 | 0 | 0 | 4 |
| Gaussian process | 0 | 0 | 1 | 0 | 1 |
| LDA | 5 | 0 | 5 | 1 | 11 |
| Logistic regression | 4 | 0 | 2 | 0 | 6 |
| OPLS | 2 | 1 | 1 | 0 | 4 |
| QDA | 0 | 0 | 1 | 0 | 1 |
| RBF-NN | 0 | 0 | 1 | 0 | 1 |
| Random forest | 3 | 1 | 3 | 0 | 7 |
| SRC | 2 | 1 | 2 | 0 | 5 |
| SVM | 39 | 22 | 17 | 7 | 85 |
| SVM + MKL | 3 | 1 | 1 | 0 | 5 |
| SVM + OPLS | 1 | 0 | 1 | 0 | 2 |
| SVM + random forest | 2 | 1 | 2 | 0 | 5 |
| SVM + SRC | 1 | 1 | 0 | 0 | 2 |
| kNN | 3 | 0 | 0 | 0 | 3 |
| Total | 68 | 30 | 38 | 8 | 144 |
| Types of imaging and imaging plus nonimaging data used | |||||
| T1w only | 46 | 13 | 26 | 6 | 91 |
| T1w and other imaging data | 8 | 8 | 2 | 0 | 18 |
| T1w and other types of data | 8 | 3 | 8 | 1 | 20 |
| T1w and both other imaging and types of data | 6 | 6 | 2 | 1 | 15 |
| Total | 68 | 30 | 38 | 8 | 144 |
| Size of data set (range from 100 to 902 participants) | |||||
| 150 and under | 30 | 4 | 9 | 2 | 45 |
| 151 to 200 | 4 | 10 | 6 | 0 | 20 |
| 201 to 250 | 9 | 4 | 6 | 0 | 19 |
| 251 to 300 | 4 | 2 | 3 | 0 | 9 |
| Over 300 | 21 | 10 | 14 | 6 | 51 |
| Total | 68 | 30 | 38 | 8 | 144 |
Abbreviations: HC, healthy control; AD, Alzheimer's disease; MCI, mild cognitive impairment; nc, nonconverter to AD; T1w, T1-weighted magnetic resonance imaging; c, converter to AD; LDA, linear discriminant analysis; KNN, k-nearest neighbors; OPLS, Orthogonal Projections to Latent Structures; SRC, Sparse Representation Classification.
NOTE. Individual studies contribute to more than one analysis and use more than one data source, machine learning method, combinations of imaging data, and more than one data set (hence more than one sample size in some studies).
In the 68 HC versus AD comparisons, one study is counted twice as it used two different kinds of imaging.
Fig. 3Differentiation of (A) healthy controls from AD, (B) HC from MCI, (C) MCI converters from nonconverters, and (D) MCI from AD, ordered according to the type of data used: T1W only, T1W + other sequences, T1W + nonimaging data, and T1W + other sequences + nonimaging data. Abbreviations: AD, Alzheimer's disease; HC = healthy control; MCI, mild cognitive impairment; T1w, T1-weighted magnetic resonance imaging.
Fig. 4Studies which included more than one diagnostic classification. (A) Healthy controls versus MCI and healthy controls versus AD. (B) Healthy controls versus MCI converting and MCI converting versus MCI nonconverting. (C) MCI converting versus MCI nonconverting and MCI versus AD. (D) Healthy controls versus AD and MCI versus AD. Abbreviations: AD, Alzheimer's disease; MCI, mild cognitive impairment.