Literature DB >> 30361860

Multispectroscopic and Computational Investigation of ct-DNA Binding Properties with Hydroxybenzylidene Containing Tetrahydrocarbazole Derivative.

Sule Ozkan1, Tugba Taskin-Tok2, Ayse Uzgoren-Baran3, Nuriye Akbay4.   

Abstract

Mode of interaction of a new tetrahydrocarbazole derivative with ct-DNA has been investigated systematically using fluorescence spectroscopy, UV-Vis spectroscopy and circular dichroism spectroscopy. It is concluded that TAH could intercalate into the base pairs of ct-DNA, and the fluorescence quenching by ct-DNA was static quenching type. Beside the multispectroscopic results, computational studies were done. Molecular docking results revealed that the TAH-DNAs complexes might be classified as druggable molecule in drug design. Additionally, DNA binding studies exhibited that TAH complexes have different interaction and orientation abilities to each DNA isomer. Combination of experimental and computational data showed that reported TAH is promising structure and deserves further applications.

Entities:  

Keywords:  Fluorescence; Groove binding; Stern-Volmer; Tetrahydrocabazoles; ct-DNA

Mesh:

Substances:

Year:  2018        PMID: 30361860     DOI: 10.1007/s10895-018-2314-4

Source DB:  PubMed          Journal:  J Fluoresc        ISSN: 1053-0509            Impact factor:   2.217


  26 in total

Review 1.  Isolation and synthesis of biologically active carbazole alkaloids.

Authors:  Hans-Joachim Knölker; Kethiri R Reddy
Journal:  Chem Rev       Date:  2002-11       Impact factor: 60.622

Review 2.  Noncovalent interactions with DNA: an overview.

Authors:  Lucjan Strekowski; Beth Wilson
Journal:  Mutat Res       Date:  2007-03-24       Impact factor: 2.433

3.  Circular dichroism to determine binding mode and affinity of ligand-DNA interactions.

Authors:  Nichola C Garbett; Patricia A Ragazzon; Jonathan B Chaires
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 4.  Advances in DNA-ligands with groove binding, intercalating and/or alkylating activity: chemistry, DNA-binding and biology.

Authors:  Ulf Pindur; Michaela Jansen; Thomas Lemster
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

5.  Design, synthesis and in vitro antimalarial activity of an acylhydrazone library.

Authors:  Patricia Melnyk; Virginie Leroux; Christian Sergheraert; Philippe Grellier
Journal:  Bioorg Med Chem Lett       Date:  2005-11-02       Impact factor: 2.823

6.  Synthesis of a novel fluorescent probe useful for DNA detection.

Authors:  Bin Qiu; Longhua Guo; Wei Wang; Guonan Chen
Journal:  Biosens Bioelectron       Date:  2006-12-08       Impact factor: 10.618

7.  Synthesis, characterization and evaluation of antituberculosis activity of some hydrazones.

Authors:  Kaymakçioğlu B Koçyiğit; S Rollas
Journal:  Farmaco       Date:  2002-07

8.  Hydrazones of 1,2-benzisothiazole hydrazides: synthesis, antimicrobial activity and QSAR investigations.

Authors:  Paola Vicini; Franca Zani; Pietro Cozzini; Irini Doytchinova
Journal:  Eur J Med Chem       Date:  2002-07       Impact factor: 6.514

9.  DNA binding and cleavage properties of certain tetrammine ruthenium(II) complexes of modified 1,10-phenanthrolines--effect of hydrogen-bonding on DNA-binding affinity.

Authors:  P Uma Maheswari; M Palaniandavar
Journal:  J Inorg Biochem       Date:  2004-02       Impact factor: 4.155

10.  Synthesis and sequence-specific DNA binding of a topoisomerase inhibitory analog of Hoechst 33258 designed for altered base and sequence recognition.

Authors:  M P Singh; T Joseph; S Kumar; Y Bathini; J W Lown
Journal:  Chem Res Toxicol       Date:  1992 Sep-Oct       Impact factor: 3.739

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  1 in total

1.  Spectroscopic Studies on the Interaction of Naphthyridines with DNA and Fluorescent Detection of DNA in Agarose Gel.

Authors:  G Mahalakshmi; B Selvakumar; K N Vennila; P Lakshmana Rao; S Madhuri; M Seenivasaperumal; Kuppanagounder P Elango
Journal:  J Fluoresc       Date:  2021-01-03       Impact factor: 2.217

  1 in total

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