Literature DB >> 3035502

Structure and sequence of a UDP glucose pyrophosphorylase gene of Dictyostelium discoideum.

J A Ragheb, R P Dottin.   

Abstract

Cell-cell contact and exogenous cAMP regulate the expression of uridine diphosphoglucose pyrophosphorylase (UDPGP) of Dictyostelium discoideum (B. Haribabu, A. Rajkovic and R. P. Dottin, 1986, Dev. Biol., Vol. 113, 436-442). cAMP appears to regulate gene expression in Dictyostelium by transmembrane signal transduction (B. Haribabu and R. Dottin, 1986, Mol. Cell. Biol. 6, 2402-2408). To further characterize the mechanism of action of cAMP on the expression of this gene and the nature of the defects in UDPGP mutants that abort development, we sequenced the cDNA and the genomic DNA, including intervening and flanking sequences. The deduced amino acid sequence predicts a polypeptide of 57,893 d. molecular weight. Three short (100-200 nucleotides) A+T rich introns occur within the coding sequences but only one of them contains a sequence TAACTAAC, similar to the yeast lariat acceptor site. The 5' flanking sequences are also A+T rich and contain an oligo A tract (-14 to -24), a TATA box (-25 to -32), and a short G+C rich region (-63 to -101) which may be a control region. From -196 to -209 is a sequence AAAGTAGTATTCAA which matches in 11 of its 14 nucleotides, a sequence found upstream from the hormonally regulated P-enolypyruvate carboxykinase gene of rat.

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Year:  1987        PMID: 3035502      PMCID: PMC340789          DOI: 10.1093/nar/15.9.3891

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  24 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Isolation and characterization of mutations affecting UDPG pyrophosphorylase activity in Dictyostelium discoideum.

Authors:  R L Dimond; P A Farnsworth; W F Loomis
Journal:  Dev Biol       Date:  1976-05       Impact factor: 3.582

3.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

4.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

5.  Control of enzyme synthesis by cellular interaction during development of the cellular slime mold Dictyostelium discoideum.

Authors:  P C Newell; M Longlands; M Sussman
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

6.  Developmental regulation of multiple forms of UDPglucose pyrophosphorylase of Dictyostelium.

Authors:  B R Fishel; R E Manrow; R P Dottin
Journal:  Dev Biol       Date:  1982-07       Impact factor: 3.582

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  Characterization and transcription analysis of a cloned sequence derived from a major developmentally regulated mRNA of D. discoideum.

Authors:  J G Williams; M M Lloyd; J M Devine
Journal:  Cell       Date:  1979-08       Impact factor: 41.582

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Synthesis and stability of developmentally regulated dictyostelium mRNAs are affected by cell--cell contact and cAMP.

Authors:  S Chung; S M Landfear; D D Blumberg; N S Cohen; H F Lodish
Journal:  Cell       Date:  1981-06       Impact factor: 41.582

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  14 in total

1.  Toward a blueprint for UDP-glucose pyrophosphorylase structure/function properties: homology-modeling analyses.

Authors:  Matt Geisler; Malgorzata Wilczynska; Stanislaw Karpinski; Leszek A Kleczkowski
Journal:  Plant Mol Biol       Date:  2005-03-24       Impact factor: 4.076

2.  Nucleotide sequence and expression analysis of the Acetobacter xylinum uridine diphosphoglucose pyrophosphorylase gene.

Authors:  G Brede; E Fjaervik; S Valla
Journal:  J Bacteriol       Date:  1991-11       Impact factor: 3.490

3.  Sequence organization and gene expression of pGD1, a plasmid found in a wild isolate of Dictyostelium.

Authors:  H Orii; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

4.  Nucleotide sequence and characterization of the transcript of a Dictyostelium ribosomal protein gene.

Authors:  L F Steel; A Smyth; A Jacobson
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

5.  Nuclear pre-mRNA introns: analysis and comparison of intron sequences from Tetrahymena thermophila and other eukaryotes.

Authors:  C Csank; F M Taylor; D W Martindale
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

6.  The molecular basis for alternative splicing of the CABP1 transcripts in Dictyostelium discoideum.

Authors:  C E Grant; G Bain; A Tsang
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

7.  Expression and organization of BP74, a cyclic AMP-regulated gene expressed during Dictyostelium discoideum development.

Authors:  S B Hopkinson; R S Pollenz; I Drummond; R L Chisholm
Journal:  Mol Cell Biol       Date:  1989-10       Impact factor: 4.272

8.  Identification of a signal transduction response sequence element necessary for induction of a Dictyostelium discoideum gene by extracellular cyclic AMP.

Authors:  J Pavlovic; B Haribabu; R P Dottin
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

9.  Analysis of the expression of potato uridinediphosphate-glucose pyrophosphorylase and its inhibition by antisense RNA.

Authors:  R Zrenner; L Willmitzer; U Sonnewald
Journal:  Planta       Date:  1993       Impact factor: 4.116

10.  A developmentally regulated gene encodes the dictyostelium homolog of yeast ribosomal protein S4 and mammalian LLRep3 proteins.

Authors:  J A Proffitt; P S Jagger; G A Wilson; J T Donovan; D C Widdowson; B D Hames
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

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