Literature DB >> 30350439

Molecular basis for chromatin assembly and modification by multiprotein complexes.

M Daniel Ricketts1,2, Joseph Han3, Mary R Szurgot4, Ronen Marmorstein1,2,3,4.   

Abstract

Epigenetic regulation of the chromatin landscape is often orchestrated through modulation of nucleosomes. Nucleosomes are composed of two copies each of the four core histones, H2A, H2B, H3, and H4, wrapped in ~150 bp of DNA. We focus this review on recent structural studies that further elucidate the mechanisms used by macromolecular complexes to mediate histone modification and nucleosome assembly. Nucleosome assembly, spacing, and variant histone incorporation are coordinated by chromatin remodeler and histone chaperone complexes. Several recent structural studies highlight how disparate families of histone chaperones and chromatin remodelers share similar features that underlie how they interact with their respective histone or nucleosome substrates. Post-translational modification of histone residues is mediated by enzymatic subunits within large complexes. Until recently, relatively little was known about how association with auxiliary subunits serves to modulate the activity and specificity of the enzymatic subunit. Analysis of several recent structures highlights the different modes that auxiliary subunits use to influence enzymatic activity or direct specificity toward individual histone residues.
© 2018 The Protein Society.

Keywords:  Histone chaperones; chromatin regulation; chromatin remodeling; epigenetic mechanisms; histone modification complexes; histones

Mesh:

Substances:

Year:  2018        PMID: 30350439      PMCID: PMC6319814          DOI: 10.1002/pro.3535

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  92 in total

1.  Nucleosome mobilization catalysed by the yeast SWI/SNF complex.

Authors:  I Whitehouse; A Flaus; B R Cairns; M F White; J L Workman; T Owen-Hughes
Journal:  Nature       Date:  1999-08-19       Impact factor: 49.962

2.  Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.

Authors:  Maria Hondele; Tobias Stuwe; Markus Hassler; Felix Halbach; Andrew Bowman; Elisa T Zhang; Bianca Nijmeijer; Christiane Kotthoff; Vladimir Rybin; Stefan Amlacher; Ed Hurt; Andreas G Ladurner
Journal:  Nature       Date:  2013-05-22       Impact factor: 49.962

3.  Structure of the variant histone H3.3-H4 heterodimer in complex with its chaperone DAXX.

Authors:  Chao-Pei Liu; Chaoyang Xiong; Mingzhu Wang; Zhouliang Yu; Na Yang; Ping Chen; Zhiguo Zhang; Guohong Li; Rui-Ming Xu
Journal:  Nat Struct Mol Biol       Date:  2012-11-11       Impact factor: 15.369

4.  The NuA4 Core Complex Acetylates Nucleosomal Histone H4 through a Double Recognition Mechanism.

Authors:  Peng Xu; Chengmin Li; Zhihong Chen; Shuanying Jiang; Shilong Fan; Jiawei Wang; Junbiao Dai; Ping Zhu; Zhucheng Chen
Journal:  Mol Cell       Date:  2016-09-01       Impact factor: 17.970

5.  Chromatin structure: a repeating unit of histones and DNA.

Authors:  R D Kornberg
Journal:  Science       Date:  1974-05-24       Impact factor: 47.728

6.  Influence of histone H1 on chromatin structure.

Authors:  F Thoma; T Koller
Journal:  Cell       Date:  1977-09       Impact factor: 41.582

7.  FACT Disrupts Nucleosome Structure by Binding H2A-H2B with Conserved Peptide Motifs.

Authors:  David J Kemble; Laura L McCullough; Frank G Whitby; Tim Formosa; Christopher P Hill
Journal:  Mol Cell       Date:  2015-10-08       Impact factor: 17.970

Review 8.  The Polycomb complex PRC2 and its mark in life.

Authors:  Raphaël Margueron; Danny Reinberg
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

9.  Structural and mechanistic insights into regulation of HBO1 histone acetyltransferase activity by BRPF2.

Authors:  Ye Tao; Chen Zhong; Junjun Zhu; Shutong Xu; Jianping Ding
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

10.  AEBP2 as a potential targeting protein for Polycomb Repression Complex PRC2.

Authors:  Hana Kim; Keunsoo Kang; Joomyeong Kim
Journal:  Nucleic Acids Res       Date:  2009-03-17       Impact factor: 16.971

View more
  3 in total

1.  SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

Authors:  Manal Alsulami; Nayla Munawar; Eugene Dillon; Giorgio Oliviero; Kieran Wynne; Mona Alsolami; Catherine Moss; Peadar Ó Gaora; Fergal O'Meara; David Cotter; Gerard Cagney
Journal:  Mol Cell Proteomics       Date:  2019-05-10       Impact factor: 5.911

Review 2.  Computational methods and next-generation sequencing approaches to analyze epigenetics data: Profiling of methods and applications.

Authors:  Itika Arora; Trygve O Tollefsbol
Journal:  Methods       Date:  2020-09-14       Impact factor: 3.608

3.  Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.

Authors:  Ivan Corbeski; Xiaohu Guo; Bruna V Eckhardt; Domenico Fasci; Wouter Wiegant; Melissa A Graewert; Kees Vreeken; Hans Wienk; Dmitri I Svergun; Albert J R Heck; Haico van Attikum; Rolf Boelens; Titia K Sixma; Francesca Mattiroli; Hugo van Ingen
Journal:  Sci Adv       Date:  2022-07-27       Impact factor: 14.957

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.