Literature DB >> 30349086

A biobank of patient-derived pediatric brain tumor models.

Sebastian Brabetz1,2,3, Sarah E S Leary4,5, Susanne N Gröbner1,2, Madison W Nakamoto5, Huriye Şeker-Cin2, Emily J Girard5, Bonnie Cole4, Andrew D Strand5, Karina L Bloom5, Volker Hovestadt6,7,8, Norman L Mack1,2,6, Fiona Pakiam5, Benjamin Schwalm1,2, Andrey Korshunov9,10, Gnana Prakash Balasubramanian1,2, Paul A Northcott2,11, Kyle D Pedro5, Joyoti Dey5,12, Stacey Hansen5, Sally Ditzler5, Peter Lichter6, Lukas Chavez1,2,13, David T W Jones1,2, Jan Koster14, Stefan M Pfister15,16,17, Marcel Kool18,19, James M Olson20,21.   

Abstract

Brain tumors are the leading cause of cancer-related death in children. Genomic studies have provided insights into molecular subgroups and oncogenic drivers of pediatric brain tumors that may lead to novel therapeutic strategies. To evaluate new treatments, better preclinical models adequately reflecting the biological heterogeneity are needed. Through the Children's Oncology Group ACNS02B3 study, we have generated and comprehensively characterized 30 patient-derived orthotopic xenograft models and seven cell lines representing 14 molecular subgroups of pediatric brain tumors. Patient-derived orthotopic xenograft models were found to be representative of the human tumors they were derived from in terms of histology, immunohistochemistry, gene expression, DNA methylation, copy number, and mutational profiles. In vivo drug sensitivity of targeted therapeutics was associated with distinct molecular tumor subgroups and specific genetic alterations. These models and their molecular characterization provide an unprecedented resource for the cancer community to study key oncogenic drivers and to evaluate novel treatment strategies.

Entities:  

Mesh:

Year:  2018        PMID: 30349086     DOI: 10.1038/s41591-018-0207-3

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  52 in total

Review 1.  Provocative questions in osteosarcoma basic and translational biology: A report from the Children's Oncology Group.

Authors:  Ryan D Roberts; Michael M Lizardo; Damon R Reed; Pooja Hingorani; Jason Glover; Wendy Allen-Rhoades; Timothy Fan; Chand Khanna; E Alejandro Sweet-Cordero; Thomas Cash; Michael W Bishop; Meenakshi Hegde; Aparna R Sertil; Christian Koelsche; Lisa Mirabello; David Malkin; Poul H Sorensen; Paul S Meltzer; Katherine A Janeway; Richard Gorlick; Brian D Crompton
Journal:  Cancer       Date:  2019-07-29       Impact factor: 6.860

2.  Genomic and Phenotypic Characterization of a Broad Panel of Patient-Derived Xenografts Reflects the Diversity of Glioblastoma.

Authors:  Rachael A Vaubel; Shulan Tian; Dioval Remonde; Mark A Schroeder; Ann C Mladek; Gaspar J Kitange; Alissa Caron; Thomas M Kollmeyer; Rebecca Grove; Sen Peng; Brett L Carlson; Daniel J Ma; Gobinda Sarkar; Lisa Evers; Paul A Decker; Huihuang Yan; Harshil D Dhruv; Michael E Berens; Qianghu Wang; Bianca M Marin; Eric W Klee; Andrea Califano; Daniel H LaChance; Jeanette E Eckel-Passow; Roel G Verhaak; Erik P Sulman; Terry C Burns; Fredrick B Meyer; Brian P O'Neill; Nhan L Tran; Caterina Giannini; Robert B Jenkins; Ian F Parney; Jann N Sarkaria
Journal:  Clin Cancer Res       Date:  2019-12-18       Impact factor: 12.531

3.  Single-Cell Transcriptomics in Medulloblastoma Reveals Tumor-Initiating Progenitors and Oncogenic Cascades during Tumorigenesis and Relapse.

Authors:  Liguo Zhang; Xuelian He; Xuezhao Liu; Feng Zhang; L Frank Huang; Andrew S Potter; Lingli Xu; Wenhao Zhou; Tao Zheng; Zaili Luo; Kalen P Berry; Allison Pribnow; Stephanie M Smith; Christine Fuller; Blaise V Jones; Maryam Fouladi; Rachid Drissi; Zeng-Jie Yang; W Clay Gustafson; Marc Remke; Scott L Pomeroy; Emily J Girard; James M Olson; A Sorana Morrissy; Maria C Vladoiu; Jiao Zhang; Weidong Tian; Mei Xin; Michael D Taylor; S Steven Potter; Martine F Roussel; William A Weiss; Q Richard Lu
Journal:  Cancer Cell       Date:  2019-08-29       Impact factor: 31.743

4.  Optimal therapeutic targeting by HDAC inhibition in biopsy-derived treatment-naïve diffuse midline glioma models.

Authors:  Nicholas A Vitanza; Matt C Biery; Carrie Myers; Eric Ferguson; Ye Zheng; Emily J Girard; Justyna M Przystal; Giulia Park; Alyssa Noll; Fiona Pakiam; Conrad A Winter; Shelli M Morris; Jay Sarthy; Bonnie L Cole; Sarah E S Leary; Courtney Crane; Nicole A P Lieberman; Sabine Mueller; Javad Nazarian; Raphael Gottardo; Mi-Youn Brusniak; Andrew J Mhyre; James M Olson
Journal:  Neuro Oncol       Date:  2021-03-25       Impact factor: 12.300

Review 5.  Using Pharmacology to Squeeze the Life Out of Childhood Leukemia, and Potential Strategies to Achieve Breakthroughs in Medulloblastoma Treatment.

Authors:  Juwina Wijaya; Tomoka Gose; John D Schuetz
Journal:  Pharmacol Rev       Date:  2020-07       Impact factor: 25.468

6.  Functional Precision Medicine Identifies New Therapeutic Candidates for Medulloblastoma.

Authors:  Jessica M Rusert; Edwin F Juarez; Sebastian Brabetz; Marcel Kool; Jill P Mesirov; Robert J Wechsler-Reya; James Jensen; Alexandra Garancher; Lianne Q Chau; Silvia K Tacheva-Grigorova; Sameerah Wahab; Yoko T Udaka; Darren Finlay; Huriye Seker-Cin; Brendan Reardon; Susanne Gröbner; Jonathan Serrano; Jonas Ecker; Lin Qi; Mari Kogiso; Yuchen Du; Patricia A Baxter; Jacob J Henderson; Michael E Berens; Kristiina Vuori; Till Milde; Yoon-Jae Cho; Xiao-Nan Li; James M Olson; Iris Reyes; Matija Snuderl; Terence C Wong; David P Dimmock; Shareef A Nahas; Denise Malicki; John R Crawford; Michael L Levy; Eliezer M Van Allen; Stefan M Pfister; Pablo Tamayo
Journal:  Cancer Res       Date:  2020-10-12       Impact factor: 12.701

7.  Calibration of fluorescence imaging for tumor surgical margin delineation: multistep registration of fluorescence and histological images.

Authors:  Yang Jiang; Emily J Girard; Fiona Pakiam; Eric J Seibel
Journal:  J Med Imaging (Bellingham)       Date:  2019-05-11

8.  Patient-derived orthotopic xenograft models of medulloblastoma lack a functional blood-brain barrier.

Authors:  Laura A Genovesi; Simon Puttick; Amanda Millar; Marija Kojic; Pengxiang Ji; Anne K Lagendijk; Caterina Brighi; Claudine S Bonder; Christelle Adolphe; Brandon J Wainwright
Journal:  Neuro Oncol       Date:  2021-05-05       Impact factor: 12.300

9.  Vincristine-induced peripheral neuropathy is driven by canonical NLRP3 activation and IL-1β release.

Authors:  Hana Starobova; Mercedes Monteleone; Christelle Adolphe; Lena Batoon; Cheyenne J Sandrock; Bryan Tay; Jennifer R Deuis; Alexandra V Smith; Alexander Mueller; Evelyn Israel Nadar; Grace Pamo Lawrence; Amanda Mayor; Elissa Tolson; Jean-Pierre Levesque; Allison R Pettit; Brandon J Wainwright; Kate Schroder; Irina Vetter
Journal:  J Exp Med       Date:  2021-05-03       Impact factor: 14.307

10.  Brain Tumor Biobank Development for Precision Medicine: Role of the Neurosurgeon.

Authors:  Emilie Darrigues; Benjamin W Elberson; Annick De Loose; Madison P Lee; Ebonye Green; Ashley M Benton; Ladye G Sink; Hayden Scott; Murat Gokden; John D Day; Analiz Rodriguez
Journal:  Front Oncol       Date:  2021-04-26       Impact factor: 6.244

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.