Literature DB >> 30348315

Review: The Arabidopsis β-amylase (BAM) gene family: Diversity of form and function.

Jonathan D Monroe1, Amanda R Storm2.   

Abstract

Multi-gene families present a rich research area to study how related proteins evolve to acquire new structures and functions. The β-amylase (BAM) gene family is named for catalytic members' ability to hydrolyze starch into maltose units. However, the family also contains proteins that are catalytically inactive, have additional domains, or are not localized with a starch substrate. Here we review the current knowledge of each of the nine Arabidopsis BAMs, including information on their localization, structural features, expression patterns, regulation and potential functions. We also discuss unique characteristics of studying multi-gene families, such as the consideration of different kinetic parameters when performing assays on leaf extracts, and suggest approaches that may be fruitful in learning more about their unique functions.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Multi-gene family; Pseudoenzymes; Starch; Transcription factors; β-amylase (BAM)

Mesh:

Substances:

Year:  2018        PMID: 30348315     DOI: 10.1016/j.plantsci.2018.08.016

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  17 in total

1.  Identification of source-sink tissues in the leaf of Chinese cabbage (Brassica rapa ssp. pekinensis) by carbohydrate content and transcriptomic analysis.

Authors:  Jeongyeo Lee; Xiangshu Dong; Kwan Choi; Hayong Song; Hankuil Yi; Yoonkang Hur
Journal:  Genes Genomics       Date:  2019-10-14       Impact factor: 1.839

2.  Solution structure and assembly of β-amylase 2 from Arabidopsis thaliana.

Authors:  Nithesh P Chandrasekharan; Claire M Ravenburg; Ian R Roy; Jonathan D Monroe; Christopher E Berndsen
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-03-25       Impact factor: 7.652

Review 3.  Regulation of β-amylase synthesis: a brief overview.

Authors:  Moupriya Nag; Dibyajit Lahiri; Sayantani Garai; Dipro Mukherjee; Rina Rani Ray
Journal:  Mol Biol Rep       Date:  2021-08-11       Impact factor: 2.316

4.  Two independent allohexaploidizations and genomic fractionation in Solanales.

Authors:  Yan Zhang; Lan Zhang; Qimeng Xiao; Chunyang Wu; Jiaqi Zhang; Qiang Xu; Zijian Yu; Shoutong Bao; Jianyu Wang; Yu Li; Li Wang; Jinpeng Wang
Journal:  Front Plant Sci       Date:  2022-09-23       Impact factor: 6.627

5.  The BAM7 gene in Zea mays encodes a protein with similar structural and catalytic properties to Arabidopsis BAM2.

Authors:  Claire M Ravenburg; McKayla B Riney; Jonathan D Monroe; Christopher E Berndsen
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-04-08       Impact factor: 5.699

6.  Expression patterns of alpha-amylase and beta-amylase genes provide insights into the molecular mechanisms underlying the responses of tea plants (Camellia sinensis) to stress and postharvest processing treatments.

Authors:  Chuan Yue; Hongli Cao; Hongzheng Lin; Juan Hu; Yijun Ye; Jiamin Li; Zhilong Hao; Xinyuan Hao; Yun Sun; Yajun Yang; Xinchao Wang
Journal:  Planta       Date:  2019-04-25       Impact factor: 4.116

7.  Kalanchoë PPC1 Is Essential for Crassulacean Acid Metabolism and the Regulation of Core Circadian Clock and Guard Cell Signaling Genes.

Authors:  Susanna F Boxall; Nirja Kadu; Louisa V Dever; Jana Kneřová; Jade L Waller; Peter J D Gould; James Hartwell
Journal:  Plant Cell       Date:  2020-02-12       Impact factor: 11.277

8.  Freezing Tolerance and Expression of β-amylase Gene in Two Actinidia arguta Cultivars with Seasonal Changes.

Authors:  Shihang Sun; Jinbao Fang; Miaomiao Lin; Xiujuan Qi; Jinyong Chen; Ran Wang; Zhi Li; Yukuo Li; Abid Muhammad
Journal:  Plants (Basel)       Date:  2020-04-16

9.  Alternative splicing creates a pseudo-strictosidine β-d-glucosidase modulating alkaloid synthesis in Catharanthus roseus.

Authors:  Inês Carqueijeiro; Konstantinos Koudounas; Thomas Dugé de Bernonville; Liuda Johana Sepúlveda; Angela Mosquera; Dikki Pedenla Bomzan; Audrey Oudin; Arnaud Lanoue; Sébastien Besseau; Pamela Lemos Cruz; Natalja Kulagina; Emily A Stander; Sébastien Eymieux; Julien Burlaud-Gaillard; Emmanuelle Blanchard; Marc Clastre; Lucia Atehortùa; Benoit St-Pierre; Nathalie Giglioli-Guivarc'h; Nicolas Papon; Dinesh A Nagegowda; Sarah E O'Connor; Vincent Courdavault
Journal:  Plant Physiol       Date:  2021-04-02       Impact factor: 8.340

10.  Starch content changes and metabolism-related gene regulation of Chinese cabbage synergistically induced by Plasmodiophora brassicae infection.

Authors:  Yinbo Ma; Su Ryun Choi; Yu Wang; Sushil Satish Chhapekar; Xue Zhang; Yingjun Wang; Xueying Zhang; Meiyu Zhu; Di Liu; Zhennan Zuo; Xinyu Yan; Caixia Gan; Di Zhao; Yue Liang; Wenxing Pang; Yong Pyo Lim
Journal:  Hortic Res       Date:  2022-01-19       Impact factor: 7.291

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