Literature DB >> 30344897

Decision Making in Medicinal Chemistry: The Power of Our Intuition.

Laurent Gomez1.   

Abstract

Medicinal chemists rely on their intuition to make decisions regarding the course of a medicinal chemistry program. Our ability to accurately and efficiently process large data sets routinely requires that we reduce the volume of information to manageable proportions. This prioritization process, however, can be affected by intuitive biases. One such situation is structure-activity relationship (SAR) analysis in nonadditive data sets in which attempts to intuitively predict the activity of compounds based on preliminary data can lead to erroneous conclusions. Matrix analysis can be a useful tool to accurately determine the nature of the SAR and to improve our decision-making process during an analoging campaign.

Year:  2018        PMID: 30344897      PMCID: PMC6187401          DOI: 10.1021/acsmedchemlett.8b00359

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  10 in total

1.  Fast calculation of molecular polar surface area as a sum of fragment-based contributions and its application to the prediction of drug transport properties.

Authors:  P Ertl; B Rohde; P Selzer
Journal:  J Med Chem       Date:  2000-10-05       Impact factor: 7.446

2.  Assessment of the consistency of medicinal chemists in reviewing sets of compounds.

Authors:  Michael S Lajiness; Gerald M Maggiora; Veerabahu Shanmugasundaram
Journal:  J Med Chem       Date:  2004-09-23       Impact factor: 7.446

3.  Pyrazole CCK(1) receptor antagonists. Part 1: Solution-phase library synthesis and determination of Free-Wilson additivity.

Authors:  Kelly McClure; Michael Hack; Liming Huang; Clark Sehon; Magda Morton; Lina Li; Terrance D Barrett; Nigel Shankley; J Guy Breitenbucher
Journal:  Bioorg Med Chem Lett       Date:  2005-10-19       Impact factor: 2.823

4.  Pyrazole CCK(1) receptor antagonists. Part 2: SAR studies by solid-phase library synthesis and determination of Free-Wilson additivity.

Authors:  Clark Sehon; Kelly McClure; Michael Hack; Magda Morton; Laurent Gomez; Lina Li; Terrance D Barrett; Nigel Shankley; J Guy Breitenbucher
Journal:  Bioorg Med Chem Lett       Date:  2005-10-19       Impact factor: 2.823

Review 5.  Calculation of molecular lipophilicity: State-of-the-art and comparison of log P methods on more than 96,000 compounds.

Authors:  Raimund Mannhold; Gennadiy I Poda; Claude Ostermann; Igor V Tetko
Journal:  J Pharm Sci       Date:  2009-03       Impact factor: 3.534

6.  Judgment under Uncertainty: Heuristics and Biases.

Authors:  A Tversky; D Kahneman
Journal:  Science       Date:  1974-09-27       Impact factor: 47.728

7.  Mathematical and Structural Characterization of Strong Nonadditive Structure-Activity Relationship Caused by Protein Conformational Changes.

Authors:  Laurent Gomez; Rui Xu; William Sinko; Brandon Selfridge; William Vernier; Kiev Ly; Richard Truong; Markus Metz; Tami Marrone; Kristen Sebring; Yingzhou Yan; Brent Appleton; Kathleen Aertgeerts; Mark Eben Massari; J Guy Breitenbucher
Journal:  J Med Chem       Date:  2018-08-20       Impact factor: 7.446

8.  Inside the mind of a medicinal chemist: the role of human bias in compound prioritization during drug discovery.

Authors:  Peter S Kutchukian; Nadya Y Vasilyeva; Jordan Xu; Mika K Lindvall; Michael P Dillon; Meir Glick; John D Coley; Natasja Brooijmans
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

9.  Strong nonadditivity as a key structure-activity relationship feature: distinguishing structural changes from assay artifacts.

Authors:  Christian Kramer; Julian E Fuchs; Klaus R Liedl
Journal:  J Chem Inf Model       Date:  2015-03-11       Impact factor: 4.956

10.  An information theory account of cognitive control.

Authors:  Jin Fan
Journal:  Front Hum Neurosci       Date:  2014-09-02       Impact factor: 3.169

  10 in total
  2 in total

1.  Improving the odds of success in antitumoral drug development using scoring approaches towards heterocyclic scaffolds.

Authors:  George Nicolae Daniel Ion; Octavian Tudorel Olaru; Georgiana Nitulescu; Iulia Ioana Olaru; Aristidis Tsatsakis; Tatiana I Burykina; Demetrios A Spandidos; George Mihai Nitulescu
Journal:  Oncol Rep       Date:  2020-06-05       Impact factor: 3.906

2.  On drug discovery against infectious diseases and academic medicinal chemistry contributions.

Authors:  Yves L Janin
Journal:  Beilstein J Org Chem       Date:  2022-09-29       Impact factor: 2.544

  2 in total

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