Literature DB >> 30343901

Expanding the Optogenetics Toolkit by Topological Inversion of Rhodopsins.

Jennifer Brown1, Reza Behnam2, Luke Coddington2, D G R Tervo2, Kathleen Martin2, Mikhail Proskurin3, Elena Kuleshova4, Junchol Park2, James Phillips1, Amelie C F Bergs5, Alexander Gottschalk6, Joshua T Dudman7, Alla Y Karpova8.   

Abstract

Targeted manipulation of activity in specific populations of neurons is important for investigating the neural circuit basis of behavior. Optogenetic approaches using light-sensitive microbial rhodopsins have permitted manipulations to reach a level of temporal precision that is enabling functional circuit dissection. As demand for more precise perturbations to serve specific experimental goals increases, a palette of opsins with diverse selectivity, kinetics, and spectral properties will be needed. Here, we introduce a novel approach of "topological engineering"-inversion of opsins in the plasma membrane-and demonstrate that it can produce variants with unique functional properties of interest for circuit neuroscience. In one striking example, inversion of a Channelrhodopsin variant converted it from a potent activator into a fast-acting inhibitor that operates as a cation pump. Our findings argue that membrane topology provides a useful orthogonal dimension of protein engineering that immediately permits as much as a doubling of the available toolkit.
Copyright © 2018 Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 30343901     DOI: 10.1016/j.cell.2018.09.026

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  11 in total

1.  Systems Neuroscience of Natural Behaviors in Rodents.

Authors:  Emily Jane Dennis; Ahmed El Hady; Angie Michaiel; Ann Clemens; Dougal R Gowan Tervo; Jakob Voigts; Sandeep Robert Datta
Journal:  J Neurosci       Date:  2020-12-18       Impact factor: 6.167

2.  Rhodopsin-Based Optogenetics: Basics and Applications.

Authors:  Alexey Alekseev; Valentin Gordeliy; Ernst Bamberg
Journal:  Methods Mol Biol       Date:  2022

3.  An adaptive tracking illumination system for optogenetic control of single bacterial cells.

Authors:  Aiguo Xia; Rongrong Zhang; Yajia Huang; Lei Ni; Lu Pu; Ye Li; Shuai Yang; Fan Jin
Journal:  Appl Microbiol Biotechnol       Date:  2022-09-21       Impact factor: 5.560

4.  Tapered fibertrodes for optoelectrical neural interfacing in small brain volumes with reduced artefacts.

Authors:  Barbara Spagnolo; Antonio Balena; Rui T Peixoto; Marco Pisanello; Leonardo Sileo; Marco Bianco; Alessandro Rizzo; Filippo Pisano; Antonio Qualtieri; Dario Domenico Lofrumento; Francesco De Nuccio; John A Assad; Bernardo L Sabatini; Massimo De Vittorio; Ferruccio Pisanello
Journal:  Nat Mater       Date:  2022-06-06       Impact factor: 47.656

Review 5.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

6.  Optogenetic Control of Heart Rhythm: Lightly Guiding the Cardiac Pace.

Authors:  Lolita Dokshokova; Nicola Pianca; Tania Zaglia; Marco Mongillo
Journal:  Methods Mol Biol       Date:  2022

7.  Time-resolved spectroscopic and electrophysiological data reveal insights in the gating mechanism of anion channelrhodopsin.

Authors:  Max-Aylmer Dreier; Philipp Althoff; Mohamad Javad Norahan; Stefan Alexander Tennigkeit; Samir F El-Mashtoly; Mathias Lübben; Carsten Kötting; Till Rudack; Klaus Gerwert
Journal:  Commun Biol       Date:  2021-05-14

8.  Spatiotemporal constraints on optogenetic inactivation in cortical circuits.

Authors:  Nuo Li; Susu Chen; Zengcai V Guo; Han Chen; Yan Huo; Hidehiko K Inagaki; Guang Chen; Courtney Davis; David Hansel; Caiying Guo; Karel Svoboda
Journal:  Elife       Date:  2019-11-18       Impact factor: 8.140

9.  A unified evolutionary origin for the ubiquitous protein transporters SecY and YidC.

Authors:  Aaron J O Lewis; Ramanujan S Hegde
Journal:  BMC Biol       Date:  2021-12-15       Impact factor: 7.431

10.  Colocalized, bidirectional optogenetic modulations in freely behaving mice with a wireless dual-color optoelectronic probe.

Authors:  Lizhu Li; Lihui Lu; Yuqi Ren; Guo Tang; Yu Zhao; Xue Cai; Zhao Shi; He Ding; Changbo Liu; Dali Cheng; Yang Xie; Huachun Wang; Xin Fu; Lan Yin; Minmin Luo; Xing Sheng
Journal:  Nat Commun       Date:  2022-02-11       Impact factor: 14.919

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