| Literature DB >> 30319565 |
Vanessa David-Vaizant1,2, Hervé Alexandre1,2.
Abstract
Wine biological aging is characterized by the development of yeast strains that form a biofilm on the wine surface after alcoholic fermentation. These yeasts, known as flor yeasts, form a velum that protects the wine from oxidation during aging. Thirty-nine velums aged from 1 to 6 years were sampled from "Vin jaune" from two different cellars. We show for the first time that these velums possess various aspects in term of color and surface aspects. Surprisingly, the heterogeneous velums are mostly composed of one species, S. cerevisiae. Scanning electron microscope observations of these velums revealed unprecedented biofilm structures and various yeast morphologies formed by the sole S. cerevisiae species. Our results highlight that different strains of Saccharomyces are present in these velums. Unexpectedly, in the same velum, flor yeast strain succession occurred during aging, supporting the assumption that environmental changes are responsible for these shifts. Despite numerous sample wine analyses, very few flor yeasts could be isolated from wine following alcoholic fermentation, suggesting that flor yeast development results from the colonization of yeast present in the aging cellar. We analyzed the FLO11 and ICR1 sequence of different S. cerevisiae strains in order to understand how the same strain of S. cerevisiae could form various types of biofilm. Among the strains analyzed, some were heterozygote at the FLO11 locus, while others presented two different alleles of ICR1 (wild type and a 111 bp deletion). We could not find a strong link between strain genotypes and velum characteristics. The same strain in different wines could form a velum having very different characteristics, highlighting a matrix effect.Entities:
Keywords: FLO11; Saccharomyces cerevisiae; biofilm; flor yeast; scanning electron microscopy; vin jaune; wine
Year: 2018 PMID: 30319565 PMCID: PMC6167421 DOI: 10.3389/fmicb.2018.02235
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Identification of wine and velum yeast by different molecular techniques (5,8S PCR and 26S DGGE).
| Wine estates | Sample wine velum | PCR ITS 5,8S | DGGE 26S |
|---|---|---|---|
| A | W1AF | ||
| W1 | |||
| Ascomycota | |||
| A | W2AF | ||
| W2 | |||
| A | W3AF | ||
| W3 | |||
| A | V4 | ||
| A | V5 | ||
| A | V6 | ||
| A | V7 | ||
| A | V8 | ||
| A | V9 | ||
| A | V10 | ||
| A | V11 | ||
| A | V12 | ||
| A | V13 | ||
| A | V14 | ||
| A | V15 | ||
| A | V16 | ||
| A | V17 | ||
| B | W18AF | ||
| W18 | |||
| B | V19 | ||
| B | V20 | ||
| B | V21 | Ascomycota∗ | |
| B | V22 | Ascomycota∗ | |
| B | V23 | Ascomycota∗ | |
| B | V24 | / | |
| B | V25 | / | |
| B | V26 | ||
| Ascomycota∗ | |||
| B | V27 | ||
| B | V28 | ||
| B | V29 | ||
| B | V30 | ||
| B | V31 | ||
| B | V32 | ||
| B | V33 | ||
| B | V34 | ||
| B | V35 | ||
| B | V36 | ||
| B | V37 | ||
| B | V38 | ||
| B | V39 | ||
| B | V40 | ||
| B | V41 |
Identification of all the Saccharomyces cerevisiae strains isolated in all the velum according to their ITS RFLP profile.
| Wine estates | Sample wine velum | ||
|---|---|---|---|
| Velum | Fermentation | ||
| A | W1AF | S31f, S1f, S3f, S8f, S1Of, S11f, S12f, S24f, S26f | |
| Wl | S1v, S8v, S11v, S12v, S38v | S13f, S14f, S15f, S31f | |
| A | W2AF | S31f, S1f, S2f, S3f, S5f, S6f, S7f, S8f, S16f, S23f, S25f, S27f | |
| W2 | S1v, S8v, S11v, S12v, S38v | ||
| A | W3AF | S31f, S13f, S3f, S4f, S16f, S17f, S18f, S19f, S20f, S21f, S22f, S25f | |
| W3 | S1v, S8v, S11v, S12v, S38v | ||
| A | V4 | S1v, S2v, S5v, S32v | |
| A | V5 | S1v, S2v | |
| A | V6 | S2v | |
| A | V7 | / | |
| A | V8 | S6v | |
| A | V9 | / | |
| A | V10 | / | |
| A | V11 | S3v, S6v | |
| A | V12 | S2v | S9f |
| A | V13 | / | |
| A | V14 | S2v, S26v | S9f |
| A | V15 | S10v, S17v, S37v | |
| A | V16 | S10v | |
| A | V17 | S1v, S27v | |
| B | W18AF | S28f, S29f | |
| W18 | S18v, S19v, S20v, S21v, S22v, S23v, S36v | ||
| B | V19 | S7v | |
| B | V20 | S3v | |
| B | V21 | S3v, S4v | |
| B | V22 | S34v | |
| B | V23 | S7v, S28v, S34v | |
| B | V24 | S3v | |
| B | V25 | S3v, S4v | |
| B | V26 | S24v | |
| B | V27 | S4v | |
| B | V28 | S2v, S6v | |
| B | V29 | S2v, S5v, S35v | |
| B | V30 | S2v, S5v, S35v | |
| B | V31 | S3v, S33v, S34v | |
| B | V32 | / | |
| B | V33 | S4v, S29v | |
| B | V34 | S3v | |
| B | V35 | S3v, S24v | |
| B | V36 | S4v, S30v | |
| B | V37 | S25v | |
| B | V38 | S34v | |
| B | V39 | / | |
| B | V40 | / | |
| B | V41 | / | |
Example of the distribution (%) of different Saccharomyces cerevisiae genotypes present in velum (V) showing that several different Saccharomyces cerevisiae strains could be present in a same velum.
| Velum | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| V4 | V11 | V14 | V15 | V23 | V28 | V29 | V30 | V31 | ||
| S1v | 88 | |||||||||
| S2v | 81 | 71 | 90 | 75 | ||||||
| S3v | 34 | 84 | ||||||||
| S5v | 8 | 10 | ||||||||
| S6v | 66 | 29 | 25 | |||||||
| S9f | 13 | |||||||||
| S26v | 6 | |||||||||
| S28v | 50 | |||||||||
| S32v | 4 | |||||||||
| S33v | 16 | |||||||||
| S34v | 50 | |||||||||
Example of the distribution (%) of different Saccharomyces cerevisiae genotypes present in velum (V) showing the shift from one strain to another according to the season.
| Season | Slv | S2v | S8v | S28v | S24v | S3v | S6v | S27v | S7v | S34v | S29v | S4v | S5v | S33v | S30v | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Velum | V5 | W | 100 | ||||||||||||||
| S | 100 | ||||||||||||||||
| A | 100 | ||||||||||||||||
| V23 | W | 100 | |||||||||||||||
| A | 50 | 50 | |||||||||||||||
| V12 | S | 34 | 66 | ||||||||||||||
| A | 100 | ||||||||||||||||
| V17 | S | 100 | |||||||||||||||
| A | 100 | ||||||||||||||||
| V23 | W | 100 | |||||||||||||||
| A | 50 | 50 | |||||||||||||||
| V25 | W | 100 | |||||||||||||||
| S | 100 | ||||||||||||||||
| V31 | S | 84 | 16 | ||||||||||||||
| A | 100 | ||||||||||||||||
| V33 | S | 100 | |||||||||||||||
| A | 100 | ||||||||||||||||
| V35 | S | 100 | |||||||||||||||
| A | 100 | ||||||||||||||||
| V36 | S | 100 | |||||||||||||||
| A | 100 | ||||||||||||||||
Example of different Saccharomyces cerevisiae genotypes isolated in velum with different colors.
| Velum color | S2v | S3v | S4v | S5v | S6v | S7v | S24v | S34v |
|---|---|---|---|---|---|---|---|---|
| White | X | X | X | X | X | |||
| V4, V5, V20, V24, V25,V31, V35, V36 | ||||||||
| Gray | X | X | X | X | X | |||
| V6, V12, V19, V14, V23,V27, V33, V8, V22 | ||||||||
| Cream | X | X | X | X | ||||
| V11, V28, V29, V30, V34 | ||||||||
| Brown | X | |||||||
| V34 | ||||||||
| Yellow | X | X | ||||||
| V21 | ||||||||
| Black | X | |||||||
| V26 | ||||||||
FLO11 promoter size and ORF length variations, velum color and thickness of various flor strains [55 clones belonging to 38 genotypes (S1v to S38v)].
| Velum yeast | Strain | Velum color | Velum thickness | |||
|---|---|---|---|---|---|---|
| Promoter | ||||||
| Lab reference | 447 bp | 3,300 bp | ||||
| 447 bp | 3,500 bp | White | Fine | |||
| 447 bp | 3,500 bp | nv | ||||
| 447 bp | 3,500 bp | nv | ||||
| S1v | 447 bp + 350 bp | 3,500 bp | White | Fine | ||
| 447 bp + 350 bp | 3,400 bp + 4,100 bp | Cream | Fine | |||
| 447 bp + 350 bp | 3,400 bp + 4,100 bp | nv | ||||
| 447 bp + 350 bp | 3,400 bp + 4,200 bp | nv | ||||
| 350 bp | 3,500 bp | Gray | Fine | |||
| 350 bp | 3,500 bp | Gray | Fine | |||
| 447 bp + 350 bp | 6,200 bp | White | Fine | |||
| S2v | 447 bp + 350 bp | 6,200 bp | Black | Fine | ||
| 447 bp + 350 bp | 6,200 bp | Cream | Thick | |||
| 447 bp + 350 bp | 6,200 bp | Cream | Thick | |||
| 447 bp + 350 bp | 6,200 bp | White | Fine | |||
| 350 bp | 3,500 bp | Brown | / | |||
| 350 bp | 4,500 bp | Cream | Thick | |||
| S3v | 350 bp | 4,500 bp | White | Thick | ||
| 350 bp | 5,000 bp | White | / | |||
| 350 bp | 4,500 bp | Yellow | Thick | |||
| 350 bp | 3,500 bp | Gray | Thick | |||
| S4v | 350 bp | 3,700 bp | White | Thick | ||
| 350 bp | 3,500 bp | Gray | Fine | |||
| S5v | 447 bp + 350 bp | 3,300 bp | Cream | Fine | ||
| S6v | 447 bp | 3,600 bp | Gray | Fine | ||
| 11.16F | 447 bp | 3,600 bp | Cream | Thick | ||
| S7v | 350 bp | 3,700 bp | Gray | Fine | ||
| S8v | 447 bp | 3,500 bp | nv | |||
| S9f | 447 bp | 2,300 bp + 2,900 bp | Gray | Fine | ||
| 447 bp | 2,300 bp + 2,900 bp | Black | Fine | |||
| S10v | 350 bp | 4,200 bp | White | Thick | ||
| S11v | 447 bp | 4,800 bp | nv | |||
| 447 bp | 3,500 bp | nv | ||||
| S12v | 447 bp | 3,700 bp | nv | |||
| 447 bp | 3,500 bp + 4,700 bp | nv | ||||
| 447 bp | 3,700 bp | nv | ||||
| S16v | 447 bp | 4,200 bp | nv | |||
| S17v | 340 bp | 3,500 bp | White | Thick | ||
| S18v | 447 bp | 3,500 bp + 4,200 bp | nv | |||
| S19v | 447 bp | 4,200 bp | nv | |||
| S20v | 447 bp | 3,500 bp | nv | |||
| S21v | 447 bp | 4,000 bp + 4,200 bp | nv | |||
| S22v | 447 bp | 3,400 bp + 4,200 bp | nv | |||
| S23v | 447 bp | 3,400 bp + 4,200 bp | nv | |||
| S25v | 340 bp | 4,200 bp + 4,300 bp | White | / | ||
| S26v | 340 bp | 4,200 bp + 4,300 bp | Gray | Fine | ||
| S27v | 447 bp + 350 bp | 3,200 bp + 4,500 bp | Cream | Thick | ||
| S28v | 340 bp | 2,800 bp | Gray | Fine | ||
| S29v | 340 bp | 3,200 bp | Gray | Thick | ||
| S30v | 447 bp | 3,100 bp + 3,500 bp | White | Thick | ||
| S32v | 447 bp + 350 bp | 3,400 bp + 4,100 bp | White | / | ||
| 350 bp | 4,500 + 4,700 bp | Gray | Fine | |||
| S34v | 350 bp | 4,800 bp | White | Fine | ||
| 447 bp + 350 bp | 3,400 + 3,600 bp | White | Thick | |||
| S36v | 350 bp | 3,700 bp | White | Fine | ||
| S38v | 447 bp | 4,000 bp + 4,200 bp | nv | |||