Literature DB >> 30318491

Recent Progress in Chemical Modification of Proteins.

Seiji Sakamoto1, Itaru Hamachi1,2.   

Abstract

Chemical modification of proteins is important for creating a myriad of engineered proteins and for elucidating the function and dynamics of proteins in live cells. A wide variety of chemical protein modification methods have been developed and can be categorized into three classes: (i) modification of proteins using the reactivity of naturally occurring amino acids; (ii) modification by bioorthogonal reactions using unnatural amino acids, most of which can be site-selectively incorporated into proteins-of-interest using genetic codon expansion techniques; and (iii) recognition driven chemical modification, which is the only approach that allows modification of endogenous proteins without any genetic manipulation even under heavily crowded and multi-molecular conditions, as in live cells and organisms. All of these approaches have merits and limitations. In this review, we summarize these approaches and discuss their characteristics with respect to specificity, reaction rate and versatility.

Keywords:  Protein chemical modification; affinity-guided catalyst chemistry; ligand-directed chemistry; recognition driven protein labeling; site-selective protein modification

Mesh:

Substances:

Year:  2018        PMID: 30318491     DOI: 10.2116/analsci.18R003

Source DB:  PubMed          Journal:  Anal Sci        ISSN: 0910-6340            Impact factor:   2.081


  10 in total

1.  Optimization of sortase A ligation for flexible engineering of complex protein systems.

Authors:  Jess Li; Yue Zhang; Olivier Soubias; Domarin Khago; Fa-An Chao; Yifei Li; Katherine Shaw; R Andrew Byrd
Journal:  J Biol Chem       Date:  2020-01-23       Impact factor: 5.157

Review 2.  Paramagnetic Chemical Probes for Studying Biological Macromolecules.

Authors:  Qing Miao; Christoph Nitsche; Henry Orton; Mark Overhand; Gottfried Otting; Marcellus Ubbink
Journal:  Chem Rev       Date:  2022-01-27       Impact factor: 72.087

3.  Activity-Based Sensing with a Metal-Directed Acyl Imidazole Strategy Reveals Cell Type-Dependent Pools of Labile Brain Copper.

Authors:  Sumin Lee; Clive Yik-Sham Chung; Pei Liu; Laura Craciun; Yuki Nishikawa; Kevin J Bruemmer; Itaru Hamachi; Kaoru Saijo; Evan W Miller; Christopher J Chang
Journal:  J Am Chem Soc       Date:  2020-08-20       Impact factor: 15.419

4.  Site-specific covalent labeling of His-tag fused proteins with N-acyl-N-alkyl sulfonamide reagent.

Authors:  Vikram Thimaradka; Jae Hoon Oh; Christina Heroven; A Radu Aricescu; Michisuke Yuzaki; Tomonori Tamura; Itaru Hamachi
Journal:  Bioorg Med Chem       Date:  2020-12-16       Impact factor: 3.641

Review 5.  Chemical modifications of proteins and their applications in metalloenzyme studies.

Authors:  Nathchar Naowarojna; Ronghai Cheng; Juan Lopez; Christina Wong; Lu Qiao; Pinghua Liu
Journal:  Synth Syst Biotechnol       Date:  2021-02-15

6.  Structural Requirements for the Binding of a Peptide to Prohibitins on the Cell Surface of Monocytes/Macrophages.

Authors:  Qindong Zhang; Anniken Olberg; Mouldy Sioud
Journal:  Int J Mol Sci       Date:  2022-04-13       Impact factor: 6.208

7.  Global chemical modifications comparison of human plasma proteome from two different age groups.

Authors:  Yongtao Liu; Xuanzhen Pan; Mindi Zhao; Youhe Gao
Journal:  Sci Rep       Date:  2020-09-14       Impact factor: 4.379

8.  Ligand-directed covalent labelling of a GPCR with a fluorescent tag in live cells.

Authors:  Leigh A Stoddart; Nicholas D Kindon; Omolade Otun; Clare R Harwood; Foteini Patera; Dmitry B Veprintsev; Jeanette Woolard; Stephen J Briddon; Hester A Franks; Stephen J Hill; Barrie Kellam
Journal:  Commun Biol       Date:  2020-11-27

9.  Affinity for the Interface Underpins Potency of Antibodies Operating In Membrane Environments.

Authors:  Edurne Rujas; Sara Insausti; Daniel P Leaman; Pablo Carravilla; Saul González-Resines; Valérie Monceaux; Rubén Sánchez-Eugenia; Miguel García-Porras; Ibon Iloro; Lei Zhang; Félix Elortza; Jean-Philippe Julien; Asier Saéz-Cirión; Michael B Zwick; Christian Eggeling; Akio Ojida; Carmen Domene; Jose M M Caaveiro; José L Nieva
Journal:  Cell Rep       Date:  2020-08-18       Impact factor: 9.423

10.  An overview of chemo- and site-selectivity aspects in the chemical conjugation of proteins.

Authors:  Charlotte Sornay; Valentine Vaur; Alain Wagner; Guilhem Chaubet
Journal:  R Soc Open Sci       Date:  2022-01-26       Impact factor: 2.963

  10 in total

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