Literature DB >> 30316538

Long intergenic noncoding RNAs in cardiovascular diseases: Challenges and strategies for physiological studies and translation.

Xuan Zhang1, Daniel Y Li1, Muredach P Reilly2.   

Abstract

Long intergenic noncoding RNAs (lincRNAs) are increasingly recognized as important mediators of many biological processes relevant to human pathophysiologies, including cardiovascular diseases. In vitro studies have provided important knowledge of cellular functions and mechanisms for an increasing number of lincRNAs. Dysregulated lncRNAs have been associated with cell fate programming and development, vascular diseases, atherosclerosis, dyslipidemia and metabolic syndrome, and cardiac pathological hypertrophy. However, functional interrogation of individual lincRNAs in physiological and disease states is largely limited. The complex nature of lincRNA actions and poor species conservation of human lincRNAs pose substantial challenges to physiological studies in animal model systems and in clinical translation. This review summarizes recent findings of specific lincRNA physiological studies, including MALAT1, MeXis, Lnc-DC and others, in the context of cardiovascular diseases, examines complex mechanisms of lincRNA actions, reviews in vivo research strategies to delineate lincRNA functions and highlights challenges and approaches for physiological studies of primate-specific lincRNAs.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Animal models; Cardiovascular diseases; Long intergenic noncoding RNAs

Mesh:

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Year:  2018        PMID: 30316538      PMCID: PMC7307970          DOI: 10.1016/j.atherosclerosis.2018.09.040

Source DB:  PubMed          Journal:  Atherosclerosis        ISSN: 0021-9150            Impact factor:   5.162


  109 in total

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Authors:  Bijan K Dey; Adam C Mueller; Anindya Dutta
Journal:  Transcription       Date:  2014-10-30

2.  Targeted disruption of Hotair leads to homeotic transformation and gene derepression.

Authors:  Lingjie Li; Bo Liu; Orly L Wapinski; Miao-Chih Tsai; Kun Qu; Jiajing Zhang; Jeff C Carlson; Meihong Lin; Fengqin Fang; Rajnish A Gupta; Jill A Helms; Howard Y Chang
Journal:  Cell Rep       Date:  2013-09-26       Impact factor: 9.423

3.  FXR activation by obeticholic acid or nonsteroidal agonists induces a human-like lipoprotein cholesterol change in mice with humanized chimeric liver.

Authors:  Romeo Papazyan; Xueqing Liu; Jingwen Liu; Bin Dong; Emily M Plummer; Ronald D Lewis; Jonathan D Roth; Mark A Young
Journal:  J Lipid Res       Date:  2018-03-20       Impact factor: 5.922

4.  Identification and characterization of developmentally regulated genes in vascular smooth muscle cells.

Authors:  D K Han; G Liau
Journal:  Circ Res       Date:  1992-09       Impact factor: 17.367

5.  The primate-specific noncoding RNA HPAT5 regulates pluripotency during human preimplantation development and nuclear reprogramming.

Authors:  Jens Durruthy-Durruthy; Vittorio Sebastiano; Mark Wossidlo; Diana Cepeda; Jun Cui; Edward J Grow; Jonathan Davila; Moritz Mall; Wing H Wong; Joanna Wysocka; Kin Fai Au; Renee A Reijo Pera
Journal:  Nat Genet       Date:  2015-11-23       Impact factor: 38.330

6.  A long noncoding RNA associated with susceptibility to celiac disease.

Authors:  Ainara Castellanos-Rubio; Nora Fernandez-Jimenez; Radomir Kratchmarov; Xiaobing Luo; Govind Bhagat; Peter H R Green; Robert Schneider; Megerditch Kiledjian; Jose Ramon Bilbao; Sankar Ghosh
Journal:  Science       Date:  2016-04-01       Impact factor: 47.728

7.  Long Noncoding RNA Facilitated Gene Therapy Reduces Atherosclerosis in a Murine Model of Familial Hypercholesterolemia.

Authors:  Peter Tontonoz; Xiaohui Wu; Marius Jones; Zhengyi Zhang; David Salisbury; Tamer Sallam
Journal:  Circulation       Date:  2017-08-22       Impact factor: 29.690

8.  The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r.

Authors:  Andrew Keniry; David Oxley; Paul Monnier; Michael Kyba; Luisa Dandolo; Guillaume Smits; Wolf Reik
Journal:  Nat Cell Biol       Date:  2012-06-10       Impact factor: 28.824

9.  Feedback modulation of cholesterol metabolism by the lipid-responsive non-coding RNA LeXis.

Authors:  Tamer Sallam; Marius C Jones; Thomas Gilliland; Li Zhang; Xiaohui Wu; Ascia Eskin; Jaspreet Sandhu; David Casero; Thomas Q de Aguiar Vallim; Cynthia Hong; Melanie Katz; Richard Lee; Julian Whitelegge; Peter Tontonoz
Journal:  Nature       Date:  2016-05-11       Impact factor: 49.962

10.  Extracellular vesicle-mimetic nanovesicles transport LncRNA-H19 as competing endogenous RNA for the treatment of diabetic wounds.

Authors:  Shi-Cong Tao; Bi-Yu Rui; Qi-Yang Wang; Ding Zhou; Yang Zhang; Shang-Chun Guo
Journal:  Drug Deliv       Date:  2018-11       Impact factor: 6.419

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  12 in total

1.  Determination of Optimum Ratio of Cationic Polymers and Small Interfering RNA with Agarose Gel Retardation Assay.

Authors:  Omer Aydin; Dilek Kanarya; Ummugulsum Yilmaz; Cansu Ümran Tunç
Journal:  Methods Mol Biol       Date:  2022

2.  MALAT1 regulates hypertrophy of cardiomyocytes by modulating the miR-181a/HMGB2 pathway.

Authors:  Feng Chen; Wenfeng Li; Dandan Zhang; Youlin Fu; Wenjin Yuan; Gang Luo; Fuwei Liu; Jun Luo
Journal:  Eur J Histochem       Date:  2022-06-21       Impact factor: 1.966

3.  Cis-regulated expression of non-conserved lincRNAs associates with cardiometabolic related traits.

Authors:  Muredach P Reilly; Andrea S Foulkes; Tingyi Cao; Marcella E O'Reilly; Caitlin Selvaggi; Esther Cynn; Heidi Lumish; Chenyi Xue; Anjali Jha
Journal:  J Hum Genet       Date:  2022-01-11       Impact factor: 3.755

Review 4.  Long noncoding RNAs-a new dimension in the molecular architecture of the bile acid/FXR pathway.

Authors:  Yonghe Ma; Jamie Harris; Ping Li; Haiming Cao
Journal:  Mol Cell Endocrinol       Date:  2021-02-01       Impact factor: 4.102

5.  Targeting Human lncRNAs for Treating Cardiometabolic Diseases.

Authors:  Xiangbo Ruan
Journal:  Cardiovasc Drugs Ther       Date:  2021-02-20       Impact factor: 3.947

6.  LncRNA TUG1 regulates ApoM to promote atherosclerosis progression through miR-92a/FXR1 axis.

Authors:  Liu Yang; Tie Li
Journal:  J Cell Mol Med       Date:  2020-06-28       Impact factor: 5.310

7.  ncRNA2MetS: a manually curated database for non-coding RNAs associated with metabolic syndrome.

Authors:  Dengju Yao; Xiaojuan Zhan; Xiaorong Zhan; Chee Keong Kwoh; Yuezhongyi Sun
Journal:  PeerJ       Date:  2019-10-15       Impact factor: 2.984

8.  Nonconserved Long Intergenic Noncoding RNAs Associate With Complex Cardiometabolic Disease Traits.

Authors:  Andrea S Foulkes; Caitlin Selvaggi; Tingyi Cao; Marcella E O'Reilly; Esther Cynn; Puyang Ma; Heidi Lumish; Chenyi Xue; Muredach P Reilly
Journal:  Arterioscler Thromb Vasc Biol       Date:  2020-11-12       Impact factor: 8.311

9.  Systematic analysis of long non-coding RNA and mRNA expression changes in ApoE-deficient mice during atherosclerosis.

Authors:  Xiaoqian Lou; Xiaoyan Ma; Dawei Wang; Xiangjun Li; Bo Sun; Tong Zhang; Meng Qin; Liqun Ren
Journal:  Mol Cell Biochem       Date:  2019-08-24       Impact factor: 3.396

10.  Epigenetic Mechanisms in Diabetic Vascular Complications and Metabolic Memory: The 2020 Edwin Bierman Award Lecture.

Authors:  Rama Natarajan
Journal:  Diabetes       Date:  2021-02       Impact factor: 9.461

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