| Literature DB >> 30310134 |
Ayesha Iqbal1, Saqib Hussain Ansari2, Sadia Parveen2, Ishtiaq Ahmad Khan1, Amna Jabbar Siddiqui3, Syed Ghulam Musharraf4,5.
Abstract
Augmentation of fetal hemoglobin (HbF) production has been an enduring therapeutic objective in β-thalassemia patients for which hydroxyurea (HU) has largely been the drug of choice and the most cost-effective approach. A serum metabolomics study on 40 patients with β-thalassemia prior to and after administration of HU was done along with healthy controls. Treated patients were divided further into non-responders (NR), partial (PR) and good (GR) per their response. 25 metabolites that were altered before HU therapy at p ≤ 0.05 and fold change >2.0 in β-thalassemia patients; started reverting towards healthy group after HU treatment. A prediction model based on another set of 70 HU treated patients showed a good separation of GR from untreated β-thalassemia patients with an overall accuracy of 76.37%. Metabolic pathway analysis revealed that various important pathways that were disturbed in β-thalassemia were reverted after treatment with HU and among them linoleic acid pathway was most impactfully improved in HU treated patients which is a precursor of important signaling molecules. In conclusion, this study indicates that HU is a good treatment option for β-thalassemia patients because in addition to reducing blood transfusion burden it also ameliorates disease complications by shifting body metabolism towards normal.Entities:
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Year: 2018 PMID: 30310134 PMCID: PMC6182004 DOI: 10.1038/s41598-018-33540-6
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Pattern of the significantly differentiated 25 metabolites at FC > 2 in β-thalassemia patients before and after HU therapy along with healthy group as control, plotted on average intensity values of each metabolite.
Figure 2Plot of log FC (fold change) of each significantly altered metabolite in GR, PR, NR and healthy group against their sample before treatment with HU.
Summary of Tukey HSD post hoc test representing differentiated and common metabolites among hydroxyurea (HU) untreated, healthy controls, good responders (GR), partial responders (PR) and non-responders (NR).
| Group Name | GR | Untreated | Healthy | PR | NR |
|---|---|---|---|---|---|
| GR | 25 | 18* | 3* | 7* | 4* |
| Untreated | 7** | 25 | 9* | 15* | 13* |
| Healthy | 22** | 16** | 25 | 4* | 2* |
| PR | 18** | 10** | 21** | 25 | 7* |
| NR | 21** | 12** | 23** | 18** | 25 |
* represent the differentially expressed metabolites between the groups.
** represents the undifferentiated metabolites among groups.
Figure 3Hierarchical clustering dendogram showing comparison of five groups of samples i.e. healthy controls, β-thalassemia patients without HU treatment, GR (good responders), PR (partial responders) and NR (non-responders) to HU therapy. Note that GR group is least dissimilar to healthy group.
Figure 43D Partial Least Square-Discriminant Analysis (PLSDA) score plot based on the differentiating metabolite profile data of serum of five groups showing a noteworthy separation trend between the GR and healthy to HU untreated and NR group while PR was the most dispersed group.
Results of PLS-DA prediction model generated in the form of confusion matrix consisting of HU untreated β-thalassemia patients (n = 64), HU treated three groups of β-thalassemia patients i.e. GR (n = 25), PR (n = 23), NR (n = 22) and healthy controls (n = 61).
| ΒTT GR Predicted | BTT NR Predicted | BTT PR Predicted | BTUT Predicted | Healthy Predicted | Accuracy | |
|---|---|---|---|---|---|---|
| True BTT GR | 17 | 0 | 03 | 00 | 05 | 68.000 |
| True BTT NR | 00 | 15 | 02 | 05 | 00 | 68.182 |
| True BTT PR | 05 | 09 | 03 | 02 | 04 | 13.043 |
| True BTUT | 00 | 00 | 00 | 64 | 00 | 100.000 |
| True Healthy | 07 | 00 | 01 | 00 | 40 | 83.333 |
| Overall Accuracy | 76.374 | |||||
BTT (β-Thalassemia Treated with Hydroxyurea), GR (Good Responders), PR (Partial Responders), NR (Non-esponders) & BTUT (β-Thalassemia Untreated with Hydroxyurea).
Figure 5Summary of pathway analysis of metabolites that were dysregulated in β-thalassemia patients before treatment with HU as compared to healthy controls and after treatment with HU.