| Literature DB >> 30307563 |
Marina Antillon1,2, Neil J Saad1, Stephen Baker3, Andrew J Pollard4, Virginia E Pitzer1.
Abstract
Background: Blood culture is the standard diagnostic method for typhoid and paratyphoid (enteric) fever in surveillance studies and clinical trials, but sensitivity is widely acknowledged to be suboptimal. We conducted a systematic review and meta-analysis to examine sources of heterogeneity across studies and quantified the effect of blood volume.Entities:
Mesh:
Year: 2018 PMID: 30307563 PMCID: PMC6226661 DOI: 10.1093/infdis/jiy471
Source DB: PubMed Journal: J Infect Dis ISSN: 0022-1899 Impact factor: 5.226
Figure 1.Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) diagram for systematic review. A systematic search in 6 databases yielded 3502 articles, or 2310 unique articles, 86 of which were eligible for full-text review. A total of 40 studies were included in the descriptive synthesis, and 25 studies had blood volume information and were included in our meta-regression analysis of the relationship between blood sample volume and blood culture sensitivity.
Study Characteristicsa
| Study (Language, if Other Than English) | Location | Typhi, Paratyphi Included | Eligibility Criteria | Inpatients or Outpatients | Age Distribution of the Sample (in Years)c | How Long the Blood Was Incubated | Broth Used to Culture the Blood | Agar Used to Subculture the Blood | Other Cultures |
|---|---|---|---|---|---|---|---|---|---|
| Akoh 1991 [13] | Zaria, Nigeria | Typhi | Clinical suspicion | Inpatient | Not reported | Not reported | Thioglycolate | Not reported | Urine and stool |
| Avendano 1986 [14] | Santiago, Chile | Typhi, Paratyphi | Clinical suspicion | Inpatient | Children (ages 3–14) | Not reported | Brain heart infusion with sodium polyanetholsulfonate |
| Bile |
| Baqi Durrani 1996 [15] | Karachi, Pakistan | Typhi, Paratyphi | Clinical suspicion or 4× rise in titers | Both | Older children (ages 5–20) | 7 days | Thioglycolate | Sheep’s blood, MacConkey’s, | |
| Barbagallo 1938 (Italian) [16] | Catania, Italy | Typhi, Paratyphi | Clinical suspicion | Inpatient | Not reported | Not reported | Oxoid (trypticase-soy broth) | MacConkey’s, triple sugar iron | |
| Bassily 1980a[17] | Cairo, Egypt | Typhi, Paratyphi | Patients suspected to have chronic salmonellosis | Inpatient | Older children (ages 10–18) | Not reported | Oxgall (oxbile) | Not reported | Urine culture, data not shown |
| Benavente 1981 [18] | Lima, Peru | Unclear or not reported | Not reported | Both | Not reported | Not reported | Oxgall (oxbile) | Not reported | Stool and bile cultures |
| Benavente 1984 [19] | Lima, Peru | Typhi | Clinical suspicion | Unclear or not reported | Not reported | 2+ days | Oxgall (oxbile) |
| Stool cultures, duodenal cultures |
| Bhutta 1991a [20] | Karachi, Pakistan | Typhi | Patients with prior antibiotic treatment or a long duration of illness | Unclear or not reported | Children (age range not reported) | Not reported | Not reported | Not reported | |
| Chaicumpa 1992 [21] | Jakarta, Indonesia | Typhi | Clinical diagnosis | Inpatient | Not reported | 7 days | Oxgall (oxbile) | MacConkey’s, | Urine and stool |
| Chang 1982 (Spanish)a [22] | Lima, Peru | Typhi | Agglutination >1/160 or “significant” rise in titers, or a positive culture | Unclear or not reported | Children (age range not reported) | Not reported | Not reported | Not reported | |
| Chiragh 2005a [23] | Peshawar, Pakistan | Typhi | Clinical suspicion and a fever of more than 4–5 days; no antibiotics taken in previous 3–4 days | Unclear or not reported | Adults (ages 15+) | Not reported | Not reported | Not reported | Urine, data not shown |
| Dance 1991 [24] | Kathmandu, Nepal | Typhi, Paratyphi | Clinical diagnosis | Unclear or not reported | Not reported | Not reported | Brain heart infusion containing liquid | Not reported | |
| Debre 1935 (French)a [25] | Paris, France | Typhi | Not reported | Unclear or not reported | Not reported | Not reported | Meat liver or bile agar | Not reported | |
| Del Negro 1960 (Portuguese)a [26] | Sao Paulo, Brazil | Typhi, Paratyphi | Culture or serological confirmation of disease | Inpatient | Children (ages 0–15) | Not reported | Not reported | Not reported | Bile, urine, and stool |
| Farooqui 1991 [27] | Karachi, Pakistan | Typhi | Patients at Aga Khan hospital who had fever of unknown origin | Unclear or not reported | Not reported | 7 days | Brain heart infusion and thioglycolate | MacConkey’s, blood | |
| Gasem 1995 [28] | Semarang, Indonesia | Typhi | Fever for 6+ days and symptoms of typhoid fever | Inpatient | Adults (ages 14–60; mean 23.1) | 7 days | Oxgall (oxbile) |
| |
| Gasem 2003 [29] | Semarang, Indonesia | Typhi | Participants of an RCT of antibiotic treatment of typhoid. Pregnant women were excluded | Inpatient | Adults (ages 14+; mean 24.6; SD 7.7 years) | Not reported | Not reported | Bactec 9120 | |
| Gilman 1975 [30] | Mexico City, Mexico | Typhi | Patients with a clinical suspicion of typhoid who consented to a clinical trial of antibiotics | Unclear or not reported | Not reported | Not reported | Peptone | Not reported | Urine, stool and rose spot cultures |
| Guerra-Caceres 1979 [31] | Lima, Peru | Typhi | Clinical suspicion | Inpatient | All ages (mean 16.8; median 14; range 2–54) | 10 days | Oxoid (trypticase-soy broth) for half the specimens, and Ruiz-Castaneda for the other half | Not reported | Urine and stool |
| Hirsowitz 1951b [32] | Evaton, Transvaal, South Africa | Unclear or not reported | Culture or serological evidence of typhoid fever, or post-mortem examination consistent with typhoid fever | Inpatient | Older children and adults (ages 10+) | Not reported | Oxgall (oxbile) and nutrient | Not reported | Urine and stool |
| Hoffman 1984 [10] | Jakarta, Indonesia | Typhi, Paratyphi | Clinical suspicion | Inpatient | Older children and adults (ages 4–60; mean 22; SD 10.3) | 7 days | Oxgall (oxbile) | MacConkey’s, | Bile culture, rose-spot culture |
| Hoffman 1986 [33] | Jakarta, Indonesia | Typhi, Paratyphi | Clinical suspicion | Inpatient | All ages (mean 21.6; SD 9.4) | 21 days | Oxgall (oxbile) | MacConkey’s, | Streptokinase clot culture and rectal swab |
| James 1997b [34] | Pondicherry, India | Typhi, Paratyphi | Clinical suspicion and no evidence of chloramphenicol or bone marrow depressant use at the time of specimen collection | Unclear or not reported | Older children and adults (ages 13–42; mean 22.5) | Not reported | Not reported | Not reported | Urine and stool |
| Ling 1940 [35] | Shanghai, China | Typhi, Paratyphi | Clinical suspicion | Inpatient | Not reported | Not reported | Not reported | Not reported | Urine and stool |
| Ling 1948 [36] | Shanghai, China | Typhi, Paratyphi | Clinical suspicion | Inpatient | Not reported | 7 days | Sodium citrate solution | Endo’s agar | Bile, urine, and stool |
| Mehta 1984 [37] | Jamnagar, India | Unclear or not reported | Clinical suspicion | Inpatient | Older children and adults (ages 12–40) | 2 days | Oxgall (oxbile) | MacConkey’s | |
| Ott 1938 (German)b [38] | Berlin, Germany | Typhi, Paratyphi | Clinical suspicion | Unclear or not reported | Not reported | Not reported | Oxgall (oxbile) | Not reported | Urine and stool |
| Rajagopal 1986 [39] | Bangalore, India | Typhi, Paratyphi | Clinical suspicion | Inpatient | Not reported | Not reported | Oxgall (oxbile) | Not reported | Urine and stool |
| Rubin 1989 [40] | Jakarta, Indonesia | Typhi | Clinical suspicion | Inpatient | Older children and adults (ages 6+) | 7 days | Oxgall (oxbile) | MacConkey’s, | Rectal swabs |
| Sacks 1941b [41] | Baltimore, MD | Typhi | Clinical suspicion | Inpatient | Older children (ages 11–14) | Not reported | Not reported | Not reported | Stool and urine culture |
| Schlack 1966 (Spanish) [42] | Santiago, Chile | Typhi, Paratyphi | Clinical suspicion | Inpatient | Children (ages 8 months–13 years) | Unclear | Meat liver broth | Not reported | |
| Seidenstucker 1949 (German) [43] | Oldenburg, Germany | Typhi, Paratyphi | Not reported | Unclear or not reported | Not reported | 2 days | Oxgall (oxbile) | Not reported | Urine and stool |
| Sekarwana 1989 [44] | Bandung, Indonesia | Typhi | Clinical suspicion and fever of more than 7 days | Unclear or not reported | Children (ages 2–13; mean 6; median 5) | 7 days | Oxgall (oxbile) | Urine and stool | |
| Seshadri 1977 [45] | Madras (current-day Chennai), Tamil Nadu, India | Typhi | More than 5 days of fever with toxemia; gastrointestinal symptoms; soft splenomegaly | Unclear or not reported | Older children and adults (ages 13–35; mean 20; median 19) | Unclear | Oxgall (oxbile) | MacConkey’s | Urine and stool |
| Shin 1994b [46] | Seoul, South Korea | Typhi | Not reported | Unclear or not reported | Adults (ages 20–56) | Not reported | Not reported | Not reported | Urine and stool |
| Storti 1937 (French)b [47] | Paris, France | Typhi | Clinical suspicion | Inpatient | Not reported | Not reported | Not reported | Not reported | |
| Terminel 1973 (Spanish)b [48] | Mexico City, Mexico | Typhi | Clinical suspicion among patients who had rose spots | Unclear or not reported | Not reported | Not reported | Not reported | Not reported | Rose spot culture, stool cultures |
| Vallenas 1985 [49] | Lima, Peru | Typhi | Clinical suspicion | Unclear or not reported | Children (ages 2–13) | Not reported | Oxgall (oxbile) | Not reported | Rectal swab and duodenal culture |
| Wain 2008 [50] | Ho Chi Minh City, Vietnam and Dong Thap, Vietnam | Typhi | Clinical diagnosis | Inpatient | All ages (age range not reported) | 10 days | Oxgall (oxbile), brain heart infusion | Columbia with 0.05% sulphpolyanethosulphonate | Stool, data not shown |
| West 1989b [51] | Goroka, Papua New Guinea | Typhi | Febrile illness | Inpatient | Older children and adults (ages 10–60; mean 26.3) | 21 days | Oxoid (trypticase-soy broth) | Not reported |
Abbreviations: RCT, randomized controlled trial; SD, standard deviation.
aCitation numbers correspond to the reference list in Supplement S8. Additional details are provided in Supplementary Table S1.
bIndicates that the study will only be included in the summary of the systematic review but not in the analysis examining blood sample volume and sensitivity.
cWe categorized the age of study populations according to the following criteria: children, 0–4 years; older children, 5–15 years; adults, 15+ years.
Figure 2.Sensitivity of blood culture to detect typhoid fever. The sensitivity of blood culture is expressed as the proportion of patients who tested positive by blood culture among patients who had at least 1 positive culture (bone marrow, blood, rose spots, stools, or urine) for Salmonella Typhi or Salmonella Paratyphi. The size of the markers is proportional to the number of patients in the study. We reported the midpoint volume of the blood sample for studies that reported specimen volume as a range. We tested for heterogeneity and age-related subgroup differences via the Q-statistic, which is assumed to have a χ2 distribution with degrees of freedom equal to the number of studies minus 1 with noncentrality parameter equal to 0. Hoffman (1986) and Gasem (1995) (Supplemental Material) reported sensitivity on the same patient population using specimens of 2 different volumes per patient, so we have taken only the results from the larger specimen in each study for the subgroup analysis by age to avoid double-counting. Abbreviations: BC+, blood culture-positive; BC−, blood culture-negative; CI, confidence interval.
Figure 3.Relationship between sample volume and model estimates of blood culture sensitivity. The observed blood culture sensitivity among all culture-positive cases is plotted in black (with corresponding 95% confidence intervals), whereas the mean model-predicted blood culture sensitivity is plotted in dark pink. The lighter pink regions correspond to the model-predicted population response. (A) The model assumes no correlation with blood volume; (B) the model assumes sensitivity increases with increasing sample volume and is constrained to be zero for a hypothetical 0-mL sample; (C) the model assumes sensitivity could vary with sample volume and estimates an intercept for a hypothetical 0-mL sample. All models account for heterogeneity between studies using random effects (see Supplement S4.1).
Estimates of Sensitivity by Blood Sample Volumea
| Volume | Mean Prediction | Population Response |
|---|---|---|
| 2 mL | 0.51 (0.44–0.57) | 0.51 (0.30–0.78) |
| 5 mL | 0.56 (0.51–0.61) | 0.56 (0.38–0.80) |
| 7 mL | 0.60 (0.54–0.65) | 0.60 (0.42–0.82) |
| 10 mL | 0.65 (0.58–0.70) | 0.65 (0.46–0.84) |
aThe posterior mean prediction and population response of sensitivity, as well as the corresponding 95% credible intervals, from the log-linear meta-regression model are presented for 2, 5, 7, and 10 mL of blood. The mean prediction is the sensitivity from all studies given a specific volume of blood, whereas the population response is the estimated sensitivity that can be expected from a new study that measures sensitivity with samples of a given volume.
Figure 4.The relative probability of a positive blood culture according to patient history. (A) Relative probability of a positive blood culture for enteric fever patients who took antimicrobials versus patients who did not take antimicrobials before specimen collection. (B) Relative probability of a positive blood culture for enteric fever patients who had blood samples taken for culture in the second week of illness or later versus patients who had blood samples taken for culture in the first week of illness. To assess the possible impact of antibiotics on the relationship between duration of symptoms and sensitivity, we tested for a difference in risk ratio of the duration of illness stratified by studies carried out in the pre-antibiotic era and in the antibiotic era. All studies published before 1945 were considered to report the results of sensitivity in the absence of antimicrobial use, and studies published after 1945 were considered to report results that could show an interaction with antimicrobial use.
Figure 5.Summary findings of the risk of bias assessment using a modified QUADAS-II tool. We evaluated the risk of bias for the 7 domains of the QUADAS-II tool. The modified QUADAS-II tool was integrated into our data extraction form, found in Supplement S3. Detailed findings on the risk of bias assessment are found in Supplementary Table S6 and discussed in Supplement S5.