Literature DB >> 30302531

A-to-I mRNA editing in fungi: occurrence, function, and evolution.

Zhuyun Bian1, Yajia Ni2, Jin-Rong Xu1, Huiquan Liu3.   

Abstract

A-to-I RNA editing is an important post-transcriptional modification that converts adenosine (A) to inosine (I) in RNA molecules via hydrolytic deamination. Although editing of mRNAs catalyzed by adenosine deaminases acting on RNA (ADARs) is an evolutionarily conserved mechanism in metazoans, organisms outside the animal kingdom lacking ADAR orthologs were thought to lack A-to-I mRNA editing. However, recent discoveries of genome-wide A-to-I mRNA editing during the sexual stage of the wheat scab fungus Fusarium graminearum, model filamentous fungus Neurospora crassa, Sordaria macrospora, and an early diverging filamentous ascomycete Pyronema confluens indicated that A-to-I mRNA editing is likely an evolutionarily conserved feature in filamentous ascomycetes. More importantly, A-to-I mRNA editing has been demonstrated to play crucial roles in different sexual developmental processes and display distinct tissue- or development-specific regulation. Contrary to that in animals, the majority of fungal RNA editing events are non-synonymous editing, which were shown to be generally advantageous and favored by positive selection. Many non-synonymous editing sites are conserved among different fungi and have potential functional and evolutionary importance. Here, we review the recent findings about the occurrence, regulation, function, and evolution of A-to-I mRNA editing in fungi.

Entities:  

Keywords:  ADAR; ADAT; Adaptation; Adenosine; Deamination; Epigenetic; Fusarium graminearum; Inosine; Neurospora crassa; Non-synonymous editing; RNA modification; Sexual reproduction

Mesh:

Substances:

Year:  2018        PMID: 30302531     DOI: 10.1007/s00018-018-2936-3

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  7 in total

1.  Databases for RNA Editing Collections.

Authors:  Claudio Lo Giudice; Luigi Mansi; Graziano Pesole; Ernesto Picardi
Journal:  Methods Mol Biol       Date:  2021

2.  Gene age shapes the transcriptional landscape of sexual morphogenesis in mushroom-forming fungi (Agaricomycetes).

Authors:  Zsolt Merényi; Máté Virágh; Emile Gluck-Thaler; Jason C Slot; Brigitta Kiss; Torda Varga; András Geösel; Botond Hegedüs; Balázs Bálint; László G Nagy
Journal:  Elife       Date:  2022-02-14       Impact factor: 8.713

3.  A-to-I mRNA editing controls spore death induced by a fungal meiotic drive gene in homologous and heterologous expression systems.

Authors:  Jessica M Lohmar; Nicholas A Rhoades; Tejas N Patel; Robert H Proctor; Thomas M Hammond; Daren W Brown
Journal:  Genetics       Date:  2022-05-05       Impact factor: 4.402

Review 4.  Sordaria macrospora: 25 years as a model organism for studying the molecular mechanisms of fruiting body development.

Authors:  Ines Teichert; Stefanie Pöggeler; Minou Nowrousian
Journal:  Appl Microbiol Biotechnol       Date:  2020-03-11       Impact factor: 4.813

5.  A-to-I mRNA Editing in a Ferric Siderophore Receptor Improves Competition for Iron in Xanthomonas oryzae pv. oryzicola.

Authors:  Wenhan Nie; Sai Wang; Jin Huang; Qin Xu; Peihong Wang; Yan Wu; Rui He; Ayizekeranmu Yiming; Jingling Liang; Iftikhar Ahmad; Luoyi Fu; Longbiao Guo; Junhua Yuan; Bo Zhu; Gongyou Chen
Journal:  Microbiol Spectr       Date:  2021-10-27

6.  Genome-Wide Identification and Characterization of RNA/DNA Differences Associated with Drought Response in Wheat.

Authors:  Yan Pan; Mengqi Li; Jiaqian Huang; Wenqiu Pan; Tingrui Shi; Qifan Guo; Guang Yang; Xiaojun Nie
Journal:  Int J Mol Sci       Date:  2022-01-26       Impact factor: 5.923

7.  Genome-Wide Identification and Characterization of RNA/DNA Differences Associated with Fusarium graminearum Infection in Wheat.

Authors:  Guang Yang; Yan Pan; Qinlong Zhao; Jiaqian Huang; Wenqiu Pan; Licao Cui; Weining Song; Therese Ouellet; Youlian Pan; Xiaojun Nie
Journal:  Int J Mol Sci       Date:  2022-07-20       Impact factor: 6.208

  7 in total

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