Literature DB >> 30292816

Proteomic and metabolomic approaches in the search for biomarkers in chronic kidney disease.

M Cañadas-Garre1, K Anderson2, J McGoldrick3, A P Maxwell4, A J McKnight5.   

Abstract

Chronic kidney disease (CKD) is an aging-related disorder that represents a major global public health burden. Current biochemical biomarkers, such as serum creatinine and urinary albumin, have important limitations when used to identify the earliest indication of CKD or in tracking the progression to more advanced CKD. These issues underline the importance of finding and testing new molecular biomarkers that are capable of successfully meeting this clinical need. The measurement of changes in nature and/or levels of proteins and metabolites in biological samples from patients provide insights into pathophysiological processes. Proteomic and metabolomic techniques provide opportunities to record dynamic chemical signatures in patients over time. This review article presents an overview of the recent developments in the fields of metabolomics and proteomics in relation to CKD. Among the many different proteomic biomarkers proposed, there is particular interest in the CKD273 classifier, a urinary proteome biomarker reported to predict CKD progression and with implementation potential. Other individual non-invasive peptidomic biomarkers that are potentially relevant for CKD detection include type 1 collagen, uromodulin and mucin-1. Despite the limited sample sizes and variability of the metabolomics studies, some metabolites such as trimethylamine N-oxide, kynurenine and citrulline stand out as potential biomarkers in CKD.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chronic kidney disease; Diabetic kidney disease; Metabolomics; Proteomics

Mesh:

Substances:

Year:  2018        PMID: 30292816     DOI: 10.1016/j.jprot.2018.09.020

Source DB:  PubMed          Journal:  J Proteomics        ISSN: 1874-3919            Impact factor:   4.044


  10 in total

1.  A Targeted Multiomics Approach to Identify Biomarkers Associated with Rapid eGFR Decline in Type 1 Diabetes.

Authors:  Christine P Limonte; Erkka Valo; Daniel Montemayor; Farsad Afshinnia; Tarunveer S Ahluwalia; Tina Costacou; Manjula Darshi; Carol Forsblom; Andrew N Hoofnagle; Per-Henrik Groop; Rachel G Miller; Trevor J Orchard; Subramaniam Pennathur; Peter Rossing; Niina Sandholm; Janet K Snell-Bergeon; Hongping Ye; Jing Zhang; Loki Natarajan; Ian H de Boer; Kumar Sharma
Journal:  Am J Nephrol       Date:  2020-10-14       Impact factor: 3.754

2.  Plasma metabolites associated with chronic kidney disease and renal function in adults from the Baltimore Longitudinal Study of Aging.

Authors:  Yuko Yamaguchi; Marta Zampino; Ruin Moaddel; Teresa K Chen; Qu Tian; Luigi Ferrucci; Richard D Semba
Journal:  Metabolomics       Date:  2021-01-11       Impact factor: 4.747

Review 3.  Genetic Susceptibility to Chronic Kidney Disease - Some More Pieces for the Heritability Puzzle.

Authors:  Marisa Cañadas-Garre; Kerry Anderson; Ruaidhri Cappa; Ryan Skelly; Laura Jane Smyth; Amy Jayne McKnight; Alexander Peter Maxwell
Journal:  Front Genet       Date:  2019-05-31       Impact factor: 4.599

Review 4.  The Challenges of Chromosome Y Analysis and the Implications for Chronic Kidney Disease.

Authors:  Kerry Anderson; Marisa Cañadas-Garre; Robyn Chambers; Alexander Peter Maxwell; Amy Jayne McKnight
Journal:  Front Genet       Date:  2019-09-04       Impact factor: 4.599

Review 5.  Advances in the Progression and Prognosis Biomarkers of Chronic Kidney Disease.

Authors:  Zhonghong Yan; Guanran Wang; Xingyang Shi
Journal:  Front Pharmacol       Date:  2021-12-21       Impact factor: 5.810

Review 6.  Kynurenine pathway in kidney diseases.

Authors:  Izabela Zakrocka; Wojciech Załuska
Journal:  Pharmacol Rep       Date:  2021-10-06       Impact factor: 3.919

7.  Altered O-glycomes of Renal Brush-Border Membrane in Model Rats with Chronic Kidney Diseases.

Authors:  Aiying Yu; Jingfu Zhao; Jieqiang Zhong; Junyao Wang; Shiv Pratap S Yadav; Bruce A Molitoris; Mark C Wagner; Yehia Mechref
Journal:  Biomolecules       Date:  2021-10-21

Review 8.  TMAO as a potential biomarker and therapeutic target for chronic kidney disease: A review.

Authors:  Ye Zixin; Chen Lulu; Zeng Xiangchang; Fang Qing; Zheng Binjie; Luo Chunyang; Rao Tai; Ouyang Dongsheng
Journal:  Front Pharmacol       Date:  2022-08-12       Impact factor: 5.988

9.  Analysis of chronic kidney disease patients by targeted next-generation sequencing identifies novel variants in kidney-related genes.

Authors:  Manal Alaamery; Jahad Alghamdi; Salam Massadeh; Mona Alsawaji; Nora Aljawini; Nour Albesher; Bader Alghamdi; Mansour Almutairi; Fayez Hejaili; Majid Alfadhel; Batoul Baz; Bader Almuzzaini; Adel F Almutairi; Mubarak Abdullah; Francisco J Quintana; Abdullah Sayyari
Journal:  Front Genet       Date:  2022-08-11       Impact factor: 4.772

10.  Classification of Chronic Kidney Disease in Sonography Using the GLCM and Artificial Neural Network.

Authors:  Dong-Hyun Kim; Soo-Young Ye
Journal:  Diagnostics (Basel)       Date:  2021-05-11
  10 in total

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