Literature DB >> 30285440

Dynamics of Quaternary Structure Transitions in R-State Carbonmonoxyhemoglobin Unveiled in Time-Resolved X-ray Scattering Patterns Following a Temperature Jump.

Hyun Sun Cho1, Friedrich Schotte1, Valentyn Stadnytskyi1, Anthony DiChiara2, Robert Henning3, Philip Anfinrud1.   

Abstract

It is well-known that tetrameric hemoglobin binds ligands cooperatively by undergoing a ligand-induced T → R quaternary structure transition, a structure-function relationship that has long served as a model system for understanding allostery in proteins. However, kinetic studies of the reverse, R → T quaternary structure transition following photolysis of carbonmonoxyhemoglobin (HbCO) reveal complex behavior that may be better explained by the presence of two different R quaternary structures coexisting in thermal equilibrium. Indeed, we report here time-resolved small- and wide-angle X-ray scattering (SAXS/WAXS) patterns of HbCO following a temperature jump that not only provide unambiguous evidence for more than one R state, but also unveil the time scale for interconversion between them. Since the time scale for the photolysis-induced R → T transition is likely different for different R-states, this structural heterogeneity must be accounted for to properly explain the kinetic heterogeneity observed in time-resolved spectroscopic studies following photolysis of HbCO.

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Year:  2018        PMID: 30285440      PMCID: PMC6580858          DOI: 10.1021/acs.jpcb.8b07414

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  31 in total

1.  Global allostery model of hemoglobin. Modulation of O(2) affinity, cooperativity, and Bohr effect by heterotropic allosteric effectors.

Authors:  Takashi Yonetani; Sung-Ick Park; Antonio Tsuneshige; Kiyohiro Imai; Kenji Kanaori
Journal:  J Biol Chem       Date:  2002-07-09       Impact factor: 5.157

2.  Dynamics of the quaternary conformational change in trout hemoglobin.

Authors:  J Hofrichter; E R Henry; A Szabo; L P Murray; A Ansari; C M Jones; M Coletta; G Falcioni; M Brunori; W A Eaton
Journal:  Biochemistry       Date:  1991-07-02       Impact factor: 3.162

3.  Quaternary structure of carbonmonoxyhemoglobins in solution: structural changes induced by the allosteric effector inositol hexaphosphate.

Authors:  Qingguo Gong; Virgil Simplaceanu; Jonathan A Lukin; Janel L Giovannelli; Nancy T Ho; Chien Ho
Journal:  Biochemistry       Date:  2006-04-25       Impact factor: 3.162

4.  Acceleration of tetramer formation by the binding of inositol hexaphosphate to hemoglobin dimers.

Authors:  B L Wiedermann; J S Olson
Journal:  J Biol Chem       Date:  1975-07-10       Impact factor: 5.157

5.  Role of Heme Pocket Water in Allosteric Regulation of Ligand Reactivity in Human Hemoglobin.

Authors:  Raymond M Esquerra; Bushra M Bibi; Pooncharas Tipgunlakant; Ivan Birukou; Jayashree Soman; John S Olson; David S Kliger; Robert A Goldbeck
Journal:  Biochemistry       Date:  2016-07-13       Impact factor: 3.162

6.  Probing anisotropic structure changes in proteins with picosecond time-resolved small-angle X-ray scattering.

Authors:  Hyun Sun Cho; Friedrich Schotte; Naranbaatar Dashdorj; John Kyndt; Philip A Anfinrud
Journal:  J Phys Chem B       Date:  2013-10-30       Impact factor: 2.991

7.  A mathematical model for structure-function relations in hemoglobin.

Authors:  A Szabo; M Karplus
Journal:  J Mol Biol       Date:  1972-12-14       Impact factor: 5.469

8.  Comparison of experimental binding data and theoretical models in proteins containing subunits.

Authors:  D E Koshland; G Némethy; D Filmer
Journal:  Biochemistry       Date:  1966-01       Impact factor: 3.162

9.  Allosteric intermediates in hemoglobin. 1. Nanosecond time-resolved circular dichroism spectroscopy.

Authors:  S C Björling; R A Goldbeck; S J Paquette; S J Milder; D S Kliger
Journal:  Biochemistry       Date:  1996-07-02       Impact factor: 3.162

10.  Intersubunit communication via changes in hemoglobin quaternary structures revealed by time-resolved resonance Raman spectroscopy: direct observation of the Perutz mechanism.

Authors:  Kenta Yamada; Haruto Ishikawa; Misao Mizuno; Naoya Shibayama; Yasuhisa Mizutani
Journal:  J Phys Chem B       Date:  2013-10-09       Impact factor: 2.991

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  7 in total

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Authors:  Zhengnan Yuan; Ladie Kimberly De La Cruz; Xiaoxiao Yang; Binghe Wang
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Review 3.  Biophysical Approaches for the Characterization of Protein-Metabolite Interactions.

Authors:  Anja Thalhammer; Nina K Bröker
Journal:  Methods Mol Biol       Date:  2023

Review 4.  Time-resolved X-ray scattering studies of proteins.

Authors:  Hyun Sun Cho; Friedrich Schotte; Valentyn Stadnytskyi; Philip Anfinrud
Journal:  Curr Opin Struct Biol       Date:  2021-06-25       Impact factor: 7.786

Review 5.  Impact of Conformational Substates and Energy Landscapes on Understanding Hemoglobin Kinetics and Function.

Authors:  William A Eaton
Journal:  J Biol Phys       Date:  2021-11-11       Impact factor: 1.560

6.  Unfolding bovine α-lactalbumin with T-jump: Characterizing disordered intermediates via time-resolved x-ray solution scattering and molecular dynamics simulations.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2021-03-14       Impact factor: 3.488

7.  Temperature-jump solution X-ray scattering reveals distinct motions in a dynamic enzyme.

Authors:  Michael C Thompson; Benjamin A Barad; Alexander M Wolff; Hyun Sun Cho; Friedrich Schotte; Daniel M C Schwarz; Philip Anfinrud; James S Fraser
Journal:  Nat Chem       Date:  2019-09-16       Impact factor: 24.427

  7 in total

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