Literature DB >> 30269209

Identification and Mutational Analysis of Escherichia coli Sorbitol-Enhanced Glucose-Repressed srlA Promoter Expressed in LB Medium by Using Homologous Recombination and One-Round PCR Products.

Mikiko Nakamura1,2, Junya Aihara3, Hisashi Hoshida3,4,5, Rinji Akada6,7,8.   

Abstract

Escherichia coli has been used for recombinant protein production for many years. However, no native E. coli promoters have been found for constitutive expression in LB medium. To obtain high-expression E. coli promoters active in LB medium, we inserted various promoter regions upstream of eEmRFP that encodes a red fluorescent protein. Among the selected promoters, only colonies of srlA promoter transformants turned red on LB plate. srlA is a gene that regulates sorbitol utilization. The addition of sorbitol enhanced eEmRFP expression but glucose and other sugars repressed, indicating that srlAp is a sorbitol-enhanced glucose-repressed promoter. To analyze the srlAp sequence, a novel site-directed mutagenesis method was developed. Since we demonstrated that homologous recombination in E. coli could occur between 12-bp sequences, 12-bp overlapping sequences were attached to the set of primers that were designed to produce a full-length plasmid, denoted "one-round PCR product." Using this method, we identified that the srlA promoter region was 100 bp. Further, the sequence adjacent to the start codon was found to be essential for high expression, suggesting that the traditionally used restriction enzyme sites for cloning in the promoter region have hindered expression. The srlA-driven expression system and DNA manipulation with one-round PCR products are useful tools in E. coli genetic engineering.

Entities:  

Keywords:  Constitutive promoter; Homologous recombination; Overlapping sequence; Sorbitol; srlA

Mesh:

Substances:

Year:  2018        PMID: 30269209     DOI: 10.1007/s12033-018-0123-2

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  27 in total

1.  Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli.

Authors:  Maureen K Thomason; Thorsten Bischler; Sara K Eisenbart; Konrad U Förstner; Aixia Zhang; Alexander Herbig; Kay Nieselt; Cynthia M Sharma; Gisela Storz
Journal:  J Bacteriol       Date:  2014-09-29       Impact factor: 3.490

2.  Spacing of the -10 and -35 regions in the tac promoter. Effect on its in vivo activity.

Authors:  J Brosius; M Erfle; J Storella
Journal:  J Biol Chem       Date:  1985-03-25       Impact factor: 5.157

3.  Quantitative analysis of ribosome binding sites in E.coli.

Authors:  D Barrick; K Villanueba; J Childs; R Kalil; T D Schneider; C E Lawrence; L Gold; G D Stormo
Journal:  Nucleic Acids Res       Date:  1994-04-11       Impact factor: 16.971

4.  Overproduction of phage lambda repressor under control of the lac promotor of Escherichia coli.

Authors:  B Gronenborn
Journal:  Mol Gen Genet       Date:  1976-11-17

5.  Glucitol-specific enzymes of the phosphotransferase system in Escherichia coli. Nucleotide sequence of the gut operon.

Authors:  M Yamada; M H Saier
Journal:  J Biol Chem       Date:  1987-04-25       Impact factor: 5.157

6.  The influence of the nucleotide sequences of random Shine-Dalgarno and spacer region on bovine growth hormone gene expression.

Authors:  Soon-Young Paik; Kyung Soo Ra; Hoon Sik Cho; Kwang Bon Koo; Hyung Suk Baik; Myung Chul Lee; Jong Won Yun; Jang Won Choi
Journal:  J Microbiol       Date:  2006-02       Impact factor: 3.422

7.  Predicting Shine-Dalgarno sequence locations exposes genome annotation errors.

Authors:  J Starmer; A Stomp; M Vouk; D Bitzer
Journal:  PLoS Comput Biol       Date:  2006-05-19       Impact factor: 4.475

Review 8.  Positively regulated bacterial expression systems.

Authors:  Trygve Brautaset; Rahmi Lale; Svein Valla
Journal:  Microb Biotechnol       Date:  2008-10-15       Impact factor: 5.813

9.  Optimal cloning of PCR fragments by homologous recombination in Escherichia coli.

Authors:  Ana Paula Jacobus; Jeferson Gross
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

10.  Comparison of strand-specific transcriptomes of enterohemorrhagic Escherichia coli O157:H7 EDL933 (EHEC) under eleven different environmental conditions including radish sprouts and cattle feces.

Authors:  Richard Landstorfer; Svenja Simon; Steffen Schober; Daniel Keim; Siegfried Scherer; Klaus Neuhaus
Journal:  BMC Genomics       Date:  2014-05-09       Impact factor: 3.969

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