| Literature DB >> 30265726 |
Harjit Kaur1, Badaruddoza Badaruddoza1, Veena Bains1, Anupam Kaur1.
Abstract
BACKGROUND AND AIMS: At present obesity and metabolic syndrome (MetS) in India are the most challenging health problems. It is also well accepted that obesity is a significant risk factor for the development of metabolic syndrome and other degenerative diseases. Many studies have reported that single-nucleotide polymorphisms (SNPs) of the adiponectin (ADIPOQ) gene have been associated with obesity and its related disorders. Here, we aimed to investigate the association of two intronic variants in ADIPOQ gene, -3971A>G (rs822396) and +276G>T (rs1501299) with obesity and metabolic syndrome.Entities:
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Year: 2018 PMID: 30265726 PMCID: PMC6161880 DOI: 10.1371/journal.pone.0204502
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Sequencing chromatograms demonstrating the homozygous wild type, hetrozygous and homozygous mutant genotypes for (A) +276 G>T (rs1501299) and (B) -3971 A>G (rs822396) SNPs.
Clinical and biochemical characteristics of the study population.
| Variables | Non-obese | Obese | p values |
|---|---|---|---|
| Age(years) | 38.13±10.40 | 37.85±9.767 | 0.001 |
| Sex-ratio (men/women) | 0.304 | 0.179 | 0.022 |
| Height(cm) | 161.13±8.90 | 158.16±9.15 | 0.038 |
| Weight(kg) | 55.29±7.00 | 80.68±12.72 | 0.001 |
| BMI(kg/m2) | 21.24±1.27 | 32.25±4.31 | 0.001 |
| WC(cm) | 78.07±9.31 | 105.59±9.32 | 0.001 |
| WHR | 0.82±0.09 | 0.94±0.07 | 0.001 |
| WHtR | 0.49±0.06 | 0.67±0.06 | 0.001 |
| SBP(mm Hg) | 118.64±13.66 | 128.79±14.99 | 0.001 |
| DBP(mm Hg) | 76.32±11.44 | 83.27±10.84 | 0.001 |
| Pulse rate(mm Hg) | 79.43±10.36 | 83.08±10.25 | 0.026 |
| Pulse pressure | 42.32±10.33 | 45.52±12.88 | 0.09 |
| Fasting glucose(mg/dl) | 79.51±14.71 | 86.87±14.67 | 0.002 |
| Met S | 34 (11.30 | 73 (31.2) | 0.001 |
| TC(mg/dl) | 164.84±28.83 | 185.19±37.19 | 0.001 |
| TG(mg/dl) | 123.88±63.00 | 141.99±70.46 | 0.05 |
| HDL-C(mg/dl) | 43.79±12.02 | 42.78±10.90 | 0.574 |
| LDL-C(mg/dl) | 95.03±26.16 | 114.01±39.90 | 0.001 |
| VLDL-C(mg/dl) | 24.77±12.60 | 28.39±14.09 | 0.05 |
| Sedentary life style | 65 (21.67 | 187 (74.8 | 0.001 |
| Active life style | 235 (78.33) | 63 (25.2) | |
| Vegetarian | 191 (63.67) | 171 (68.4) | 0.281 |
| Non-vegetarian | 109 (36.33) | 79 (31.6) |
Mean ± standard deviation or n (%). BMI, body mass index; WC, waist circumference; WHR, waist to hip ratio; WHtR, waist to height ratio; SBP, systolic blood pressure; DBP, diastolic blood pressure; MetS, metabolic syndrome; TC, total cholesterol; TG, triglyceride; HDL-C, high density lipoprotein-cholesterol; LDL-C, low density lipoprotein cholesterol; VLDL-C, very low density lipoprotein cholesterol.
*p< 0.002 is statistically significant with Bonferroni correction
Genotype frequencies of ADIPOQ-3971A>G (rs822396)and +276G>T (rs1501299) in obese, non-obese and combined study population.
| Genotypes/Alleles | Study Population %(n) (550) | Obese%(n) (250) | Non-obese%(n) (300) | p | p | |
|---|---|---|---|---|---|---|
| -3971A>G (rs822396) | AA | 47.64(262) | 45.6(114) | 49.3(148) | 0.383 | 0.032 |
| AG | 43.46(239) | 42.0(105) | 44.67(134) | 0.532 | ||
| GG | 8.9(49) | 12.4(31) | 6.00(18) | |||
| A | 69.37(763) | 66.6(333) | 71.64(430) | ------ | 0.06 | |
| G | 30.63(337) | 33.4(167) | 28.34(170) | ------ | ||
| +276G>T (rs1501299) | GG | 59.09(325) | 56(140) | 61.67(185) | 0.178 | 0.103 |
| GT | 26.73(147) | 26.4(66) | 27(81) | 0.862 | ||
| TT | 14.18(78) | 17.6(44) | 11.33(34) | 0.035 | ||
| G | 72.45(797) | 69.2(346) | 75.17(451) | ------ | ||
| T | 27.54(303) | 30.8(154) | 24.83(149) | ------- |
aComparison between obese and non obese subjects for each genotype;
bComparison between obese and non obese subjects for overall genotypes; Bonferroni corrected p = 0.025 (The significance level p = 0.05 is divided by number of selected SNP’s); SNPs, single nucleotide polymorphisms.
Distribution of haplotypes frequency and measure of LD, observed in comparison of ADIPOQ SNPs in combined study population.
| Haplotype-3971A>G/+276G>T | Study Population %(n)(550) | Obese %(n) (250) | Non-obese%(n) (300) | OR(CI)(p-values) | p | p |
|---|---|---|---|---|---|---|
| AG | 0.462(254) | 0.416(104) | 0.5(150) | Reference | 0.049 | 0.015 |
| GG | 0.255(140) | 0.264(66) | 0.247(74) | 1.28(0.84–1.94(p = 0.23) | 0.639 | |
| AT | 0.227(125) | 0.232(58) | 0.223(67) | 1.24(0.81–1.92)(p = 0.31) | 0.806 | |
| GT | 0.056(31) | 0.088(22) | 0.03(9) | 3.52(1.56–7.96) | ||
| LD measure | Obesity | Metabolic syndrome | ||||
| -3971A>G and+276G>T | D’ | r2 | D’ | r2 | ||
| 0.319 | 0.018 | 0.22 | 0.028 | |||
aComparison between obese and non obese subjects for each genotype;
bComparison between obese and non obese subjects for overall genotypes; Bonferroni corrected p = 0.0125 (The significance level p = 0.05 is divided by number of haplotypes); Order of SNPs in ADIPOQ haplotypes: -3971A>G, +276G>T.
Fig 2LD plot showing the position of the two ADIPOQ polymorphisms and pair-wise D’ values observed in the study population with respect to (A) obesity (B) MetS.
Clinical characteristics of the study population according to ADIPOQ-3971A>G(rs822396) and +276G>T (rs1501299) genotypes.
| SNP’s Parameters | -3971A/G (rs822396) | +276G>T (rs1501299) | P- values | ||||
|---|---|---|---|---|---|---|---|
| AA | GA | GG | GG | GT | TT | ||
| BMI | 28.76±6.28 | 27.04±6.55 | 30.29±3.86 | 27.96±5.01 | 23.76±3.79 | 28.99±3.21 | 0.015 |
| TC | 162.32±20.26 | 173.50±34.28 | 179.81±26.51 | 165.17±25.11 | 178.00±26.42 | 202.79±24.50 | 0.004 |
| TG | 133.02±49.87 | 122.89±47.89 | 137.44±38.36 | 116.29±41.11 | 129.79±45.55 | 164.53±33.09 | 0.317 |
| HDL-C | 47.03±10.27 | 42.97±10.68 | 43.46±8.65 | 37.97±9.26 | 44.16±10.56 | 32.16±4.89 | 0.048 |
| LDL-C | 106.48±28.29 | 102.81±31.03 | 132.02±21.12 | 106.09±37.73 | 109.15±37.81 | 154.36±20.75 | 0.001 |
| VLDL-C | 29.07±14.44 | 25.69±12.20 | 28.99±18.89 | 24.04±8.66 | 28.14±14.17 | 30.74±9.57 | 0.283 |
| WC | 94.09±12.98 | 92.37±17.27 | 105.68±10.56 | 85.84±7.15 | 89.80±13.30 | 97.10±10.91 | 0.001 |
| WHR | 0.86±0.12 | 0.87±0.09 | 0.91±0.98 | 0.89±0.08 | 0.88±0.09 | 0.95±0.06 | 0.013 |
| WHtR | 0.61±0.11 | 0.58±0.11 | 0.69±0.09 | 0.62±0.11 | 0.62±0.09 | 0.73±0.11 | 0.001 |
aComparison for -3971A>G (rs822396);
bComparison for +276G>T (rs1501299),
†p>0.05 compared with wild type;
§p>0.05 compared with heterozygote, tested by ANOVA with the Bonferroni method.
Association between ADIPOQ polymorphisms and metabolic syndrome risk.
| SNP’s | Genotypes | Unadjusted OR(CI) (p-value) | Adjusted OR1 (p-value) | Adjusted OR2 (p-value) |
|---|---|---|---|---|
| AG/AA | 1.15(1.02–1.28) p = 0.19 | 1.18(1.04–1.29) p = 0.12 | 1.16(1.03–1.28) p = 0.18 | |
| GG/AA | 1.42(1.15–1.54) | 1.47(1.14–1.54) | 1.45(1.15–1.54) | |
| GT/GG | 1.21(1.03–1.39) p = 0.19 | 1.26(1.02–1.39) p = 0.26 | 1.23(1.03–1.40) p = 0.25 | |
| TT/GG | 1.57(1.26–1.89) | 1.63(1.20–1.88) | 1.65(1.19–1.94) |
OR1 = After adjustments for age, gender and diet pattern; OR2 = After adjustmentsfor age, gender, diet pattern and life style; OR, odds ratios; CI, confidence interval
Association between ADIPOQ polymorphisms and obesity risk.
| SNP’s | Genotypes | Unadjusted OR(CI) (p-value) | Adjusted OR1 (p-value) | Adjusted OR2 (p-value) |
|---|---|---|---|---|
| AG/AA | 0.95(0.91–1.08) p = 0.09 | 0.96(0.92–1.19) p = 0.21 | 0.95(0.90–1.07) p = 0.08 | |
| GG/AA | 1.52(0.98–2.16) | 1.44(0.97–1.96) p = 0.05 | 1.46(0.97–1.98) | |
| GT/GG | 0.81(0.73–0.89) p = 0.11 | 0.83 (0.74–0.90) p = 0.12 | 0.82 (0.73–0.90) p = 0.12 | |
| TT/GG | 1.58(0.93–1.99) | 1.68(0.85–2.05) | 1.65(0.85–1.99) |
OR1 = Afteradjustments for age, gender and diet pattern;
OR2 = After adjustments for age, gender, diet pattern and life style.
Association between ADIPOQ polymorphisms haplotypes, obesity and metabolic syndrome risk in study population.
| Obesity risk | MetS risk | |||||
|---|---|---|---|---|---|---|
| Genotypes | Adjusted OR | CI | p-value | Adjusted OR | CI | p-value |
| GG/AG | 1.12 | 0.73–1.69 | 0.603 | 2.11 | 0.75–5.94 | 0.152 |
| AT/AG | 1.14 | 0.73–1.76 | 0.559 | 0.775 | 0.366–1.64 | 0.507 |
| GT/AG | 2.69 | 1.25–5.78 | 2.73 | 0.735–4.76 | ||
*After adjustments for age, gender, diet pattern and life style
Comparison of minor allele frequencies (MAF) of ADIPOQ -3971A>G(rs822396) and +276 G>T (rs1501299)polymorphisms in different study populations.
| Population | MAF (%) | Disease status | Association Status | References |
|---|---|---|---|---|
| South Indian(Chennai) | 35.6 | Obesity,T2DM | Present | Ramya et al. [ |
| Tunisian | 18 | T2DM | Present | Mtiraoui et al. [ |
| Latvian | 22 | T2DM | Absent | Kalnina et al. [ |
| German | 25.4 | Disinhibition | Present | Rohde et al.[ |
| Korean | 9.14 | Ischemic stroke | Present | Cheong et al., [ |
| North Indian(Uttar Pradesh) | 10.94 | Insulin resistance syndrome | Present | Prakash et al. [ |
| Tunisian | 30.15 | Obesity, MetS | Present | Boumaizaet al.[ |
| Egyptian | 76.4 | Obesity | Present | Zaki et al. [ |
| South-Indian (Chennai) | 17.7 | Obesity | Present | Ramya et al. [ |
| Chinese | 20.06 | T2DM | Absent | Toy et al. [ |
| Italian | 29.9 | Obesity, insulin resistance syndrome | Present | Menzaghi et al. [ |
| Latavian | 0.28 | Obesity,T2DM | Absent | Kalnina et al. [ |
| Danish | 29.59 | Obesity | Absent | Tanko et al. [ |
| Korean | 28.3 | T2DM | Present | Kang et al. [ |
| Chinese | 26.7 | MetS | Absent | Li et al. [ |
| Japanese | 23.2 | T2DM | Present | Hara et al. [ |
| Prague | 28 | Obesity | Present | Krizova et al. [ |
| France | 29 | Obesity | Present | Bouatia-Najiet al.[ |
| Taiwanese | 30.55 | Obesity, MetS, T2DM | Present | Yang et al. [ |
| Austrian | 30 | MetS | Present | Heid et al. [ |