Literature DB >> 30265231

Planococcus halotolerans sp. nov., isolated from a saline soil sample in China.

Longzhan Gan1, Yi Zhang2, Lingli Zhang3, Xiaoguang Li1, Zhikuan Wang1, Linling He1, Zhenjiang Li2, Yongqiang Tian1.   

Abstract

A novel Gram-stain-positive, coccoid or short rod-shaped, moderate-orange-pigmented, halotolerant and psychrotolerant bacterium, designated strain SCU63T, was isolated from a saline soil sample in China, and characterized by a polyphasic taxonomic approach. 16S rRNA gene sequence similarity of strain SCU63T to species in the genera Planococcus and Planomicrobium ranged from 96.5 to 98.6 %. Phylogenetic trees as well as diagnostic signature nucleotides in the 16S rRNA gene sequence supported the view that this strain should be assigned to the genus Planococcus. Further, average nucleotide identity and digital DNA-DNA hybridization analyses confirmed the separate species status of strain SCU63T relative to the closely related taxa. The isolate grew at 0-40 °C (optimum, 30-35 °C), at pH 6.5-9.0 (pH 7.0-7.5) and in the presence of 0-15 % (w/v) NaCl (3 %). The principal fatty acids were anteiso-C15 : 0, C16 : 1ω7c alcohol, iso-C16 : 0 and iso-C14 : 0, and the dominant isoprenoid quinones were MK-8 and MK-7. The peptidoglycan type was determined to be A4α (l-Lys-d-Glu), and the polar lipids contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminophospholipid and one unidentified lipid. The DNA G+C content was 44.6 mol%. Based on the genotypic, phenotypic and chemotaxonomic data, strain SCU63T can be classified as a novel species in the genus Planococcus, for which the name Planococcushalotolerans sp. nov. is proposed. The type strain is SCU63T (=CGMCC 1.13628T=KCTC 43001T).

Entities:  

Keywords:  Planococcus halotolerans sp. nov.; halotolerant bacterium; polyphasic taxonomy; whole genome sequencing

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Year:  2018        PMID: 30265231     DOI: 10.1099/ijsem.0.003019

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Characteristics of Planococcus antioxidans sp. nov., an antioxidant-producing strain isolated from the desert soil in the Qinghai-Tibetan Plateau.

Authors:  Binglin Zhang; Ruiqi Yang; Gaosen Zhang; Yang Liu; Dongming Zhang; Wei Zhang; Tuo Chen; Guangxiu Liu
Journal:  Microbiologyopen       Date:  2020-03-11       Impact factor: 3.139

2.  Whole genome sequencing and comparative genomic analyses of Planococcus alpniumensis MSAK28401T, a new species isolated from Antarctic krill.

Authors:  Yuanyuan Wang; Lingbo Ma; Jian He; Zixuan Liu; Shaoping Weng; Lumin Wang; Jianguo He; Changjun Guo
Journal:  BMC Microbiol       Date:  2021-10-22       Impact factor: 3.605

  2 in total

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