Literature DB >> 3025878

Human collagen genes encoding basement membrane alpha 1 (IV) and alpha 2 (IV) chains map to the distal long arm of chromosome 13.

C A Griffin, B S Emanuel, J R Hansen, W K Cavenee, J C Myers.   

Abstract

At least 20 genes encode the structurally related collagen chains that comprise greater than 10 homo- or heterotrimeric types. Six members of this multigene family have been assigned to five chromosomes in the human genome. The two type I genes, alpha 1 and alpha 2, are located on chromosomes 17 and 7, respectively, and the alpha 1 (II) gene is located on chromosome 12. Our recent mapping of the alpha 1 (III) and alpha 2 (V) genes to the q24.3----q31 region of chromosome 2 provided the only evidence that the collagen genes are not entirely dispersed. To further determine their organization, we and others localized the alpha 1 (IV) gene to chromosome 13 and in our experiments sublocalized the gene to band q34 by in situ hybridization. Here we show the presence of the alpha 2 type IV locus also on the distal long arm of chromosome 13 by hybridizing a human alpha 2 (IV) cDNA clone to rodent-human hybrids and to metaphase chromosomes. To our knowledge, these studies represent the only demonstration of linkage between genes encoding both polypeptide chains of the same collagen type.

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Year:  1987        PMID: 3025878      PMCID: PMC304239          DOI: 10.1073/pnas.84.2.512

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

Review 1.  Biochemistry and metabolism of basement membranes.

Authors:  N A Kefalides; R Alper; C C Clark
Journal:  Int Rev Cytol       Date:  1979

2.  Structural and immunological characterization of type IV collagen isolated from chicken tissues.

Authors:  R Mayne; H Wiedemann; W Dessau; K Von der Mark; P Bruckner
Journal:  Eur J Biochem       Date:  1982-08

3.  A network model for the organization of type IV collagen molecules in basement membranes.

Authors:  R Timpl; H Wiedemann; V van Delden; H Furthmayr; K Kühn
Journal:  Eur J Biochem       Date:  1981-11

4.  Biosynthesis of two subunits of type IV procollagen and of other basement membrane proteins by a human tumor cell line.

Authors:  K Alitalo; A Vaheri; T Krieg; R Timpl
Journal:  Eur J Biochem       Date:  1980-08

5.  Assignment of the human pro alpha 2(I) collagen structural gene (COLIA2) to chromosome 7 by molecular hybridization.

Authors:  C Junien; D Weil; J C Myers; N Van Cong; M L Chu; C Foubert; M S Gross; D J Prockop; J C Kaplan; F Ramirez
Journal:  Am J Hum Genet       Date:  1982-05       Impact factor: 11.025

6.  Basement membrane (type IV) collagen is a heteropolymer.

Authors:  B Trüeb; B Gröbli; M Spiess; B F Odermatt; K H Winterhalter
Journal:  J Biol Chem       Date:  1982-05-10       Impact factor: 5.157

7.  Type-IV collagens. Isolation and characterization of two structurally distinct collagen chains from bovine kidney cortices.

Authors:  S N Dixit
Journal:  Eur J Biochem       Date:  1980-05

8.  Biosynthesis of type IV procollagens.

Authors:  K Tryggvason; P G Robey; G R Martin
Journal:  Biochemistry       Date:  1980-04-01       Impact factor: 3.162

9.  COOH-terminal propeptides of the major human procollagens. Structural, functional and genetic comparisons.

Authors:  A S Dion; J C Myers
Journal:  J Mol Biol       Date:  1987-01-05       Impact factor: 5.469

10.  Type IV collagen from chicken muscular tissues. Isolation and characterization of the pepsin-resistant fragments.

Authors:  R Mayne; J G Zettergren
Journal:  Biochemistry       Date:  1980-08-19       Impact factor: 3.162

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  33 in total

Review 1.  Comparative map for mice and humans.

Authors:  J H Nadeau; M T Davisson; D P Doolittle; P Grant; A L Hillyard; M R Kosowsky; T H Roderick
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

2.  The molecular genetics of Alport syndrome: report of two workshops.

Authors:  F Flinter; M Bobrow
Journal:  J Med Genet       Date:  1992-05       Impact factor: 6.318

Review 3.  Alport syndrome, basement membranes and collagen.

Authors:  C E Kashtan; M M Kleppel; R J Butkowski; A F Michael; A J Fish
Journal:  Pediatr Nephrol       Date:  1990-09       Impact factor: 3.714

4.  Bifunctional promoter of type IV collagen COL4A5 and COL4A6 genes regulates the expression of alpha5 and alpha6 chains in a distinct cell-specific fashion.

Authors:  Malin Sund; Yohei Maeshima; Raghu Kalluri
Journal:  Biochem J       Date:  2005-05-01       Impact factor: 3.857

Review 5.  Comparative map for mice and humans.

Authors:  J H Nadeau; M T Davisson; D P Doolittle; P Grant; A L Hillyard; M Kosowsky; T H Roderick
Journal:  Mamm Genome       Date:  1991       Impact factor: 2.957

6.  A study by immunofluorescence microscopy of the NC1 domain of collagen type IV in glomerular basement membranes of two patients with hereditary nephritis.

Authors:  P S Thorner; R Baumal; A Eddy; P M Marrano
Journal:  Virchows Arch A Pathol Anat Histopathol       Date:  1990

7.  Cloning and chromosomal localization of human genes encoding the three chains of type VI collagen.

Authors:  D Weil; M G Mattei; E Passage; V C N'Guyen; D Pribula-Conway; K Mann; R Deutzmann; R Timpl; M L Chu
Journal:  Am J Hum Genet       Date:  1988-03       Impact factor: 11.025

8.  Immunoreactivity of the JK-132 monoclonal antibody directed against basement membrane collagen in normal and diabetic glomeruli.

Authors:  H Makino; K Shikata; T Hayashi; J Wieslander; T Haramoto; K Hirata; J Wada; T Yoshida; K Yoshioka; Z Ota
Journal:  Virchows Arch       Date:  1994       Impact factor: 4.064

9.  The transcriptome of cervical ripening in human pregnancy before the onset of labor at term: identification of novel molecular functions involved in this process.

Authors:  Sonia S Hassan; Roberto Romero; Adi L Tarca; Chia-Ling Nhan-Chang; Edi Vaisbuch; Offer Erez; Pooja Mittal; Juan Pedro Kusanovic; Shali Mazaki-Tovi; Lami Yeo; Sorin Draghici; Jung-Sun Kim; Niels Uldbjerg; Chong Jai Kim
Journal:  J Matern Fetal Neonatal Med       Date:  2009-12

10.  Canine X chromosome-linked hereditary nephritis: a genetic model for human X-linked hereditary nephritis resulting from a single base mutation in the gene encoding the alpha 5 chain of collagen type IV.

Authors:  K Zheng; P S Thorner; P Marrano; R Baumal; R R McInnes
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

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