Pezhman Mohammadi1, Grégory Beaune2, Bjørn Torger Stokke3, Jaakko V I Timonen2, Markus B Linder1. 1. Department of Bioproducts and Biosystems, School of Chemical Engineering, Aalto University, FI-02150, Espoo, Finland. 2. Department of Applied Physics, School of Science, Aalto University, FI-02150, Espoo, Finland. 3. Biophysics and Medical Technology, Department of Physics, The Norwegian University of Science and Technology, NTNU, NO-7491 Trondheim, Norway.
Abstract
Liquid-liquid phase separation of biomacromolecules plays a critical role in many of their functions, both as cellular components and in structural assembly. Phase separation is also a key mechanism in the assembly of engineered recombinant proteins for the general aim to build new materials with unique structures and properties. Here the phase separation process of an engineered protein with a block-architecture was studied. As a central block, we used a modified spider silk sequence, predicted to be unstructured. In each terminus, folded globular blocks were used. We studied the kinetics and mechanisms of phase formation and analyzed the evolving structures and their viscoelastic properties. Individual droplets were studied with a micropipette technique, showing both how properties vary between individual drops and explaining overall bulk rheological properties. A very low surface energy allowed easy deformation of droplets and led to efficient infiltration into cellulosic fiber networks. Based on these findings, we demonstrated an efficient use of the phase-separated material as an adhesive for cellulose. We also conclude that the condensed state is metastable, showing an ensemble of properties in individual droplets and that an understanding of protein phase behavior will lead to developing a wider use of proteins as structural polymers.
Liquid-liquid phase separation of biomacromolecules plays a critical role in many of their functions, both as cellular components and in structural assembly. Phase separation is also a key mechanism in the assembly of engineered recombinant proteins for the general aim to build new materials with unique structures and properties. Here the phase separation process of an engineered protein with a block-architecture was studied. As a central block, we used a modified spider silk sequence, predicted to be unstructured. In each terminus, folded globular blocks were used. We studied the kinetics and mechanisms of phase formation and analyzed the evolving structures and their viscoelastic properties. Individual droplets were studied with a micropipette technique, showing both how properties vary between individual drops and explaining overall bulk rheological properties. A very low surface energy allowed easy deformation of droplets and led to efficient infiltration into cellulosic fiber networks. Based on these findings, we demonstrated an efficient use of the phase-separated material as an adhesive for cellulose. We also conclude that the condensed state is metastable, showing an ensemble of properties in individual droplets and that an understanding of protein phase behavior will lead to developing a wider use of proteins as structural polymers.
Some proteins
show phase separation,
leading to the formation of a condensed protein-rich phase and a phase
depleted of protein. Such condensed phases are referred to as coacervates
or condensates.[1] Protein phase separation
is recognized in many biological systems to be either functionally
important in cell biology[2] or as an intermediate
step in the formation structural assemblies, such as adhesives[3] or in biomineralization.[4] The high concentration of protein and their increased interactions
can also lead to undesired events such as pathological aggregates.[5] It is generally understood that the weak interactions
that drive phase separation are important for subsequent assembly
steps of biological functionality. The polymer behavior of proteins
in these condensed phases is therefore of key importance for a fundamental
understanding.In many of the examples where condensation leads
to materials,
the condensation occurs with only one species of protein, such as
squid-beak protein,[6] nacre,[4] and mussel[7] or sandcastle adhesives.[8] Such phase separation of a single component is
often referred to as self-coacervation.[9] Often these proteins are intrinsically disordered.[10] While a high protein concentration and favorable preorganization
is beneficial in fiber assembly, condensates also show additional
advantages when functioning as adhesives. One is that condensates
have a low surface energy that allows them to efficiently infiltrate
porous structures and to wet their internal surfaces. Condensates
that function extracellularly also prevent the dissolution of the
adhesive into the environment, which is especially important in marine
adhesives. The high protein concentration and their increased interactions
can also lead to a rapid trigger of adhesion and curing.[3,8]Here we describe the detailed
characterization of spider silk (spidroin)-inspired
protein coacervates and their use as adhesives for cellulosic materials.
Applications involving cellulose are rapidly expanding due to its
excellent structural and functional properties in combination with
new ways to process and use it.[11] Consequently,
new types of biological materials are expected. We noted previously
that a block-architecture in which a spidroin repetitive sequence
is flanked in both N and C termini by folded domains leads to a self-coacervating
phase behavior[12] (Figures A and S1–S4). The general architecture was important for coacervation, and the
same behavior was achieved even with other unrelated proteins used
as terminal domains. The block design of the recombinant proteins
was inspired by the structure of spidroins,[13] but it does not necessarily follow that the mechanisms described
here apply for native spidroins. The repetetitive spidroin sequence
used here was an engineered version containing 12 repeats of residues
325–368 of the load-bearing repetitive major ampullate spidroin
3 from Aaraneus diadematus (eADF3).[14−16] The main feature in the primary structure of this protein is the
repetition of short poly-A stretches flanked by P-, G-, and Q-rich
stretches (Figure S5). This results in a
sequence with alternating hydrophobic and hydrophilic properties[17] and a high predicted disorder tendency.[18] As terminal blocks, the structurally folded
and thermally stable family 3 cellulose-binding module (CBM)[19] from the Clostridium thermocellum cellulosome were used. These blocks show a high affinity toward
cellulose. Linkers between blocks were from the major ampullate spidroin
1 from Euprosthenops australis.[20]
Figure 1
Self-coacervation
of CBM-eADF3-CBM. (A) Schematic representation
of the engineered CBM-eADF3-CBM fusion protein. Plots show hydrophobicity
(Hopp and Wood scale) and disorder tendency profiles. (B) SDS-PAGE
of CBM-eADF3-CBM. (C) Liquid–liquid phase separation of the
CBM-eADF3-CBM in pure water. (D) ATR-FTIR spectra of 30% w/v LLC solution
(blue line) and extracted natural spider silk solution (red line),
showing similar signals in regions sensitive to secondary structure.
(E) Pulling apart a drop of LLC between fingers results in the formation
of continuous filaments and illustrates its viscoelastic and adhesive
behavior.
Self-coacervation
of CBM-eADF3-CBM. (A) Schematic representation
of the engineered CBM-eADF3-CBM fusion protein. Plots show hydrophobicity
(Hopp and Wood scale) and disorder tendency profiles. (B) SDS-PAGE
of CBM-eADF3-CBM. (C) Liquid–liquid phase separation of the
CBM-eADF3-CBM in pure water. (D) ATR-FTIR spectra of 30% w/v LLC solution
(blue line) and extracted natural spider silk solution (red line),
showing similar signals in regions sensitive to secondary structure.
(E) Pulling apart a drop of LLC between fingers results in the formation
of continuous filaments and illustrates its viscoelastic and adhesive
behavior.Closer examination of the dense phase
revealed that it consists
of small droplets. To make a distinction to previously described phase
separation that was achieved by adding potassium phosphate, we name
the system under study here LLC (liquid-like coacervate (or condensate)).[12] The LLCs form spontaneously when protein concentration
is a high and ionic strength is low. The LLC-containing phase remained
stable at even 30% protein concentration. Interestingly, the ATR-FTIR
spectra which is sensitive to secondary structure conformation showed
similarity to dissected spider silk dope (Figure D). The LLC solution showed a high adhesiveness
to surfaces and forming long filaments when pulled apart (Figure E).To address the question of how
LLC droplets formed and grew, we
used spatial light interference microscopy (SLIM). With this interferometry-based
method, dry mass can be measured in a microscope setup.[21] We observed how independent drops emerged in
a previously mixed sample (Figure A, Videos 1 and 2 and Figure S6).
The curves showing an increase in dry mass were obtained by identifying
spots were droplets appeared and recording integrated mass content
of that location in video replays. After droplet initiation, a linear
region of growth occurred until a slow leveling of the growth rate.
Droplets grew larger by coalescence with droplet fusions adding to
dry mass in an additive way as expected (Figure B, Video 3). The
ratio of dry mass in a droplet to dry mass of a droplet-free surrounding
of the same size was calculated for a sample of 15 droplets and gave
a ratio of 140 with a standard deviation (SD) of 51.
Figure 2
Formation and growth
of LLC droplets. (A) Dry mass vs time for
13 LLC droplets that nucleated and grew at multiple sites. (B) Coalescence
of three individual LLC droplets, each varying in size and protein
content, resulting in an increase in the protein content of the main
droplet after each fusion. (C) Recovery curves for the fluorescence
signal after photobleaching of a LLC and its surrounding. (D) SLIM
and SEM images of the LLC droplets. The SEM shows an internal bicontinuous
structure.
Formation and growth
of LLC droplets. (A) Dry mass vs time for
13 LLC droplets that nucleated and grew at multiple sites. (B) Coalescence
of three individual LLC droplets, each varying in size and protein
content, resulting in an increase in the protein content of the main
droplet after each fusion. (C) Recovery curves for the fluorescence
signal after photobleaching of a LLC and its surrounding. (D) SLIM
and SEM images of the LLC droplets. The SEM shows an internal bicontinuous
structure.In a solution
containing LLCs, the diffusivities of molecules in
both the surroundings and within the LLCs were measured using fluorescence
recovery after photobleaching (FRAP; Video 4). Proteins in the surroundings showed diffusion constants ranging
from 2.3 × 10–7 cm2 s–1 to 7 × 10–6 cm2 s–1 (Figure C). The
proteins within the coacervates moved much slower with diffusion constants
from 1 × 10–9 cm2 s–1 to 10 × 10–9 cm2 s–1. Probing droplets of different size showed significant variation
in the diffusion rates (Figure C). Analyzing the internal structure of the condensed LLC
droplets using cryo-fracturing and high-resolution SEM imaging (Figure D) showed that the
proteins are internally assembled in an interconnected bicontinuous
network.Shear rate dependent viscosity measurements showed that a
solution
containing LLCs showed shear thinning with increasing shear rates.
At the onset of shear, the LLC containing solution had a viscosity
of 490 Pa·s (Figure A). However, above the critical shear rate of 0.002 s–1, the solution showed shear thinning. At a shear rate
of 0.87 s–1 the viscosity had dropped to 60 Pa·s.
In an oscillatory shear stress test, LLC containing solutions showed
a shear-induced gelation with gradual viscoelastic stiffening with G′ ≫ G″, that is,
a dominant elastic response (Figure B).
Figure 3
Properties of bulk and individual LLC droplets. (A) Viscosity of
30% w/v protein solution containing LLC droplets as the function of
shear rate, showing shear-thinning (red squares show viscosity and
blue circles force). (B) Shear-induced gelation during oscillatory
viscosity measurement (G′: storage modulus
(black squares) and G′′: loss modulus
(red circles)). (C) Phase contrast images of an individual LLC droplet
during micropipette aspiration experiment. Plots show an aspiration
curve and the calculated interfacial energy, Young’s modulus,
and viscosity as a function of droplet size.
Properties of bulk and individual LLC droplets. (A) Viscosity of
30% w/v protein solution containing LLC droplets as the function of
shear rate, showing shear-thinning (red squares show viscosity and
blue circles force). (B) Shear-induced gelation during oscillatory
viscosity measurement (G′: storage modulus
(black squares) and G′′: loss modulus
(red circles)). (C) Phase contrast images of an individual LLC droplet
during micropipette aspiration experiment. Plots show an aspiration
curve and the calculated interfacial energy, Young’s modulus,
and viscosity as a function of droplet size.However, as the bulk viscosity properties must
be affected by the
properties of the LLC droplets contained inside, an analysis of the
properties of individual LLC droplets within the dilute phase was
made. Measurements were made by aspiration with a micropipette submerged
in the solution (Figure C, Video 4, Figures S7 and S8). In addition to viscosity, we could measure additional
characteristics (Figure A), such as modulus and surface tension, by independent analysis
in situ. The individual LLC droplets demonstrated viscoelastic properties.
This was evident from the creep behavior in the aspiration and retraction
curves (Figure S9), with an initial elastic
regime which was followed by a linear viscous regime. Droplets had
low viscosities ranging from 1 to 74 Pa·s, and Young’s
moduli ranging from 1.3 to 43 Pa. The surface tension was also very
low, with values ranging from 7 to 76 μNm–1. As with measurements of diffusion rates, there was a considerable
range of values spanning an approximately 10-fold range for all parameters.
However, all measured droplets had an overall very low interfacial
energy and a high deformability. As expected from the combination
of low surface energy and low viscosity, the LLC droplets were easily
deformed during flow (Figure A and Video 6). Freezing a sample
very quickly after deformation using liquid ethane and cryo-fracturing
showed by SEM imaging how the internal bicontinuous structure deformed
and elongated together with the droplet (Figure A) with compression and stretching of the
bicontinuous structure, leading to a partial alignment of the network
components.
Figure 4
Fluid behavior of LLC and infiltration of cellulose fiber
networks.
(A) SLIM image of LLC deformation under shear. High-resolution cryo-fractured
SEM image showing the deformation of the internal bicontinuous structure
under shear. The blue arrow indicates direction of shear flow. (B)
Infiltration and adhesion of LLC droplets (indicated with yellow arrows)
on the surface and at the junctions of cotton fibers.
Fluid behavior of LLC and infiltration of cellulose fiber
networks.
(A) SLIM image of LLC deformation under shear. High-resolution cryo-fractured
SEM image showing the deformation of the internal bicontinuous structure
under shear. The blue arrow indicates direction of shear flow. (B)
Infiltration and adhesion of LLC droplets (indicated with yellow arrows)
on the surface and at the junctions of cotton fibers.The behavior of the droplets provides an understanding
of the bulk
rheology in general terms. The elongation of droplets during deformation
is expected to lead to a shear thinning, as elongated drops slide
more easily past each other. The observed shear-induced gelation with
a high ratio of elastic modulus to loss modulus is likewise expected
since elongated droplets are induced by shear. The elastic recovery
is expected as elongated droplets regain their spherical shapes. Overall,
the bulk properties are reminiscent of many previously described occurrences
of coacervates, such as marine adhesives and in the formation processes
of squid beaks.[6] In the squid beak formation,
the combination of properties allows efficient impregnation and cross-linking
of a chitin network. Interestingly, both systems have a very similar
viscosity of around 300–500 Pa·s at the onset of shear.
Furthermore, recDgHBP-1 also exhibited shear-thinning behavior,[6] however, at a greater shear rate 0.3 s–1.Following the above considerations, we studied how droplets
would
interact with stiff networks of cellulose fibrils. In Figure B, it can be seen how droplets
of LLC easily stick to cellulose fibers and infiltrate networks of
these. The LLC droplets easily penetrated networks and filled space
in-between fibers. Individual droplets showed stickiness to cellulose
fibers.We next studied how the silk inspired
protein functioned as an
adhesive, as it showed properties expected to be beneficial, such
as low surface energy, high protein concentration, high infiltration
capability, and intermolecular interactions (Figure F). The CBM-eADF3-CBM interactions are evident
even in conditions where the sample has been dried, as shown by breaking
a sample of dried on a surface[12] (Figure S10). The protein forms long fibers that
span the cracks that formed during breakage, demonstrating a possible
cohesive mechanism similar to that known as necking in polymer science.[22]Figure A displays the bond strength of coacervated CBM-eADF3-CBM
at 30% w/v that was used to adhere different cellulosic materials
such as nanofibrillated cellulose of both bacterial and plant origin,
cotton, office paper, and wood. After application, samples were allowed
to solidify and cure at ambient conditions after water evaporation
(Figure S11). Bond strengths varied between
15 and 75 Ncm–2, depending on the type of cellulosic
substrate. This suggested an influence of inherent nano- and microstructured
features on the bond strength, also possibly reflecting differences
in pore size and surface properties of the different celluloses. Of
all samples, bacterial cellulose had the highest bond strength. Decreasing
the mass of the adhesive solution showed a substantial decrease in
the bonding strength (Figure S12A). Controls
made with different variations of blocks or the unrelated bovine serum
albumin (BSA; Figures B and S12B) showed lower strength but
also a much lower work of fracture, corresponding to the area under
the fracture curve. SEM of the fractured surface of the specimens
after tensile measurement test reviled that almost in all the cases
debonding occurred due to structural failure of the bulk material,
not the adhesive (Figures C and S13), suggesting that the
adhesive formed a very strong interfacial bond (Figure D and Videos 6 and 7) to the cellulosic surfaces. However,
debonding of the wood and cotton textile happened cohesively, and
left adhesive on both surfaces illustrating that cracks propagated
through the adhesive.
Figure 5
Bond strength of the coacervated CBM-eADF3-CBM. (A) Representative
lap-shear strength curve for various cellulosic material. Column plot
shows calculated the mean and standard deviation of the lap-shear
strength (N = 5). (B) Representative lap-shear strength
curves of bacterial cellulose glued by CBM-eADF3-CBM (black), eADF3
(red), CBM-CBM (blue), a mixture of eADF3 and CBM-CBM (yellow), and
bovine serum albumin (BSA) (green). (C) SEM micrographs from the surface
of debonded specimens for the corresponding specimens after tensile
measurement. (D) Illustrating the adhesive strength of the LLC by
hanging a 4.5 kg weight from two pieces of glued bacterial cellulose
mat.
Bond strength of the coacervated CBM-eADF3-CBM. (A) Representative
lap-shear strength curve for various cellulosic material. Column plot
shows calculated the mean and standard deviation of the lap-shear
strength (N = 5). (B) Representative lap-shear strength
curves of bacterial cellulose glued by CBM-eADF3-CBM (black), eADF3
(red), CBM-CBM (blue), a mixture of eADF3 and CBM-CBM (yellow), and
bovine serum albumin (BSA) (green). (C) SEM micrographs from the surface
of debonded specimens for the corresponding specimens after tensile
measurement. (D) Illustrating the adhesive strength of the LLC by
hanging a 4.5 kg weight from two pieces of glued bacterial cellulose
mat.In summary, protein condensates should
be seen as an essential
aspect of polymer behavior for proteins and represent a key step for
understanding when expanding the use of proteins for new uses such
as adhesives. By using highly accurate methods of in situ protein
concentration measurements, diffusivity measurements, and rheology
of individual droplets, we found that the droplets showed a range
of properties indicating that they are thermodynamically metastable,
with varying properties between individual drops. Overall, the protein
showed unique phase behavior and molecular structuring into highly
deformable and low-interfacial energy assemblies. We showed how the
preassemblies of the highly concentrated droplet in combination with
low interfacial energy and cohesiveness could be efficiently employed
as an intermediate state for strong adhesive assembly between cellulosic
surfaces.
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