Literature DB >> 30254162

On the control of the proton current in the voltage-gated proton channel Hv1.

Myungjin Lee1, Chen Bai1, Mikolaj Feliks1, Raphael Alhadeff2, Arieh Warshel2.   

Abstract

The nature of the action of voltage-activated proton transport proteins is a conundrum of great current interest. Here we approach this issue by exploring the action of Hv1, a voltage-gated proton channel found in different cells in humans and other organisms. Our study focuses on evaluating the free energy of transporting a proton through the channel, as well as the effect of the proton transfer through D112, in both the closed and open channel conformations. It is found that D112 allows a transported proton to bypass the electrostatic barrier of the open channel, while not being able to help in passing the barrier in the closed form. This reflects the change in position of the gating arginine residues relative to D112, upon voltage activation. Significantly, the effect of D112 accounts for the observed trend in selectivity by overcoming the electrostatic barrier at its highest point. Thus, the calculations provide a structure/function correlation for the Hv1 system. The present work also clarifies that the action of Hv1 is not controlled by a Grotthuss mechanism but, as is always the case, by the protein electrostatic potential at the rate-limiting barriers.

Entities:  

Keywords:  Hv1; proton channel; proton selectivity; voltage-gated channel

Mesh:

Substances:

Year:  2018        PMID: 30254162      PMCID: PMC6187172          DOI: 10.1073/pnas.1809766115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

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6.  Microsecond timescale MD simulations at the transition state of PmHMGR predict remote allosteric residues.

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7.  Gating Mechanism of the Voltage-Gated Proton Channel Studied by Molecular Dynamics Simulations.

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8.  Mechanism Study of Proteins under Membrane Environment.

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  8 in total

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