Literature DB >> 30245322

An integrated microfluidic platform to perform uninterrupted SELEX cycles to screen affinity reagents specific to cardiovascular biomarkers.

Anirban Sinha1, Priya Gopinathan1, Yi-Da Chung2, Hsin-Ying Lin3, Kuang-Hsien Li4, Hsi-Pin Ma4, Po-Chiun Huang4, Shu-Chu Shiesh5, Gwo-Bin Lee6.   

Abstract

As cardiovascular diseases (CVD) are responsible for millions of deaths annually, there is a need for rapid and sensitive diagnosis of CVD at earlier stages. Aptamers generated by systematic evolution of ligands by exponential enrichment (SELEX) processes have been shown to be superior to conventional antibody-based cardiac biomarker detection. However, SELEX is a complicated, lengthy procedure requiring multiple rounds of extraction/amplification and well-trained personnel. To circumvent such issue, we designed an automated, miniaturized SELEX platform for the screening of aptamers towards three protein biomarkers associated with CVDs: N-terminal pro-peptide of B-type natriuretic peptide, human cardiac troponin I, and fibrinogen. The developed microfluidic platform was equipped with microfluidic devices capable of sample transport and mixing along with an on-chip nucleic acid amplification module such that the entire screening process (5 rounds of selection in 8 h.) could be performed consecutively on a single chip while consuming only 35 µL of reagents in each cycle. This system may therefore serve as a promising, sensitive, cost-effective platform for the selection of aptamers specific for CVD biomarkers.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biomarkers; Fibrinogen; Human cardiac troponin I; Microfluidics; NT-proBNP; SELEX

Mesh:

Substances:

Year:  2018        PMID: 30245322     DOI: 10.1016/j.bios.2018.09.040

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  5 in total

1.  On-chip selection of adenosine aptamer using graphene oxide-coated magnetic nanoparticles.

Authors:  Hosub Lim; Junhyuck Chang; Kyung-Il Kim; Youngkwang Moon; Saebom Lee; Byoungsang Lee; Jung Heon Lee; Jinkee Lee
Journal:  Biomicrofluidics       Date:  2022-07-28       Impact factor: 3.258

Review 2.  Aptamers Targeting Cardiac Biomarkers as an Analytical Tool for the Diagnostics of Cardiovascular Diseases: A Review.

Authors:  Natalia Komarova; Olga Panova; Alexey Titov; Alexander Kuznetsov
Journal:  Biomedicines       Date:  2022-05-06

3.  Identification of nucleic acid aptamers against lactate dehydrogenase via SELEX and high-throughput sequencing.

Authors:  Linghui Guo; Ying Song; Yanwen Yuan; Jinlei Chen; Haifeng Liang; Fei Guo; Zhi Yu; Pei Liang; Yapei Wang; Pu Wang
Journal:  Anal Bioanal Chem       Date:  2021-05-24       Impact factor: 4.142

Review 4.  Aptamer-Based Biosensors for the Colorimetric Detection of Blood Biomarkers: Paving the Way to Clinical Laboratory Testing.

Authors:  Anna Davydova; Mariya Vorobyeva
Journal:  Biomedicines       Date:  2022-07-06

Review 5.  Advances in Screening and Development of Therapeutic Aptamers Against Cancer Cells.

Authors:  Zheng Li; Xuekun Fu; Jie Huang; Peiyuan Zeng; Yuhong Huang; Xinxin Chen; Chao Liang
Journal:  Front Cell Dev Biol       Date:  2021-05-19
  5 in total

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