Literature DB >> 30237953

The draft genome sequence of Clostridium sp. strain LJ4 with high furan and phenolic derivates' tolerances occurring from lignocellulosic hydrolysates.

Jie Liu1, Yujia Jiang1, Tianpeng Chen1, Weiliang Dong1,2, Wenming Zhang1,2, Jiangfeng Ma1,2, Min Jiang1,2, Fengxue Xin1,2.   

Abstract

The genome of a wild-type solventogenic Clostridium sp. strain LJ4 that could directly convert undetoxified lignocellulosic hydrolysate to butanol and tolerate high concentration of furan and phenolic derivates occurring in the lignocellulosic hydrolysate is described. 16S rDNA gene sequencing and analysis indicated that it is closely related to Clostridium acetobutylicum. The genome size of strain LJ4 is 3.90 Mp, which has a G + C content of 30.72% and encodes 2711 proteins. It also has one 0.19 Mp plasmid with 181 predicted encoding proteins. Alcohol dehydrogenases (ADs) and a nicotinamide adenine dinucleotide phosphate (NADPH)-dependent flavin mononucleotide (FMN) reductase were identified, which may play key roles in inhibitors' resistance in lignocellulosic hydrolysate.

Entities:  

Keywords:  Alcohol dehydrogenases; Clostridium; Draft genome sequencing; Furan and phenolic derivates; NADPH-dependent FMN reductase

Year:  2018        PMID: 30237953      PMCID: PMC6138001          DOI: 10.1007/s13205-018-1430-9

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  21 in total

1.  High-efficient production of biobutanol by a novel Clostridium sp. strain WST with uncontrolled pH strategy.

Authors:  Sabarathinam Shanmugam; Chongran Sun; Xiaoming Zeng; Yi-Rui Wu
Journal:  Bioresour Technol       Date:  2018-02-20       Impact factor: 9.642

2.  Biotransformation of furfural and 5-hydroxymethyl furfural (HMF) by Clostridium acetobutylicum ATCC 824 during butanol fermentation.

Authors:  Yan Zhang; Bei Han; Thaddeus Chukwuemeka Ezeji
Journal:  N Biotechnol       Date:  2011-09-10       Impact factor: 5.079

3.  Detoxification of furfural residues hydrolysate for butanol fermentation by Clostridium saccharobutylicum DSM 13864.

Authors:  Jin-Jun Dong; Rui-Zhi Han; Guo-Chao Xu; Lei Gong; Wan-Ru Xing; Ye Ni
Journal:  Bioresour Technol       Date:  2018-02-23       Impact factor: 9.642

Review 4.  Biomass, strain engineering, and fermentation processes for butanol production by solventogenic clostridia.

Authors:  Sang-Hyun Lee; Eun Ju Yun; Jungyeon Kim; Sang Jun Lee; Youngsoon Um; Kyoung Heon Kim
Journal:  Appl Microbiol Biotechnol       Date:  2016-08-16       Impact factor: 4.813

Review 5.  Butanol production from lignocellulosics.

Authors:  German Jurgens; Shrikant Survase; Oxana Berezina; Evangelos Sklavounos; Juha Linnekoski; Antti Kurkijärvi; Minna Väkevä; Adriaan van Heiningen; Tom Granström
Journal:  Biotechnol Lett       Date:  2012-04-24       Impact factor: 2.461

6.  Clostridium beijerinckii mutant with high inhibitor tolerance obtained by low-energy ion implantation.

Authors:  Ting Guo; Yan Tang; Qiu-Yan Zhang; Teng-Fei Du; Da-Feng Liang; Min Jiang; Ping-Kai Ouyang
Journal:  J Ind Microbiol Biotechnol       Date:  2011-07-26       Impact factor: 3.346

7.  Enhanced biotransformation of furfural and hydroxymethylfurfural by newly developed ethanologenic yeast strains.

Authors:  Z Lewis Liu; Patricia J Slininger; Steve W Gorsich
Journal:  Appl Biochem Biotechnol       Date:  2005       Impact factor: 2.926

8.  Multiple gene-mediated NAD(P)H-dependent aldehyde reduction is a mechanism of in situ detoxification of furfural and 5-hydroxymethylfurfural by Saccharomyces cerevisiae.

Authors:  Z Lewis Liu; Jaewoong Moon; Brad J Andersh; Patricia J Slininger; Scott Weber
Journal:  Appl Microbiol Biotechnol       Date:  2008-09-23       Impact factor: 4.813

9.  Rfam 12.0: updates to the RNA families database.

Authors:  Eric P Nawrocki; Sarah W Burge; Alex Bateman; Jennifer Daub; Ruth Y Eberhardt; Sean R Eddy; Evan W Floden; Paul P Gardner; Thomas A Jones; John Tate; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2014-11-11       Impact factor: 19.160

10.  Enhanced phenolic compounds tolerance response of Clostridium beijerinckii NCIMB 8052 by inactivation of Cbei_3304.

Authors:  Jun Liu; Qinlu Lin; Xueying Chai; Yunchuan Luo; Ting Guo
Journal:  Microb Cell Fact       Date:  2018-03-03       Impact factor: 5.328

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  1 in total

Review 1.  Purification, biochemical characterization and fibrinolytic potential of proteases produced by bacteria of the genus Bacillus: a systematic literature review.

Authors:  Arthur Hipólito Pereira Leite; Ítalo Henrique Alves da Silva; Lorenzo Pastrana; Thiago Pajeú Nascimento; Adriana Maria da Silva Telles; Ana Lúcia Figueiredo Porto
Journal:  Arch Microbiol       Date:  2022-07-19       Impact factor: 2.667

  1 in total

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