Literature DB >> 30225102

Crystal structure of tebipenem pivoxil.

Chao Tang1, Li Cai2, Shuai Liu1, Zhiwei Zheng1, Gen Li1, Jianli Chen1, Qiang Sui1.   

Abstract

The mol-ecular structure of the first orally active carbapenem anti-bacterial agent, tebipenem pivoxil (systematic name: (2,2-di-methyl-propano-yloxy)methyl (4R,5S,6S)-3-{[1-(4,5-di-hydro-1,3-thia-zol-2-yl)azetidin-3-yl]sulfanyl}-6-[(1R)-1-hy-droxy-eth-yl]-4-methyl-7-oxo-1-aza-bicyclo-[3.2.0]hept-2-ene-2-carboxyl-ate), C22H31N3O6S2, has been determined and the configurations of the four chiral centers validated. The title compound crystallizes in the triclinic space group P1 with one mol-ecule in the unit cell. Three out of the four rings adopt planar conformations while the thia-zolinyl ring adopts an enveloped conformation. In the crystal, O-H⋯N hydrogen bonds link the mol-ecules into chains along [10].

Entities:  

Keywords:  anti­biotics; carbapenem; crystal structure; hydrogen bonding; prodrug; tebipenem

Year:  2018        PMID: 30225102      PMCID: PMC6127708          DOI: 10.1107/S2056989018010770

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Carbapenem anti­biotics, like all β-lactam anti­bacterials that bind to and inhibit the peptidoglycan cross-linking transpeptidases, have attracted increasing attention recently because of their broader spectrum activities and stronger bactericidal actions compared to cephalosporins and penicillins. Since the first carbapenem structure thienamycin, a natural product derived from Streptomyces cattleya, was isolated in 1976 (Johnston et al., 1978 ▸), a handful of subsequent parenteral carbapenem agents, such as imipenem, panipenem, meropenem, biapenem, have been developed based on this parent compound and used clinically for the treatment of severe bacterial infections. Tebipenem pivoxil (see scheme), as a novel oral carbapenem agent, was approved by the Pharmaceuticals and Medical Devices Agency of Japan (PMDA) on Apr 22, 2009. It was developed and marketed as Orapenem® by Meiji Seika in Japan (as of 05/16/2016, the only approved country/area for its usage was Japan for treating children, as these oral anti­biotics are often better tolerated than infusions) (Kijima et al., 2009 ▸). It is a prodrug that is quickly hydrolysed to the active anti­microbial agent LJC11,036 (5, reaction scheme) because the absorption rate of the pivaloyloxymethyl ester is higher than that of other prodrug-type β-lactam anti­biotics (Kato et al., 2010 ▸). The active metabolite 5 shows potent and well-balanced anti­bacterial activity and also shows higher stability to human renal de­hydro­peptidase-I than meropenem (Isoda et al., 2006a ▸; Kobayashi et al., 2005 ▸). Research has also revealed that the tebipenbem ac­yl–β-lactamase covalent complex remains very stable for longer than 90 min, partly explaining its resistance towards hydrolysis (Papp-Wallace et al., 2011 ▸). Tebipenem pivoxil has a complex structure with four chiral centers and a 1-(1,3-thia­zolin-2-yl)azetidin-3-yl­thio side chain at the C-2 position. We hope the structural elucidation will facilitate future mechanistic studies of this mol­ecule and of its inter­actions with enzymes that are responsible for bacterial resistance.

Structural commentary

Tebipenem pivoxil (Fig. 1 ▸) crystallizes in the triclinic space group P1 with one mol­ecule in the unit cell. The present crystal structure dertermination allowed the configurations of the four chiral centers to be validated as: C2S, C3S, C4R, C7R. Rings I (N1/C1–C3), II (N1/C3–C6) and III (N2/C11C13) adopt planar conformations (with r.m.s. deviations of 0.0251, 0.0838, and 0.0967 Å, respectively) while ring IV (N3/S2/C14–C16) adopts an envelope conformation with atom C16 as the flap. The dihedral angles between rings I and II, II and III, and III and IV are 46.7 (2), 85.7 (2), and 11.9 (4)°, respectively. Atoms C9 (meth­yl) and C7 are located above and below the planes of rings I and II because of steric hindrance.
Figure 1

The mol­ecular structure of the title compound, showing the atom labelling and 30% probability displacement ellipsoids.

Supra­molecular features

In the crystal, O—H⋯N hydrogen bonds (Table 1 ▸) link the mol­ecules into chains along [10]. C—H⋯O hydrogen bonds are also observed. The packing viewed along the a axis is shown in Fig. 2 ▸.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2A⋯N3i 0.822.012.816 (6)169
C11—H11A⋯O2ii 0.982.433.366 (6)160

Symmetry codes: (i) ; (ii) .

Figure 2

The crystal packing viewed along the crystallographic a axis showing the O—H⋯N hydrogen bonds (Table 1 ▸) as dashed lines.

Database survey

The tebipenem pivoxil we obtained was well characterized spectroscopically and carefully compared with reference values (Isoda et al., 2006a ▸). To the best of our knowledge, including a search of the Cambridge Structural Database (CSD Version 5.39; Groom et al., 2016 ▸), no single crystal structure determination has previously been reported for this drug.

Synthesis and crystallization

As shown in the reaction scheme (also see Supporting Information), 3-mercapto-1-(1,3-thia­zolin-2-yl)-azetidine hydro­chloride (3) was first synthesized according to a method previously reported (Isoda et al., 2006b ▸) with minor optimizations. The side chain 3 was then coupled with the commercially available carbapenem core (2), followed by hydrogenation/deprotection and SN2 esterification to afford the desired tebipenem pivoxil 1 (Isoda et al., 2006a ▸,b ▸). Instead of using column chromatography, we successfully obtained pure tebipenem pivoxil on a relatively large scale through recrystallization from ethyl acetate, yielding colourless block-shaped crystals. The HPLC spectrum of the final product showed a single peak with less than 0.1% of impurities. [α]D 8 = +9.6°, m.p. = 407–409 K. Elemental analysis calculated for C22H31N3O6S2: C, 53.10; H, 6.28; N, 8.44; S, 12.89; Found: C, 53.13; H, 6.32; N, 8.45; S, 12.94. HRESI–MS calculated for C22H32N3O6S2 ([M + H]+): 498.1727, found: 498.1867. The structure has also been characterized with 1H NMR, 13C NMR, and IR spectroscopy. 1H NMR, 13C NMR, and IR spectra of tebipenem pivoxil 1 are included in the supporting information and compared with reference values, including the assignment of NMR chemical shifts and IR absorption bands (Isoda et al., 2006a ▸).

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. In the refinement, all H atoms were positioned geometrically and refined as riding: C—H = 0.96–0.98 Å with U iso(H) = 1.2U eq(C) or 1.5U eq(C-meth­yl).
Table 2

Experimental details

Crystal data
Chemical formulaC22H31N3O6S2
M r 497.62
Crystal system, space groupTriclinic, P1
Temperature (K)296
a, b, c (Å)7.7292 (10), 7.9892 (9), 11.2035 (13)
α, β, γ (°)108.300 (7), 92.553 (7), 101.499 (8)
V3)639.36 (14)
Z 1
Radiation typeCu Kα
μ (mm−1)2.23
Crystal size (mm)0.17 × 0.12 × 0.10
 
Data collection
DiffractometerBruker APEXII CCD
Absorption correctionMulti-scan (SADABS; Bruker, 2014)
T min, T max 0.703, 0.808
No. of measured, independent and observed [I > 2σ(I)] reflections3454, 2483, 2389
R int 0.019
(sin θ/λ)max−1)0.592
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.042, 0.115, 1.04
No. of reflections2483
No. of parameters298
No. of restraints3
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.33, −0.21
Absolute structureFlack x determined using 531 quotients [(I +)−(I )]/[(I +)+(I )] (Parsons et al., 2013)
Absolute structure parameter0.140 (12)

Computer programs: APEX2 and SAINT (Bruker, 2014 ▸), SHELXS2018/3 and SHELXTL (Sheldrick, 2008 ▸) and SHELXL2018/3 (Sheldrick, 2015 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989018010770/ex2010sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018010770/ex2010Isup2.hkl Synthetic conditions and 1H NMR, 13C NMR, and IR spectra of tebipenem pivoxil.. DOI: 10.1107/S2056989018010770/ex2010sup3.pdf Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989018010770/ex2010Isup4.cml CCDC reference: 1816052 Additional supporting information: crystallographic information; 3D view; checkCIF report
C22H31N3O6S2Z = 1
Mr = 497.62F(000) = 264
Triclinic, P1Dx = 1.292 Mg m3
a = 7.7292 (10) ÅCu Kα radiation, λ = 1.54178 Å
b = 7.9892 (9) ÅCell parameters from 2598 reflections
c = 11.2035 (13) Åθ = 4.2–65.6°
α = 108.300 (7)°µ = 2.23 mm1
β = 92.553 (7)°T = 296 K
γ = 101.499 (8)°Block, colorless
V = 639.36 (14) Å30.17 × 0.12 × 0.10 mm
Bruker APEXII CCD diffractometer2389 reflections with I > 2σ(I)
φ and ω scansRint = 0.019
Absorption correction: multi-scan (SADABS; Bruker, 2014)θmax = 65.9°, θmin = 4.2°
Tmin = 0.703, Tmax = 0.808h = −7→9
3454 measured reflectionsk = −9→9
2483 independent reflectionsl = −13→12
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.042w = 1/[σ2(Fo2) + (0.0826P)2 + 0.0878P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.115(Δ/σ)max = 0.015
S = 1.04Δρmax = 0.33 e Å3
2483 reflectionsΔρmin = −0.21 e Å3
298 parametersAbsolute structure: Flack x determined using 531 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
3 restraintsAbsolute structure parameter: 0.140 (12)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
S10.33764 (12)0.37913 (11)0.01567 (9)0.0531 (3)
S20.6657 (3)0.6243 (2)0.50488 (14)0.0889 (5)
O1−0.0384 (5)0.8665 (5)−0.1269 (3)0.0695 (9)
O2−0.0964 (4)1.0714 (4)0.1973 (3)0.0601 (8)
H2A−0.1398071.1525530.2405660.090*
O30.4728 (4)0.6066 (5)−0.1353 (3)0.0626 (8)
O40.3985 (4)0.8733 (4)−0.1081 (3)0.0589 (8)
O50.4493 (5)1.0081 (6)−0.2577 (4)0.0781 (11)
O60.2673 (7)0.7659 (6)−0.3881 (6)0.1060 (16)
N10.1226 (4)0.7928 (4)0.0285 (3)0.0447 (7)
N20.5213 (7)0.3896 (6)0.2801 (4)0.0737 (12)
N30.7629 (6)0.3330 (6)0.3725 (4)0.0679 (11)
C1−0.0250 (6)0.8214 (6)−0.0352 (4)0.0486 (9)
C2−0.1483 (5)0.7724 (5)0.0574 (4)0.0455 (8)
H2B−0.2382650.6612010.0143280.055*
C30.0144 (5)0.7296 (5)0.1179 (4)0.0442 (8)
H3B0.0507880.8086060.2057720.053*
C40.0397 (6)0.5350 (6)0.0968 (4)0.0498 (9)
H4A0.0588780.5168300.1785160.060*
C50.2114 (5)0.5408 (5)0.0341 (4)0.0437 (8)
C60.2416 (5)0.6785 (5)−0.0123 (4)0.0436 (8)
C7−0.2320 (5)0.9153 (5)0.1391 (4)0.0483 (9)
H7A−0.3168880.9440120.0852090.058*
C8−0.3299 (7)0.8508 (7)0.2361 (5)0.0651 (12)
H8A−0.4211470.7445670.1935710.098*
H8B−0.2479300.8224820.2896740.098*
H8C−0.3828090.9442590.2864730.098*
C9−0.1081 (6)0.3822 (7)0.0108 (7)0.0762 (16)
H9A−0.2153960.3793780.0508150.114*
H9B−0.1277530.402322−0.0682870.114*
H9C−0.0739700.268830−0.0041650.114*
C100.3811 (5)0.7099 (6)−0.0923 (4)0.0472 (9)
C110.2935 (6)0.3012 (6)0.1482 (5)0.0535 (10)
H11A0.1755640.2227690.1397340.064*
C120.4501 (6)0.2200 (5)0.1758 (5)0.0532 (10)
H12A0.4152440.1152920.2029180.064*
H12B0.5252360.1962470.1081460.064*
C130.3520 (6)0.4482 (6)0.2791 (5)0.0581 (11)
H13A0.3647170.5708570.2777520.070*
H13B0.2808490.4284260.3446630.070*
C140.6465 (6)0.4232 (6)0.3738 (4)0.0559 (11)
C150.8971 (11)0.4207 (12)0.4850 (8)0.116 (3)
H15A1.0043550.4820930.4610130.140*
H15B0.9271240.3290860.5168390.140*
C160.8293 (11)0.5528 (11)0.5860 (6)0.098 (2)
H16A0.9247350.6550120.6325170.118*
H16B0.7755730.4967380.6447190.118*
C170.5186 (7)0.9092 (9)−0.1956 (6)0.0739 (14)
H17A0.6343180.976545−0.1505430.089*
H17B0.5326120.796482−0.2556470.089*
C180.3224 (8)0.9266 (8)−0.3535 (5)0.0724 (14)
C190.2625 (11)1.0577 (9)−0.4111 (5)0.0854 (18)
C200.406 (2)1.2163 (17)−0.4024 (14)0.181 (6)
H20A0.4552411.276802−0.3155840.271*
H20B0.4976951.176572−0.4517230.271*
H20C0.3584951.298285−0.4341030.271*
C210.179 (2)0.9556 (19)−0.5419 (9)0.183 (6)
H21A0.0870400.855032−0.5414450.274*
H21B0.1273951.033571−0.5757740.274*
H21C0.2665960.911858−0.5933940.274*
C220.1304 (18)1.1339 (17)−0.3284 (9)0.142 (4)
H22A0.1882411.199331−0.2442990.213*
H22B0.0825581.214142−0.3618970.213*
H22C0.0359521.036984−0.3262180.213*
U11U22U33U12U13U23
S10.0556 (6)0.0528 (5)0.0564 (6)0.0265 (4)0.0067 (4)0.0168 (4)
S20.1153 (13)0.0862 (10)0.0592 (7)0.0530 (9)0.0044 (7)−0.0025 (7)
O10.078 (2)0.096 (3)0.0542 (19)0.0412 (19)0.0077 (16)0.0382 (18)
O20.0553 (17)0.0497 (16)0.070 (2)0.0134 (14)0.0171 (15)0.0107 (15)
O30.0572 (18)0.0701 (19)0.067 (2)0.0282 (17)0.0193 (15)0.0220 (16)
O40.0610 (18)0.0706 (18)0.0592 (18)0.0253 (15)0.0183 (14)0.0332 (16)
O50.081 (2)0.102 (3)0.0598 (19)0.014 (2)0.0054 (17)0.042 (2)
O60.099 (3)0.077 (3)0.126 (4)0.020 (2)−0.015 (3)0.014 (3)
N10.0461 (17)0.0475 (17)0.0448 (17)0.0201 (14)0.0055 (14)0.0155 (14)
N20.072 (3)0.076 (3)0.068 (3)0.045 (2)−0.005 (2)0.002 (2)
N30.064 (2)0.065 (2)0.064 (2)0.029 (2)−0.0105 (19)0.001 (2)
C10.050 (2)0.052 (2)0.041 (2)0.0208 (18)0.0003 (16)0.0081 (18)
C20.0405 (19)0.048 (2)0.046 (2)0.0151 (16)−0.0009 (16)0.0099 (17)
C30.043 (2)0.052 (2)0.0400 (18)0.0173 (16)0.0043 (15)0.0141 (17)
C40.044 (2)0.058 (2)0.058 (2)0.0244 (18)0.0084 (17)0.026 (2)
C50.0399 (18)0.0476 (19)0.0424 (19)0.0142 (16)−0.0011 (15)0.0112 (17)
C60.0399 (19)0.047 (2)0.0416 (18)0.0131 (16)0.0002 (14)0.0097 (16)
C70.0414 (19)0.048 (2)0.058 (2)0.0179 (17)0.0050 (17)0.0158 (18)
C80.062 (3)0.061 (3)0.079 (3)0.019 (2)0.024 (2)0.026 (2)
C90.045 (2)0.053 (3)0.129 (5)0.008 (2)0.004 (3)0.031 (3)
C100.0422 (19)0.057 (2)0.043 (2)0.0152 (19)−0.0019 (16)0.0155 (18)
C110.045 (2)0.051 (2)0.070 (3)0.0151 (18)0.0032 (19)0.026 (2)
C120.057 (2)0.043 (2)0.062 (2)0.0210 (18)0.001 (2)0.0162 (18)
C130.059 (3)0.066 (3)0.063 (3)0.035 (2)0.016 (2)0.026 (2)
C140.063 (3)0.057 (2)0.049 (2)0.025 (2)0.008 (2)0.013 (2)
C150.098 (5)0.119 (6)0.102 (5)0.055 (5)−0.043 (5)−0.016 (5)
C160.101 (5)0.115 (5)0.067 (4)0.036 (4)−0.014 (3)0.010 (4)
C170.056 (3)0.113 (4)0.070 (3)0.024 (3)0.019 (2)0.051 (3)
C180.069 (3)0.072 (3)0.069 (3)0.012 (3)0.008 (3)0.016 (3)
C190.128 (5)0.087 (4)0.048 (3)0.037 (4)0.001 (3)0.025 (3)
C200.247 (16)0.137 (9)0.167 (11)0.007 (9)−0.005 (11)0.089 (8)
C210.267 (18)0.196 (12)0.070 (5)0.079 (12)−0.037 (7)0.014 (6)
C220.190 (11)0.185 (10)0.095 (6)0.122 (9)0.017 (6)0.057 (6)
S1—C51.737 (4)C8—H8A0.9600
S1—C111.802 (4)C8—H8B0.9600
S2—C141.778 (5)C8—H8C0.9600
S2—C161.807 (7)C9—H9A0.9600
O1—C11.197 (5)C9—H9B0.9600
O2—C71.409 (5)C9—H9C0.9600
O2—H2A0.8200C11—C131.544 (7)
O3—C101.196 (5)C11—C121.546 (6)
O4—C101.354 (5)C11—H11A0.9800
O4—C171.433 (6)C12—H12A0.9700
O5—C181.323 (7)C12—H12B0.9700
O5—C171.370 (7)C13—H13A0.9700
O6—C181.198 (7)C13—H13B0.9700
N1—C11.413 (5)C15—C161.480 (11)
N1—C61.414 (6)C15—H15A0.9700
N1—C31.477 (5)C15—H15B0.9700
N2—C141.319 (6)C16—H16A0.9700
N2—C121.468 (6)C16—H16B0.9700
N2—C131.476 (6)C17—H17A0.9700
N3—C141.258 (6)C17—H17B0.9700
N3—C151.481 (7)C18—C191.523 (8)
C1—C21.527 (6)C19—C211.479 (10)
C2—C71.500 (6)C19—C201.483 (15)
C2—C31.549 (5)C19—C221.499 (13)
C2—H2B0.9800C20—H20A0.9600
C3—C41.551 (6)C20—H20B0.9600
C3—H3B0.9800C20—H20C0.9600
C4—C91.527 (7)C21—H21A0.9600
C4—C51.528 (6)C21—H21B0.9600
C4—H4A0.9800C21—H21C0.9600
C5—C61.342 (6)C22—H22A0.9600
C6—C101.466 (6)C22—H22B0.9600
C7—C81.512 (6)C22—H22C0.9600
C7—H7A0.9800
C5—S1—C11102.76 (19)C13—C11—H11A114.7
C14—S2—C1688.8 (3)C12—C11—H11A114.7
C7—O2—H2A109.5S1—C11—H11A114.7
C10—O4—C17116.1 (4)N2—C12—C1188.2 (3)
C18—O5—C17120.2 (5)N2—C12—H12A114.0
C1—N1—C6132.4 (3)C11—C12—H12A114.0
C1—N1—C393.1 (3)N2—C12—H12B114.0
C6—N1—C3108.6 (3)C11—C12—H12B114.0
C14—N2—C12128.7 (4)H12A—C12—H12B111.2
C14—N2—C13130.5 (5)N2—C13—C1188.0 (4)
C12—N2—C1392.8 (4)N2—C13—H13A114.0
C14—N3—C15111.1 (5)C11—C13—H13A114.0
O1—C1—N1131.4 (4)N2—C13—H13B114.0
O1—C1—C2136.6 (4)C11—C13—H13B114.0
N1—C1—C291.9 (3)H13A—C13—H13B111.2
C7—C2—C1118.6 (3)N3—C14—N2124.9 (5)
C7—C2—C3117.9 (3)N3—C14—S2117.5 (4)
C1—C2—C386.1 (3)N2—C14—S2117.3 (4)
C7—C2—H2B110.7N3—C15—C16111.0 (6)
C1—C2—H2B110.7N3—C15—H15A109.4
C3—C2—H2B110.7C16—C15—H15A109.4
N1—C3—C288.6 (3)N3—C15—H15B109.4
N1—C3—C4104.6 (3)C16—C15—H15B109.4
C2—C3—C4123.7 (3)H15A—C15—H15B108.0
N1—C3—H3B112.2C15—C16—S2105.3 (5)
C2—C3—H3B112.2C15—C16—H16A110.7
C4—C3—H3B112.2S2—C16—H16A110.7
C9—C4—C5109.9 (4)C15—C16—H16B110.7
C9—C4—C3115.8 (4)S2—C16—H16B110.7
C5—C4—C3100.8 (3)H16A—C16—H16B108.8
C9—C4—H4A110.0O5—C17—O4108.0 (4)
C5—C4—H4A110.0O5—C17—H17A110.1
C3—C4—H4A110.0O4—C17—H17A110.1
C6—C5—C4110.6 (4)O5—C17—H17B110.1
C6—C5—S1125.5 (3)O4—C17—H17B110.1
C4—C5—S1123.7 (3)H17A—C17—H17B108.4
C5—C6—N1110.9 (3)O6—C18—O5120.9 (6)
C5—C6—C10125.1 (4)O6—C18—C19126.3 (6)
N1—C6—C10124.0 (3)O5—C18—C19112.8 (5)
O2—C7—C2107.8 (3)C21—C19—C20113.4 (9)
O2—C7—C8111.5 (4)C21—C19—C22111.2 (10)
C2—C7—C8111.3 (4)C20—C19—C22105.0 (9)
O2—C7—H7A108.7C21—C19—C18108.6 (7)
C2—C7—H7A108.7C20—C19—C18113.3 (8)
C8—C7—H7A108.7C22—C19—C18105.0 (6)
C7—C8—H8A109.5C19—C20—H20A109.5
C7—C8—H8B109.5C19—C20—H20B109.5
H8A—C8—H8B109.5H20A—C20—H20B109.5
C7—C8—H8C109.5C19—C20—H20C109.5
H8A—C8—H8C109.5H20A—C20—H20C109.5
H8B—C8—H8C109.5H20B—C20—H20C109.5
C4—C9—H9A109.5C19—C21—H21A109.5
C4—C9—H9B109.5C19—C21—H21B109.5
H9A—C9—H9B109.5H21A—C21—H21B109.5
C4—C9—H9C109.5C19—C21—H21C109.5
H9A—C9—H9C109.5H21A—C21—H21C109.5
H9B—C9—H9C109.5H21B—C21—H21C109.5
O3—C10—O4123.8 (4)C19—C22—H22A109.5
O3—C10—C6124.3 (4)C19—C22—H22B109.5
O4—C10—C6111.9 (4)H22A—C22—H22B109.5
C13—C11—C1287.3 (3)C19—C22—H22C109.5
C13—C11—S1114.7 (3)H22A—C22—H22C109.5
C12—C11—S1107.7 (3)H22B—C22—H22C109.5
C6—N1—C1—O1−56.9 (7)C17—O4—C10—O38.5 (6)
C3—N1—C1—O1−175.8 (5)C17—O4—C10—C6−173.7 (4)
C6—N1—C1—C2122.9 (4)C5—C6—C10—O37.5 (6)
C3—N1—C1—C24.0 (3)N1—C6—C10—O3−173.8 (4)
O1—C1—C2—C7−64.2 (7)C5—C6—C10—O4−170.2 (4)
N1—C1—C2—C7116.0 (4)N1—C6—C10—O48.4 (5)
O1—C1—C2—C3176.0 (6)C5—S1—C11—C13−61.7 (3)
N1—C1—C2—C3−3.8 (3)C5—S1—C11—C12−156.9 (3)
C1—N1—C3—C2−3.9 (3)C14—N2—C12—C11165.7 (6)
C6—N1—C3—C2−140.9 (3)C13—N2—C12—C1115.0 (4)
C1—N1—C3—C4120.6 (3)C13—C11—C12—N2−14.4 (4)
C6—N1—C3—C4−16.3 (4)S1—C11—C12—N2100.7 (4)
C7—C2—C3—N1−116.8 (4)C14—N2—C13—C11−164.9 (6)
C1—C2—C3—N13.7 (3)C12—N2—C13—C11−15.1 (4)
C7—C2—C3—C4136.5 (4)C12—C11—C13—N214.3 (4)
C1—C2—C3—C4−103.1 (4)S1—C11—C13—N2−93.9 (4)
N1—C3—C4—C9−98.4 (5)C15—N3—C14—N2172.4 (7)
C2—C3—C4—C9−0.1 (6)C15—N3—C14—S2−0.9 (7)
N1—C3—C4—C520.2 (4)C12—N2—C14—N321.4 (9)
C2—C3—C4—C5118.5 (4)C13—N2—C14—N3161.4 (5)
C9—C4—C5—C6104.1 (4)C12—N2—C14—S2−165.3 (4)
C3—C4—C5—C6−18.6 (4)C13—N2—C14—S2−25.3 (8)
C9—C4—C5—S1−71.2 (5)C16—S2—C14—N3−12.7 (5)
C3—C4—C5—S1166.1 (3)C16—S2—C14—N2173.4 (5)
C11—S1—C5—C6156.3 (3)C14—N3—C15—C1618.3 (10)
C11—S1—C5—C4−29.1 (4)N3—C15—C16—S2−26.1 (10)
C4—C5—C6—N19.5 (4)C14—S2—C16—C1521.0 (7)
S1—C5—C6—N1−175.3 (3)C18—O5—C17—O4−80.2 (6)
C4—C5—C6—C10−171.7 (4)C10—O4—C17—O5143.8 (4)
S1—C5—C6—C103.5 (5)C17—O5—C18—O6−0.7 (9)
C1—N1—C6—C5−108.0 (4)C17—O5—C18—C19−179.7 (5)
C3—N1—C6—C54.8 (4)O6—C18—C19—C21−21.0 (12)
C1—N1—C6—C1073.2 (5)O5—C18—C19—C21158.0 (9)
C3—N1—C6—C10−174.1 (3)O6—C18—C19—C20−148.0 (9)
C1—C2—C7—O2−50.0 (5)O5—C18—C19—C2031.0 (10)
C3—C2—C7—O251.5 (5)O6—C18—C19—C2298.0 (9)
C1—C2—C7—C8−172.6 (4)O5—C18—C19—C22−83.0 (8)
C3—C2—C7—C8−71.1 (5)
D—H···AD—HH···AD···AD—H···A
O2—H2A···N3i0.822.012.816 (6)169
C11—H11A···O2ii0.982.433.366 (6)160
  10 in total

1.  Syntheses and pharmacokinetic studies of prodrug esters for the development of oral carbapenem, L-084.

Authors:  Takeshi Isoda; Hideki Ushirogochi; Koichi Satoh; Tsuyoshi Takasaki; Itsuki Yamamura; Chisato Sato; Ado Mihira; Takao Abe; Satoshi Tamai; Shigeki Yamamoto; Toshio Kumagai; Yoshimitsu Nagao
Journal:  J Antibiot (Tokyo)       Date:  2006-04       Impact factor: 2.649

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  [Pharmacokinetics of tebipenem pivoxil, a novel oral carbapenem antibiotic, in experimental animals].

Authors:  Koji Kijima; Jun Morita; Katsuyoshi Suzuki; Makoto Aoki; Kazuhiko Kato; Hiroyuki Hayashi; Shigeki Shibasaki; Tohru Kurosawa
Journal:  Jpn J Antibiot       Date:  2009-06

4.  In vitro activity of tebipenem, a new oral carbapenem antibiotic, against penicillin-nonsusceptible Streptococcus pneumoniae.

Authors:  Reiko Kobayashi; Mami Konomi; Keiko Hasegawa; Miyuki Morozumi; Keisuke Sunakawa; Kimiko Ubukata
Journal:  Antimicrob Agents Chemother       Date:  2005-03       Impact factor: 5.191

5.  A practical and facile synthesis of azetidine derivatives for oral carbapenem, L-084.

Authors:  Takeshi Isoda; Itsuki Yamamura; Satoshi Tamai; Toshio Kumagai; Yoshimitsu Nagao
Journal:  Chem Pharm Bull (Tokyo)       Date:  2006-10       Impact factor: 1.645

6.  Intestinal absorption mechanism of tebipenem pivoxil, a novel oral carbapenem: involvement of human OATP family in apical membrane transport.

Authors:  Kazuhiko Kato; Yoshiyuki Shirasaka; Erika Kuraoka; Akihiro Kikuchi; Maki Iguchi; Hisashi Suzuki; Shigeki Shibasaki; Tohru Kurosawa; Ikumi Tamai
Journal:  Mol Pharm       Date:  2010-09-03       Impact factor: 4.939

Review 7.  Carbapenems: past, present, and future.

Authors:  Krisztina M Papp-Wallace; Andrea Endimiani; Magdalena A Taracila; Robert A Bonomo
Journal:  Antimicrob Agents Chemother       Date:  2011-08-22       Impact factor: 5.191

8.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

9.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17

10.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
  10 in total
  1 in total

Review 1.  Acyclic Twisted Amides.

Authors:  Guangrong Meng; Jin Zhang; Michal Szostak
Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

  1 in total

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