Literature DB >> 30224481

Phospho-dependent recruitment of the yeast NuA4 acetyltransferase complex by MRX at DNA breaks regulates RPA dynamics during resection.

Xue Cheng1, Olivier Jobin-Robitaille1, Pierre Billon1, Rémi Buisson1, Hengyao Niu2, Nicolas Lacoste1, Nebiyu Abshiru3,4, Valérie Côté1, Pierre Thibault3,4, Stephen J Kron5, Patrick Sung2, Christopher J Brandl6, Jean-Yves Masson1, Jacques Côté7.   

Abstract

The KAT5 (Tip60/Esa1) histone acetyltransferase is part of NuA4, a large multifunctional complex highly conserved from yeast to mammals that targets lysines on H4 and H2A (X/Z) tails for acetylation. It is essential for cell viability, being a key regulator of gene expression, cell proliferation, and stem cell renewal and an important factor for genome stability. The NuA4 complex is directly recruited near DNA double-strand breaks (DSBs) to facilitate repair, in part through local chromatin modification and interplay with 53BP1 during the DNA damage response. While NuA4 is detected early after appearance of the lesion, its precise mechanism of recruitment remains to be defined. Here, we report a stepwise recruitment of yeast NuA4 to DSBs first by a DNA damage-induced phosphorylation-dependent interaction with the Xrs2 subunit of the Mre11-Rad50-Xrs2 (MRX) complex bound to DNA ends. This is followed by a DNA resection-dependent spreading of NuA4 on each side of the break along with the ssDNA-binding replication protein A (RPA). Finally, we show that NuA4 can acetylate RPA and regulate the dynamics of its binding to DNA, hence targeting locally both histone and nonhistone proteins for lysine acetylation to coordinate repair.

Entities:  

Keywords:  DNA double-strand break; NuA4; RPA; chromatin; lysine acetylation

Mesh:

Substances:

Year:  2018        PMID: 30224481      PMCID: PMC6176631          DOI: 10.1073/pnas.1806513115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

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Authors:  Jessica A Downs; Jacques Côté
Journal:  Cell Cycle       Date:  2005-10-17       Impact factor: 4.534

2.  Eaf5/7/3 form a functionally independent NuA4 submodule linked to RNA polymerase II-coupled nucleosome recycling.

Authors:  Dorine Rossetto; Myriam Cramet; Alice Y Wang; Anne-Lise Steunou; Nicolas Lacoste; Julia M Schulze; Valérie Côté; Julie Monnet-Saksouk; Sandra Piquet; Amine Nourani; Michael S Kobor; Jacques Côté
Journal:  EMBO J       Date:  2014-05-19       Impact factor: 11.598

Review 3.  The chromatin response to DNA breaks: leaving a mark on genome integrity.

Authors:  Godelieve Smeenk; Haico van Attikum
Journal:  Annu Rev Biochem       Date:  2013-02-14       Impact factor: 23.643

4.  Integrated proteomic analysis of post-translational modifications by serial enrichment.

Authors:  Philipp Mertins; Jana W Qiao; Jinal Patel; Namrata D Udeshi; Karl R Clauser; D R Mani; Michael W Burgess; Michael A Gillette; Jacob D Jaffe; Steven A Carr
Journal:  Nat Methods       Date:  2013-06-09       Impact factor: 28.547

5.  MYST protein acetyltransferase activity requires active site lysine autoacetylation.

Authors:  Hua Yuan; Dorine Rossetto; Hestia Mellert; Weiwei Dang; Madhusudan Srinivasan; Jamel Johnson; Santosh Hodawadekar; Emily C Ding; Kaye Speicher; Nebiyu Abshiru; Rocco Perry; Jiang Wu; Chao Yang; Y George Zheng; David W Speicher; Pierre Thibault; Alain Verreault; F Bradley Johnson; Shelley L Berger; Rolf Sternglanz; Steven B McMahon; Jacques Côté; Ronen Marmorstein
Journal:  EMBO J       Date:  2011-10-21       Impact factor: 11.598

Review 6.  Mechanism and regulation of DNA end resection in eukaryotes.

Authors:  Lorraine S Symington
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-04-20       Impact factor: 8.250

7.  Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants.

Authors:  Andréanne Auger; Luc Galarneau; Mohammed Altaf; Amine Nourani; Yannick Doyon; Rhea T Utley; Dominique Cronier; Stéphane Allard; Jacques Côté
Journal:  Mol Cell Biol       Date:  2008-01-22       Impact factor: 4.272

8.  Recruitment of the NuA4 complex poises the PHO5 promoter for chromatin remodeling and activation.

Authors:  Amine Nourani; Rhea T Utley; Stéphane Allard; Jacques Côté
Journal:  EMBO J       Date:  2004-06-03       Impact factor: 11.598

Review 9.  Emerging common themes in regulation of PIKKs and PI3Ks.

Authors:  Harri Lempiäinen; Thanos D Halazonetis
Journal:  EMBO J       Date:  2009-09-24       Impact factor: 11.598

10.  DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1.

Authors:  Grzegorz Ira; Achille Pellicioli; Alitukiriza Balijja; Xuan Wang; Simona Fiorani; Walter Carotenuto; Giordano Liberi; Debra Bressan; Lihong Wan; Nancy M Hollingsworth; James E Haber; Marco Foiani
Journal:  Nature       Date:  2004-10-21       Impact factor: 49.962

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Authors:  Nikita Avvakumov; Marie-Eve Lalonde; Nader Alerasool; Charles Joly-Beauparlant; Karine Jacquet; Amel Mameri; Deepthi Sudarshan; Jean-Philippe Lambert; Justine Rousseau; Catherine Lachance; Eric Paquet; Lara Herrmann; Samarth Thonta Setty; Jeremy Loehr; Marcus Q Bernardini; Marjan Rouzbahman; Anne-Claude Gingras; Benoit Coulombe; Arnaud Droit; Mikko Taipale; Yannick Doyon; Jacques Côté
Journal:  Genes Dev       Date:  2022-06-16       Impact factor: 12.890

2.  Lysine acetylation regulates the activity of nuclear Pif1.

Authors:  Onyekachi E Ononye; Christopher W Sausen; Lata Balakrishnan; Matthew L Bochman
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

3.  Antagonistic relationship of NuA4 with the non-homologous end-joining machinery at DNA damage sites.

Authors:  Salar Ahmad; Valérie Côté; Xue Cheng; Gaëlle Bourriquen; Vasileia Sapountzi; Mohammed Altaf; Jacques Côté
Journal:  PLoS Genet       Date:  2021-09-20       Impact factor: 5.917

4.  Schizosaccharomyces pombe KAT5 contributes to resection and repair of a DNA double-strand break.

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Journal:  Genetics       Date:  2021-05-17       Impact factor: 4.562

5.  Accumulation of unacetylatable Snf2p at the INO1 promoter is detrimental to remodeler recycling supply for CUP1 induction.

Authors:  Michelle Esposito; Goldie Libby Sherr; Anthony Esposito; George Kaluski; Farris Ellington; Chang-Hui Shen
Journal:  PLoS One       Date:  2020-03-25       Impact factor: 3.240

6.  Yeast Bromodomain Factor 1 and Its Human Homolog TAF1 Play Conserved Roles in Promoting Homologous Recombination.

Authors:  Haoyang Peng; Simin Zhang; Yihan Peng; Shuangyi Zhu; Xin Zhao; Xiaocong Zhao; Shuangshuang Yang; Guangxue Liu; Yang Dong; Xiaoli Gan; Qing Li; Xinghua Zhang; Huadong Pei; Xuefeng Chen
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