Literature DB >> 3022240

A variable tandem repeat locus mapped to chromosome band 10q26 is amplified and rearranged in leukocyte DNAs of two cancer patients.

M Colb, T Yang-Feng, U Francke, B Mermer, D R Parkinson, T G Krontiris.   

Abstract

A highly polymorphic locus associated with the variable tandem repetition of a 35 bp consensus sequence was mapped to chromosome 10, band q26. Examination of leukocyte DNA from a cancer patient revealed the twenty-fold amplification of one allelic fragment of this locus, while the other allelic fragment demonstrated a normal copy number. In another patient, Southern blotting of leukocyte DNA detected the deletion of the 3'-flanking region from one tandem repeat allele. These results indicate that variable tandem repeats may mark highly unstable regions of DNA in the human genome which can be altered by changes more extensive than simple tandem repeat variation.

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Year:  1986        PMID: 3022240      PMCID: PMC311825          DOI: 10.1093/nar/14.20.7929

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Unique allelic restriction fragments of the human Ha-ras locus in leukocyte and tumour DNAs of cancer patients.

Authors:  T G Krontiris; N A DiMartino; M Colb; D R Parkinson
Journal:  Nature       Date:  1985 Jan 31-Feb 6       Impact factor: 49.962

3.  Complete nucleotide sequences of the T24 human bladder carcinoma oncogene and its normal homologue.

Authors:  D J Capon; E Y Chen; A D Levinson; P H Seeburg; D V Goeddel
Journal:  Nature       Date:  1983-03-03       Impact factor: 49.962

4.  Quantitative isolation of DNA restriction fragments from low-melting agarose by Elutip-d affinity chromatography.

Authors:  J J Schmitt; B N Cohen
Journal:  Anal Biochem       Date:  1983-09       Impact factor: 3.365

5.  Molecular basis of length polymorphism in the human zeta-globin gene complex.

Authors:  S E Goodbourn; D R Higgs; J B Clegg; D J Weatherall
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

6.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Localization of single copy DNA sequences of G-banded human chromosomes by in situ hybridization.

Authors:  M E Harper; G F Saunders
Journal:  Chromosoma       Date:  1981       Impact factor: 4.316

8.  Human restriction fragment length polymorphisms and cancer risk assessment.

Authors:  T G Krontiris; N A DiMartino; M Colb; H D Mitcheson; D R Parkinson
Journal:  J Cell Biochem       Date:  1986       Impact factor: 4.429

9.  The isolation and characterization of linked delta- and beta-globin genes from a cloned library of human DNA.

Authors:  R M Lawn; E F Fritsch; R C Parker; G Blake; T Maniatis
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

10.  Nucleotide sequence of the rightward operator of phage lambda.

Authors:  T Maniatis; A Jeffrey; D G Kleid
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

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  8 in total

1.  A clinically homogeneous group of families with facioscapulohumeral (Landouzy-Déjérine) muscular dystrophy: linkage analysis of six autosomes.

Authors:  S J Jacobsen; E S Diala; B V Dorsey; M B Rising; R Graveline; K Falls; P Schultz; C Hogan; K Rediker; C D'Amico
Journal:  Am J Hum Genet       Date:  1990-09       Impact factor: 11.025

2.  The human minisatellite consensus at breakpoints of oncogene translocations.

Authors:  A M Krowczynska; R A Rudders; T G Krontiris
Journal:  Nucleic Acids Res       Date:  1990-03-11       Impact factor: 16.971

3.  Members of the rel/NF-kappa B family of transcriptional regulatory proteins bind the HRAS1 minisatellite DNA sequence.

Authors:  W L Trepicchio; T G Krontiris
Journal:  Nucleic Acids Res       Date:  1992-05-25       Impact factor: 16.971

4.  Two-dimensional DNA fingerprinting of human individuals.

Authors:  A G Uitterlinden; P E Slagboom; D L Knook; J Vijg
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

5.  Probe walking: development of novel probes for DNA fingerprinting.

Authors:  K Washio; S Misawa; S Ueda
Journal:  Hum Genet       Date:  1989-10       Impact factor: 4.132

6.  A family of short, interspersed repeats is associated with tandemly repetitive DNA in the human genome.

Authors:  B Mermer; M Colb; T G Krontiris
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

Review 7.  DNA polymorphism and the study of disease associations.

Authors:  D N Cooper; J F Clayton
Journal:  Hum Genet       Date:  1988-04       Impact factor: 4.132

8.  c-Ha-ras-1 alleles in bladder cancer, Wilms' tumour and malignant melanoma.

Authors:  N K Hayward; R Keegan; D J Nancarrow; M H Little; P J Smith; R A Gardiner; G J Seymour; C Kidson; M F Lavin
Journal:  Hum Genet       Date:  1988-02       Impact factor: 4.132

  8 in total

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