Literature DB >> 30210668

A comprehensive investigation using meta-analysis and bioinformatics on miR-34a-5p expression and its potential role in head and neck squamous cell carcinoma.

Jixi Li1,2, Kang Liu1,2, Tingting Zhang1,2, Zhendong Yang1,2, Rensheng Wang1,2, Gang Chen3, Min Kang1,2.   

Abstract

HNSCC is the sixth most common cancer worldwide and is characterized as an aggressive, malignant tumor. MiR-34a-5p (miR-34a) expression has been strongly linked to HNSCC development. However, the exact target gene of miRNA-34a-as well as its biological and mechanistic pathways-are unclear. It is critical that the clinical value of HNSCC receive further study. We conducted a continuous variable, meta-analysis from data found in the cancer literature as well as that provided by the Cancer Genome Atlas (TCGA) to estimate miR-34a expression in HNSCC. Next, TCGA database, microarray, and MiRWalk were all used to predict the target gene of miR-34a in HNSCC. Then, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were used to explore the underlying molecular mechanism of miR-34a in HNSCC. Finally, we used Spearman's analysis and survival curves to identify the roles of related target genes involved in significant pathways during the development of HNSCC. Expression levels of miR-34a in HNSCC were significant lower than those in normal tissues (P<0.05) and summary receiver operating characteristic (sROC) was 0.72. The collective results obtained from KEGG and GO indicated that miR-34a may be involved in the development of HNSCC via known cancer pathways, including the p53 and/or PI3K-Akt signalling pathways. Our results suggested miR-34a has potential use as a novel, non-invasive and highly sensitive biomarker for diagnostic in HNSCC. Finally, it likely plays an essential role in the deterioration and ultimate tumorigenesis of HNSCC through determined cancer pathways.

Entities:  

Keywords:  HNSCC; TCGA; bioinformatics; meta-analysis; miR-34a-5p

Year:  2018        PMID: 30210668      PMCID: PMC6129509     

Source DB:  PubMed          Journal:  Am J Transl Res            Impact factor:   4.060


  47 in total

1.  Head and Neck Cancer.

Authors:  Peter F Svider; Michael A Blasco; S Naweed Raza; Mahdi Shkoukani; Ammar Sukari; George H Yoo; Adam J Folbe; Ho-Sheng Lin; Andrew M Fribley
Journal:  Otolaryngol Head Neck Surg       Date:  2016-11-14       Impact factor: 3.497

2.  Frequent downregulation of miR-34 family in human ovarian cancers.

Authors:  David C Corney; Chang-Il Hwang; Andres Matoso; Markus Vogt; Andrea Flesken-Nikitin; Andrew K Godwin; Aparna A Kamat; Anil K Sood; Lora H Ellenson; Heiko Hermeking; Alexander Yu Nikitin
Journal:  Clin Cancer Res       Date:  2010-02-09       Impact factor: 12.531

Review 3.  MicroRNAs: potential biomarkers for cancer diagnosis, prognosis and targets for therapy.

Authors:  William C S Cho
Journal:  Int J Biochem Cell Biol       Date:  2009-12-22       Impact factor: 5.085

4.  Down Regulation of miR-34a and miR-143 May Indirectly Inhibit p53 in Oral Squamous Cell Carcinoma: a Pilot Study.

Authors:  Mayakannan Manikandan; Arunagiri Kuha Deva Magendhra Rao; Ganesan Arunkumar; Kottayasamy Seenivasagam Rajkumar; Ramamurthy Rajaraman; Arasambattu Kannan Munirajan
Journal:  Asian Pac J Cancer Prev       Date:  2015

5.  miR-34a as a prognostic marker of relapse in surgically resected non-small-cell lung cancer.

Authors:  Elena Gallardo; Alfons Navarro; Nuria Viñolas; Ramon M Marrades; Tania Diaz; Bernat Gel; Angels Quera; Eva Bandres; Jesus Garcia-Foncillas; Jose Ramirez; Mariano Monzo
Journal:  Carcinogenesis       Date:  2009-09-07       Impact factor: 4.944

6.  Dysregulation of microRNA-34a expression in colorectal cancer inhibits the phosphorylation of FAK via VEGF.

Authors:  Danhua Zhang; Jianping Zhou; Ming Dong
Journal:  Dig Dis Sci       Date:  2013-12-27       Impact factor: 3.199

7.  MicroRNA-34a modulates MDM4 expression via a target site in the open reading frame.

Authors:  Pooja Mandke; Nicholas Wyatt; Jillian Fraser; Benjamin Bates; Steven J Berberich; Michael P Markey
Journal:  PLoS One       Date:  2012-08-01       Impact factor: 3.240

8.  The microRNA miR-34a inhibits prostate cancer stem cells and metastasis by directly repressing CD44.

Authors:  Can Liu; Kevin Kelnar; Bigang Liu; Xin Chen; Tammy Calhoun-Davis; Hangwen Li; Lubna Patrawala; Hong Yan; Collene Jeter; Sofia Honorio; Jason F Wiggins; Andreas G Bader; Randy Fagin; David Brown; Dean G Tang
Journal:  Nat Med       Date:  2011-01-16       Impact factor: 53.440

9.  Dysregulation of microRNA-34a expression in head and neck squamous cell carcinoma promotes tumor growth and tumor angiogenesis.

Authors:  Bhavna Kumar; Arti Yadav; James Lang; Theodoros N Teknos; Pawan Kumar
Journal:  PLoS One       Date:  2012-05-22       Impact factor: 3.240

10.  Mutational landscape and significance across 12 major cancer types.

Authors:  Cyriac Kandoth; Michael D McLellan; Fabio Vandin; Kai Ye; Beifang Niu; Charles Lu; Mingchao Xie; Qunyuan Zhang; Joshua F McMichael; Matthew A Wyczalkowski; Mark D M Leiserson; Christopher A Miller; John S Welch; Matthew J Walter; Michael C Wendl; Timothy J Ley; Richard K Wilson; Benjamin J Raphael; Li Ding
Journal:  Nature       Date:  2013-10-17       Impact factor: 49.962

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  3 in total

1.  Gene signatures of m5C regulators may predict prognoses of patients with head and neck squamous cell carcinoma.

Authors:  Miaomiao Xue; Qingmiao Shi; Lian Zheng; Qingbin Li; Liya Yang; Yuanyuan Zhang
Journal:  Am J Transl Res       Date:  2020-10-15       Impact factor: 4.060

2.  The clinical value of miRNA-21 in cervical cancer: A comprehensive investigation based on microarray datasets.

Authors:  Zhi-Min Deng; Gan-Hong Chen; Fang-Fang Dai; Shi-Yi Liu; Dong-Yong Yang; An-Yu Bao; Yan-Xiang Cheng
Journal:  PLoS One       Date:  2022-04-29       Impact factor: 3.240

Review 3.  Promising Biomarkers in Head and Neck Cancer: The Most Clinically Important miRNAs.

Authors:  Arsinoe C Thomaidou; Panagiota Batsaki; Maria Adamaki; Maria Goulielmaki; Constantin N Baxevanis; Vassilis Zoumpourlis; Sotirios P Fortis
Journal:  Int J Mol Sci       Date:  2022-07-26       Impact factor: 6.208

  3 in total

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