Literature DB >> 3020502

Expression strategies of the yeast retrotransposon Ty: a short sequence directs ribosomal frameshifting.

W Wilson, M H Malim, J Mellor, A J Kingsman, S M Kingsman.   

Abstract

The Ty element of yeast is a member of a class of eukaryotic transposons which bear a striking resemblance to retroviral proviruses in their structure and expression strategies (1,2). A direct comparison can be drawn between the production of a fusion protein encoded by Ty, resulting from a frameshift event which fuses two out-of-phase open reading frames TYA and TYB, and the production of Pr180gag-pol in a retrovirus such as Rous Sarcoma Virus (RSV) (3,4). We present data which shows, definitively, that RNA splicing is not responsible for the frameshift in Ty. By in vitro mutation of a class I element, Ty1-15, we demonstrate that 31 nucleotides contained within the region where the TYA and TYB open reading frames overlap direct the frameshift. Within this short sequence there is a region of homology with a class II element which we show is also able to frameshift.

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Year:  1986        PMID: 3020502      PMCID: PMC311713          DOI: 10.1093/nar/14.17.7001

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  Reverse transcriptase activity and Ty RNA are associated with virus-like particles in yeast.

Authors:  J Mellor; M H Malim; K Gull; M F Tuite; S McCready; T Dibbayawan; S M Kingsman; A J Kingsman
Journal:  Nature       Date:  1985 Dec 12-18       Impact factor: 49.962

2.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

3.  Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.

Authors:  J Clare; P Farabaugh
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

6.  Expression of a beta-galactosidase gene containing the ribosomal protein 51 intron is sensitive to the rna2 mutation of yeast.

Authors:  J L Teem; M Rosbash
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

7.  Sequence variation in dispersed repetitive sequences in Saccharomyces cerevisiae.

Authors:  A J Kingsman; R L Gimlich; L Clarke; A C Chinault; J Carbon
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

8.  Overlap hybridization screening: isolation and characterization of overlapping DNA fragments surrounding the leu2 gene on yeast chromosome III.

Authors:  A C Chinault; J Carbon
Journal:  Gene       Date:  1979-02       Impact factor: 3.688

9.  Efficient synthesis of enzymatically active calf chymosin in Saccharomyces cerevisiae.

Authors:  J Mellor; M J Dobson; N A Roberts; M F Tuite; J S Emtage; S White; P A Lowe; T Patel; A J Kingsman; S M Kingsman
Journal:  Gene       Date:  1983-09       Impact factor: 3.688

10.  Murine leukemia virus protease is encoded by the gag-pol gene and is synthesized through suppression of an amber termination codon.

Authors:  Y Yoshinaka; I Katoh; T D Copeland; S Oroszlan
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

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  32 in total

1.  Frameshift signal transplantation and the unambiguous analysis of mutations in the yeast retrotransposon Ty1 Gag-Pol overlap region.

Authors:  J F Lawler; G V Merkulov; J D Boeke
Journal:  J Virol       Date:  2001-08       Impact factor: 5.103

2.  DNA damage activates transcription and transposition of yeast Ty retrotransposons.

Authors:  V A Bradshaw; K McEntee
Journal:  Mol Gen Genet       Date:  1989-09

Review 3.  Eucaryotic codes.

Authors:  F Caron
Journal:  Experientia       Date:  1990-12-01

4.  The production of hybrid Ty:IFN virus-like particles in yeast.

Authors:  M H Malim; S E Adams; K Gull; A J Kingsman; S M Kingsman
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

5.  Glycine tRNA mutants with normal anticodon loop size cause -1 frameshifting.

Authors:  D J O'Mahony; B H Mims; S Thompson; E J Murgola; J F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

6.  Evidence that less-than-full-length pol gene products are functional in hepadnavirus DNA synthesis.

Authors:  T T Wu; L D Condreay; L Coates; C Aldrich; W Mason
Journal:  J Virol       Date:  1991-05       Impact factor: 5.103

7.  Proteolytic processing of pol-TYB proteins from the yeast retrotransposon Ty1.

Authors:  D J Garfinkel; A M Hedge; S D Youngren; T D Copeland
Journal:  J Virol       Date:  1991-09       Impact factor: 5.103

8.  Expression of functional hepatitis B virus polymerase in yeast reveals it to be the sole viral protein required for correct initiation of reverse transcription.

Authors:  J E Tavis; D Ganem
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

Review 9.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

10.  Host genes that influence transposition in yeast: the abundance of a rare tRNA regulates Ty1 transposition frequency.

Authors:  H Xu; J D Boeke
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

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