Anastasia Psarra1, Maroula G Kokotou1, Gerasimia Galiatsatou1, Varnavas D Mouchlis2, Edward A Dennis2, George Kokotos1. 1. Department of Chemistry, National and Kapodistrian University of Athens, Panepistimiopolis, Athens 15771, Greece. 2. Department of Pharmacology and Department of Chemistry and Biochemistry, School of Medicine, University of California San Diego, La Jolla, California 92093-0601, United States.
Abstract
Cytosolic phospholipase A2 (GIVA cPLA2) has attracted great interest as a medicinal target because it initiates the eicosanoid cascade and is involved in a number of inflammatory diseases. As a consequence, the development of potent synthetic inhibitors is of great importance. We have developed highly potent 2-oxoester inhibitors of GIVA cPLA2 presenting XI(50) values between 0.000019 and 0.000066. We demonstrate that the 2-oxoester functionality is essential for in vitro inhibitory activity, making these inhibitors useful research reagents. However, their high reactivity results in rapid degradation of the inhibitors in human plasma, limiting their pharmaceutical utility without further modification.
Cytosolic phospholipase A2 (Gn class="Disease">IVAcPLA2) has attracted great interest as a medicinal target because it initiates the eicosanoid cascade and is involved in a number of inflammatory diseases. As a consequence, the development of potent synthetic inhibitors is of great importance. We have developed highly potent 2-oxoester inhibitors of GIVAcPLA2 presenting XI(50) values between 0.000019 and 0.000066. We demonstrate that the 2-oxoester functionality is essential for in vitro inhibitory activity, making these inhibitors useful research reagents. However, their high reactivity results in rapid degradation of the inhibitors in human plasma, limiting their pharmaceutical utility without further modification.
Phospholipases A2 (PLA2s) have attracted
great interest as medicinal tn class="Chemical">argets for more than 20 years because
they are involved in a number of inflammatory diseases.[1] Among this superfamily of enzymes,[2] cytosolic PLA2 (GIVAcPLA2) stands out because it exhibits a marked preference for the hydrolysis
of arachidonic acid at the sn-2 position of phospholipid substrates
releasing arachidonic acid and initiating the eicosanoid cascade.[3] Both the physiological function and the role
of cytosolic PLA2 have been recently summarized by Leslie.[4] Due to the involvement of PLA2s in
various inflammatory diseases, many synthetic inhibitors have been
developed in both academia and pharmaceutical companies.[1] Two recent review articles discuss the classes
of PLA2 inhibitors and highlight the in vitro activities
and selectivity and the in vivo studies in animal models.[5,6]
Most recently, a randomized double-blind placebo-controlled
dose-escalation
first-in-man study to assess the safety and efficacy of a topical
cytosolic n class="Gene">PLA2 inhibitor AVX001 (1, Figure ) in patients with
mild-to-moderate plaque psoriasis has demonstrated that treatment
with AVX001 is well tolerated in doses up to 5%.[7] Pharmacological inhibition of GIVAcPLA2 by
inhibitor 2 (Figure ) blocked Streptococcus pneumoniae-induced polymorphonuclear cells transepithelial migration in vitro,
suggesting that this enzyme plays a crucial role in eliciting pulmonary
inflammation during pneumococcal infection.[8] The daily administration of the indole-based inhibitor ASB14780
(3, Figure ), which had been developed by Tomoo and colleagues,[9] markedly ameliorated liver injury and hepatic fibrosis
following 6 weeks of treatment with CCl4, indicating that
a GIVAcPLA2 inhibitor could be useful for the treatment
of nonalcoholic fatty liver diseases, including fatty liver and hepatic
fibrosis.[10] A few years ago, we presented
new thiazolyl ketones as inhibitors of GIVAcPLA2 and demonstrated
the in vivo anti-inflammatory activity of inhibitor GK470 (4, Figure ) in a collagen-induced
arthritis model.[11] The anti-angiogenic
effects of this inhibitor (now named as AVX235) in a patient-derived
triple-negative basal-like breast cancer model was evaluated and significant
tumor growth inhibition was observed after 8 days of treatment.[12] Most recent findings showed that blockage of
GIVAcPLA2 by either inhibitor 2 or pyrrophenone
(5, Figure ) sensitized aggressive breast cancer to doxorubicin by suppressing
ERK and mTOR kinases.[13]
Figure 1
Structures of known GIVA
cPLA2 inhibitors.
Structures of known GIVAn class="Gene">cPLA2 inhibitors.
All of the above-described recent applications of synthetic
GIVAn class="Gene">cPLA2 inhibitors highlight the importance of identifying
new highly potent inhibitors to regulate the activity of GIVAcPLA2. Last year, we reported the development of a novel class
of GIVAcPLA2 inhibitors, namely, 2-oxoesters.[14] 2-Oxoester GK452 (6, Figure ), containing a biphenyl system
and a free carboxyl group, led to highly potent and selective GIVAcPLA2 in vitro inhibition (XI(50) 0.000078). The aim of the present work was to further understand
the characteristics of 2-oxoesters and explore the possibility of
producing more potent GIVAcPLA2 inhibitors.
Results and Discussion
Synthesis
of Inhibitors
To extend the structure–activity
relationship studies on 2-oxoester inhibitors, we (a) shortened the
length between the actn class="Disease">ivated carbonyl group and the biphenyl functionality,
(b) replaced the biphenyl system with a para-alkoxy-substituted
phenyl group, and (c) explored the importance of the activated carbonyl
group. To this end, a variety of 2-substituted carboxylic acids, required
for the target compounds, were synthesized as described in Scheme .
Scheme 1
The synthesis of carboxylic
acids 13, 15, and 16, ben class="Chemical">aring
a 4-butoxy-phenyl group, started with
the Wadsworth–Horner–Emmons olefination reaction of
aldehydes 7a, 7b(15) with triethyl phosphonocrotonate to give the corresponding unsaturated
esters 8a,b, which were hydrogenated to compounds 9a,b. The reduction of 9a led to alcohol 10, which subsequently provided cyanohydrin 11. Subsequent treatment with HCl in methanol gave 2-hydroxy methyl
ester 12, which was then saponified to 2-hydroxy acid 13 by treatment with aqueous NaOH. Treatment of 12 with the fluorinating agent diethylaminosulfur trifluoride (DAST)[16] resulted in 2-fluoro methyl ester 14, consequently providing 2-fluoro carboxylic acid 15 after saponification. The carboxylic acid 16 was also
obtained by alkaline hydrolysis of 9b. The synthesis
of 2-hydroxy acid 20 was accomplished by similar procedures
starting from aldehyde 17,[17] as depicted in Scheme .
Scheme 2
The key step in the synthesis of 2-oxoesters
was the reaction betweenn class="Chemical">cesium salt of 2-hydroxy carboxylic acids with appropriate tert-butyl bromoalkanoate 22a,b(14) (Scheme ). 2-Hydroxy esters 23a–d, obtained from 2-hydroxy carboxylic acids 13, 20, and the previously synthesized 21,[14] were then oxidized to the corresponding 2-oxoesters 24a–d using the Dess–Martin periodinane
reagent. Cleavage of tert-butyl protecting group
led to the target compounds 25a–d (Scheme ).
Scheme 3
Likewise, reaction
of 2-fluoro carboxylic acid 15 and
acid 16 with n class="Chemical">tert-butyl bromopentanoate
(22b) resulted in derivatives 26a,b, and
subsequently, after the removal of tert-butyl group,
to the desired products 27a,b (Scheme ). Finally, the synthesis of 2-oxoacid 29 was accomplished as shown in Scheme by saponification of the corresponding 2-oxoester 28 under mild conditions.
Scheme 4
Scheme 5
In Vitro Inhibition of
GIVA cPLA2, GVIA iPLA2, and GV sPLA2
All of the new compounds
synthesized were tested for in vitro inhibition of human Gn class="Disease">IVA cPLA2, calcium-independent phospholipase A2 (GVIA iPLA2), and secreted phospholipase A2 (GV sPLA2) using previously described mixed micelle-based assays.[18−20] The inhibition results are presented in Table , either as percent inhibition or as XI(50) values. At first, the percent of inhibition
for each PLA2 enzyme at a high mole fraction (0.091) of
each inhibitor was determined. Then, the XI(50) values were measured for compounds that displayed more than
95% inhibition. The XI(50) is the mole
fraction of the inhibitor in the total substrate interface required
to inhibit the enzyme by 50%.
Table 1
In Vitro Inhibitory
Potency and Selectivity
of 2-Oxoesters
Calculated with ChemDraw.
% Inhibition at 0.091 mol fraction
of each inhibitor.
Calculated with ChemDraw.% Inhibition at 0.091 mol fraction
of each inhibitor.Because
it is an important property of GIVAn class="Gene">cPLA2 inhibitors,
the Clog P values for all the compounds tested,
calculated by ChemDraw, are also included in Table . The Clog P value
is a measure of hydrophobicity and represents the calculated partition
coefficient in octanol/water on a logarithmic scale.
Inhibitor 6 (GK452) (XI(50) 0.000078)[14] is included in Table for compn class="Chemical">arison purposes.
When the distance between the oxoester functionality and the biphenyl
system was decreased from four to two carbon atoms (compound 25c (GK482) and compound 25d (GK483)), the inhibitory
potency against GIVAcPLA2 considerably decreased. This
decrease was 1 order of magnitude in the case of a four-carbon linker
(compound 25cXI(50) 0.00041),
further decreasing (2 orders of magnitude) when the linker was further
shortened (25dXI(50) 0.0012).
These results are in accordance with our previous results[14] and confirm that the optimum distance between
the free carboxyl group and the oxoester functionality corresponds
to four carbon atoms. In addition, compound 25c lost
the selectivity because the inhibition of GVIA iPLA2 was
observed (XI(50) 0.0030). Thus, the four-carbon
linker was maintained for all the other derivatives. The optimum length
of the linker may be correlated with stereochemical reasons, rather
than hydrophobicity.
Interestingly, when one ring of the biphenyl
system was replaced
by a para-n class="Chemical">hexyloxy group, an increase in the inhibitor
potency against GIVAcPLA2 was observed. Compound 25b (GK484) is the most potent inhibitor of GIVAcPLA2 ever reported with a XI(50) value
of 0.000019, 4 times more potent than 6. However, the
replacement of the phenyl ring by the hexyloxy group resulted in an
increase in the Clog P value (from 4.70 for 6 to 5.37 for 25b). Thus, we shortened the hexyloxy
chain to butyloxy one. Compound 25a (GK504) (XI(50) 0.000066) is 3 times less potent than 25b, but still slightly more potent than 6. In
addition, its Clog P value (4.31) is lower
than 5, which is favorable because Lipinski’s “rule
of 5” predicts that poor absorption or permeation is more likely
when CLog P is greater than 5.[21] Neither 25b nor 25a presented significant inhibition of GVIA iPLA2 (86 and
77%, respectively, at a high mole fraction 0.091). In our experience,
compounds that show inhibition of PLA2 less than 90% at
the highest concentration tested (which corresponds to about 50 μM
inhibitor) always exhibit XI(50) values
greater than 0.01.[11,23] The GIVAcPLA2 inhibitor 25b with a XI(50) 0.000019 is
the most potent inhibitor of GIVAcPLA2 ever reported and
is at least 500-fold selective over GVIA iPLA2.
To
confirm the importance of the oxoester functionality, we removed
the actn class="Disease">ivated carbonyl group. Compound 27a (GK505) abolished
the inhibitory potency against GIVAcPLA2. Because the
only structural difference between 27a and 25a is the lack of the carbonyl group, a comparison of the inhibitory
potencies of 25a and 27a makes it clear
that the carbonyl group of the oxoester functionality is essential
for GIVAcPLA2 inhibition. To explore if an electron-withdrawing
group at position 2 could contribute to the inhibitory potency, the
fluoro derivative 27b (GK506) was studied. However, again,
no inhibition of GIVAcPLA2 was observed. Finally, 2-oxoacid 29 (GK511) was evaluated in vitro and only a very weak inhibition
of GIVAcPLA2 was recorded (55% at a high mole fraction
0.091). Because this 2-oxoacid is a fragment of 2-oxoester 25a, it is clear that the oxoester functionality is absolutely necessary
for the inhibition.
Plasma Stability Studies
Determination
of the stability
of new chemical entities in plasma is important, as compounds (with
the exception of pro-drugs), which rapidly degrade in plasma, generally
show poor in vivo performance.[22] The stability
of compounds 25a, 25b, and 27a in n class="Species">human plasma was studied in a time-dependent manner. Our aim
was to understand the difference between the two highly potent 2-oxoesters
GIVAcPLA2 inhibitors 25a and 25b in comparison to compound 27a lacking the activated
carbonyl group. A liquid chromatography-high resolution mass spectrometry
(LC-HRMS) method was developed to measure the inhibitor levels in
plasma. All of the HRMS spectra were obtained in electrospray ionization
(ESI) negative ion mode. The molecular ion of inhibitor 25b (GK484) was recorded at m/z 405.2253
(Figure A), whereas
in the MS/MS spectrum (Figure B), the most intense signal corresponds to the loss of C5H8O2 (−100.0524), indicating
the fragmentation of the ester bond. The HRMS spectra of inhibitors 25a and 27a are shown in the Supporting Information. In all cases of 2-oxoester inhibitors,
the fragmentation of the ester bond was observed. Plasma samples incubated
with each inhibitor were taken at 0, 15, 30, and 60 min and the molecular
ion of each inhibitor was used to estimate the inhibitor level. The
stability results are presented in Figure C as percent parent compound remaining at
each time point. Inhibitors 25a (GK504) and 25b (GK484), containing the 2-oxo group, are not detectable in the plasma
samples after 30 min, in contrast to 27a (GK505), whose
percentage remains close to 100% after 1 h. Apparently, the activated
carbonyl group of the 2-oxoester functionality of inhibitors 25a and 25b increases the chemical reactivity
of the ester bond toward hydrolysis in comparison to the less active
simple ester bond of inhibitor 27a. These results indicate
that the activated carbonyl group, which is essential for the enzyme
inhibition, makes the compounds susceptible to rapid degradation in
human plasma. A compound like 27a, lacking the activated
carbonyl group, is rather stable in plasma, however lacking the inhibitory
properties.
Figure 2
Precursor ion (A) and MS/MS HRMS spectrum (B) of inhibitor GK484.
Time-dependent degradation of inhibitors GK484, GK504, and GK505 in
human plasma (C).
Precursor ion (A) and MS/MS HRMS spectrum (B) of inhibitor GK484.
Time-dependent degradation of inhibitors n class="Chemical">GK484, GK504, and GK505 in
human plasma (C).
Conclusions
In
conclusion, a number of new 2-oxoesters and analogues were synthesized.
n class="Chemical">GK484 is the most potent inhibitor of GIVAcPLA2 ever reported
with a XI(50) value of 0.000019. The study
of the in vitro inhibitory activity highlighted the importance of
the 2-oxoester group for the inhibitory potency against GIVAcPLA2. The stability studies of 2-oxoesters in human plasma indicate
that a fine-tuning between the reactivity of the carbonyl group and
its stability will be needed in order for 2-oxoesters to be used in
vivo as pharmacological agents.
Experimental Section
General
Merck Silica Gel 60254 n class="Chemical">aluminum plates and
Silica Gel 60 (70–230 or 230–400 mesh) were used for
thin-layer chromatography and chromatographic purification of products,
respectively. For visualizing spots, UV light and/or phosphomolybdic
acid was employed. Melting points were estimated by a Büchi
530 apparatus and uncorrected. 1H, 13C, and 19F NMR spectra were recorded on Varian Mercury at 200, 50,
and 188 MHz, respectively. CDCl3 was used as the solvent.
Chemical shifts are given in ppm and coupling constants (J) in Hz. Peak multiplicities are typified as follows: s, singlet;
d, doublet; dd, doublet of doublets; t, triplet; q, quartet; qt, quintet;
and m, multiplet. Dichloromethane was dried by standard procedures
and stored over molecular sieves. No further purification of other
solvents and chemicals was needed. The HRMS spectra were recorded
on a Bruker Maxis Impact QTOF Spectrometer.
Synthesis
Compound 7a was commercially
available, and compounds 7b,[15]17,[17] and 21(14) have been described elsewhere and their
analytical data are in accordance with literature.
General Procedure for Synthesis
of Unsaturated Esters 8a,b
To a flame-dried,
round-bottomed flask containing
powdered molecular sieves (1 g), LiOH·n class="Chemical">H2O (1.5 mmol,
36 mg) and a solution of aldehyde 7a,b (1 mmol) in dry
THF (10 mL) were added under Ar atmosphere. Triethyl 4-phosphonocrotonate
(1.5 mmol, 375 mg) was added and the mixture was left under reflux
overnight. The reaction mixture was filtered through celite and the
solvent was evaporated under reduced pressure. The products were obtained
after trituration with MeOH.
To a solution of
unsaturated esters 8a,b (1 mmol) inn class="Chemical">EtOH (10 mL), 10%
Pd/C was added and the mixture stirred overnight under H2 atmosphere. The reaction mixture was filtered through celite and
concentrated in vacuo to isolate the saturated product 9a,b.
A solution
of 9a (1 mmol, 0.27 g) in anhydrous Et2O (10
mL) under n class="Chemical">Ar was cooled at 0 °C. DIBALH (1.2 mmol, 1.2 mL) was
added dropwise and the mixture was left at room temperature for 30
min. The reaction was quenched by adding ice at 0 °C and left
to stir for 30 min. The mixture was filtered through celite and concentrated
under reduced pressure. The residue was purified by column chromatography,
using EtOAc/petroleum ether (bp 40–60 °C) 3:7 as eluent.
Yield 90%; colorless oil; 1H NMR (200 MHz, CDCl3): δ 7.07 (d, J = 8.5 Hz, 2H, arom), 6.81
(d, J = 8.6 Hz, 2H, arom), 3.93 (t, J = 6.5 Hz, 2H, CH2O), 3.60 (t, J = 6.5
Hz, 2H, CH2OH), 2.50 (t, J = 6.4 Hz, 2H, PhCH2), 2.08 (brs, 1H, OH), 1.86–1.30
(m, 10H), 0.97 (t, J = 7.3 Hz, 3H, CH3); 13C NMR (50 MHz, CDCl3): δ 157.4,
134.7, 129.4, 114.5, 67.9, 63.0, 35.2, 32.8, 31.8, 31.6, 25.6, 19.5,
14.1; Anal. Calcd for C15H24O2: C,
76.23; H, 10.24; found: C, 76.09; H, 10.32.
6-(4-Butoxyphenyl)-2-hydroxyhexanenitrile
(11)
To a stirring solution of alcohol 10 (1 mmol, 0.24
g) in dry n class="Chemical">CH2Cl2 (10 mL), iodobenzene diacetate
(1.2 mmol, 0.39 g) and a catalytic amount of TEMPO (10%, 0.024 g)
were added and the reaction mixture was left stirring at room temperature
for 1 h. The reaction mixture was washed consecutively with 10% aqueous
Na2S2O3 (10 mL), 10% aqueous NaHCO3 (10 mL), and brine (10 mL), dried over Na2SO4, and concentrated in vacuo. The aldehyde was then dissolved
in CH2Cl2 (1.5 mL) and 4 N aqueous NaHSO3 (2 mmol, 0.5 mL) and the mixture was left stirring for 30
min at room temperature. The organic solvent was removed under reduced
pressure and H2O (1.5 mL) was added. The mixture was cooled
down to 0 °C and 4 N aqueous KCN (0.5 mL) was added dropwise
within 2 h under vigorous stirring, followed by stirring overnight
at room temperature. Then, H2O (10 mL) was added and extracted
with CH2Cl2 (3 × 10 mL). The combined organic
layers were washed with brine, dried over Na2SO4, and concentrated under reduced pressure. The residue was purified
by column chromatography with EtOAc/petroleum ether (bp 40–60
°C) 3:7 as eluent. Yield 71%; colorless oil; 1H NMR
(200 MHz, CDCl3): δ 7.08 (d, J =
8.3 Hz, 2H, arom), 6.83 (d, J = 8.3 Hz, 2H, arom),
4.53–4.38 (m, 1H, CH), 3.95 (t, J = 6.4 Hz,
2H, CH2O), 2.58 (t, J = 7.1 Hz, 2H, PhCH2), 1.93–1.38 (m, 10H, 5 × CH2), 0.98
(t, J = 7.3 Hz, 3H, CH3); 13C NMR (50 MHz, CDCl3): δ 157.5, 134.2, 129.5, 120.4,
114.7, 68.0, 61.4, 35.3, 35.0, 31.6, 31.3, 24.4, 19.5, 14.2; MS (ESI) m/z (%): 279 ([M + NH4]+, 100); Anal. Calcd for C16H23NO2: C, 73.53; H, 8.87; N, 5.36; found: C, 73.32; H, 9.03; N,
5.18.
To a stirring solution of aldehyde 17 (1.0 mmol) in n class="Chemical">CH2Cl2 (1.5 mL), an aqueous
solution of NaHSO3 6 M (0.25 mL, 1.5 mmol) was added and
the mixture was left stirring for 30 min at room temperature. The
organic solvent was evaporated under reduced pressure and H2O (5 mL) was added. The mixture was cooled down to 0 °C and
an aqueous solution of KCN 6 M (0.25 mL, 1.5 mmol) was added dropwise
under vigorous stirring. The reaction was left stirring for 18 h at
room temperature and then the mixture was extracted with CH2Cl2 (2 × 20 mL), washed with brine, and dried over
Na2SO4. The organic solvent was evaporated under
reduced pressure and the residue was purified by flash column chromatography
using EtOAc/petroleum ether (bp 40–60 °C) 2.5:7.5 as eluent.
Yield 59%; white solid; mp 93–95 °C; 1H NMR
(200 MHz, CDCl3): δ = 7.66–7.13 (m, 9H, arom),
4.16 (q, J = 7.2 Hz, 1H, CH), 3.76 (brs, 1H, OH),
2.90 (t, J = 7.4 Hz, 2H, PhCH2), 2.22–2.13
(m, 2H, CH2). 13C NMR (50 MHz, CDCl3): δ 140.6, 139.3, 138.6, 128.8, 128.7, 127.3, 127.1, 126.9,
119.9, 60.2, 36.4, 30.2; MS (ESI) m/z (%): 255 ([M + NH4]+, 100); Anal. Calcd for
C16H15NO: C, 80.98; H, 6.37; N, 5.90; found:
C, 80.64; H, 6.68; N, 5.73.
General Procedure for Synthesis
of 2-Hydroxy Esters 12 and 19
Cyanohydrins 11 and 18 (1 mmol) were dissolved in 4 N n class="Chemical">HCl/MeOH
(10 mL) and the
reaction mixture stirred for 24 h at room temperature. The organic
solvent was evaporated under reduced pressure. The residue was dissolved
in Et2O (10 mL) and re-evaporated. Dilution and evaporation
were repeated twice. The product was purified by flash column chromatography
using EtOAc/petroleum ether (bp 40–60 °C) 2:8 as eluent.
A solution of diethylaminosulfur trifluoride
(1.1 mmol,
0.15 mL) in n class="Chemical">CH2Cl2 (0.23 mL) was added to a
flame-dried flask, under Ar atmosphere, and cooled down to −78
°C. A solution of ester 12 (1 mmol, 0.29 g) in anhydrous
CH2Cl2 (0.3 mL) was added dropwise and the reaction
stirred for 2 h at −78 °C and then overnight at room temperature.
The reaction mixture was then concentrated under reduced pressure
and the product was purified by column chromatography using EtOAc/petroleum
ether (bp 40–60 °C) 2:8 as eluent. Yield 55%; yellowish
oil; 1H NMR (200 MHz, CDCl3): δ 7.09 (d, J = 8.5 Hz, 2H, arom), 6.83 (d, J = 8.5
Hz, 2H, arom), 4.90 (dt, J = 49.0 Hz, J = 6.1 Hz, 1H, CHF), 3.94 (t, J = 6.4 Hz, 2H, CH2O), 3.77 (s, 3H, OCH3), 2.58 (t, J = 7.3 Hz, 2H, PhCH2), 1.94–1.40 (m, 10H, CH2), 0.99 (t, J = 7.3 Hz, 3H, CH3); 13C NMR (50 MHz, CDCl3): δ 170.3 (d, J = 23.9 Hz), 157.1, 133.7, 129.0, 114.1, 88.7 (d, J = 184.0 Hz), 67.4, 52.02, 34.5, 32.1 (d, J = 21.0 Hz), 31.2, 31.0, 23.8 (d, J = 3 Hz), 19.1,
13.7; 19F NMR (188 MHz, CDCl3): δ −150.03
(qt, J = 24.4 Hz). MS (ESI) m/z (%): 314 ([M + NH4]+, 100); Anal.
Calcd for C17H25FO3: C, 68.89; H,
8.50; found: C, 68.66; H, 8.71.
General Procedure for Saponification
To a stirring
solution of methyl esters 9b, 12, 14, and 19 (1 mmol) inn class="Chemical">1,4-dioxane (10 mL), 2
N aqueous NaOH (2.0 mL) was added and the mixture stirred at room
temperature overnight. The solvent was evaporated under reduced pressure
and the residue was dissolved in H2O (10 mL) and extracted
with Et2O (3 × 10 mL). The aqueous layer was then
acidified with 2 N HCl (4.0 mL) and extracted with EtOAc (3 ×
10 mL) followed by drying over Na2SO4 and concentrating
in vacuo.
General Procedure for Synthesis of 23a–d and 26a,b
To a stirred solution of
carboxylic acid (1 mmol) in n class="Chemical">tetrahydrofuran (THF) (6 mL) and 20% aqueous
solution CsCO3 (1.1 mmol, 1.8 mL) were added and left stirring
for 10 min at 80 °C. The organic solvent was evaporated under
reduced pressure and the residue was dissolved in N,N-dimethylformamide (DMF) (15 mL). Subsequently,
the appropriate tert-butyl 5-bromoalkanoate, 22a or 22b (1.2 mmol), was added and the reaction
mixture was left vigorously stirring under reflux for 72 h. The reaction
mixture was concentrated in vacuo and then water (20 mL) was added
and extracted with EtOAc (2 × 20 mL). The organic phase was dried
(Na2SO4) and concentrated under reduced pressure.
The residue was purified by flash column chromatography using EtOAc/petroleum
ether (bp 40–60 °C) 3:7 or 2:8.
General
Procedure for Oxidation of 2-Hydroxy Esters
To a stirring
solution of 2-hydroxy esters 12 and 23a–d (1 mmol) in dry n class="Chemical">CH2Cl2 (10 mL), Dess–Martin
periodinane (1.1 mmol, 0.47 g)
was added and the reaction mixture was stirred for 1.5 h at room temperature.
The organic phase was washed with a mixture of Na2S2O3 10% and NaHCO3 10% (15 mL, 1:1, v/v)
and then with brine, dried over Na2SO4, and
concentrated under reduced pressure. The residue was purified by flash
column chromatography using EtOAc–petroleum ether (bp 40–60
°C) 2:8 as eluent.
General Procedure for Cleavage of tert-Butyl
Protecting Group
A solution of tert-butyl
esters 24a–d, 26a,b (1
mmol) inn class="Chemical">CH2Cl2 (5 mL), and trifluoroacetic
acid (TFA) (5 mL) was stirred for 1 h at room temperature. The organic
solvent was evaporated under reduced pressure and then toluene (5
mL) was added and re-evaporated twice. The product was purified by
precipitation with a mixture of EtOAc and petroleum ether (bp 40–60
°C) (5:95, v/v) or by column chromatography (CH2Cl2–MeOH, 95:5).
To a stirring solution of methyl ester 28 (1 mmol) in
n class="Chemical">MeOH (10 mL), 20% aqueous solution of Cs2CO3 (2 mmol, 3.3 mL) was added and the mixture was stirred at room temperature
overnight. The solvent was evaporated under reduced pressure and the
residue was dissolved in H2O (10 mL) and extracted with
Et2O (3 × 10 mL). The aqueous layer was then acidified
with 2 N HCl (4.0 mL) and extracted with EtOAc (3 × 10 mL), followed
by drying over Na2SO4 and concentrating in vacuo.
Yield 94%; white solid; mp 102–105 °C; 1H NMR
(200 MHz, CDCl3): δ 8.44 (s, 1H), 7.07 (d, J = 8.4 Hz, 2H, arom), 6.82 (d, J = 8.5
Hz, 2H, arom), 3.94 (t, J = 6.5 Hz, 2H, CH2O), 2.94–2.61 (m, 1H, CHH), 2.57–2.21
(m, 3H, PhCH2, CHH), 1.83–1.18
(m, 8H, 4 × CH2), 0.97 (t, J = 7.3
Hz, 3H); 13C NMR (50 MHz, CDCl3): δ 195.4,
157.3, 133.6, 129.2, 114.3, 114.3, 67.6, 37.6, 34.5, 31.3, 30.8, 22.4,
19.2, 13.9; HRMS (ESI) m/z: [M –
H] – Calcd for C16H21O4– 277.1445; found: 277.1444; Anal. Calcd
for C16H22O4: C, 69.04; H, 7.97;
found: C, 68.89; H, 8.21.
In Vitro PLA2 Activity Assays
Group-specific
mixed micelle modified Dole assays were employed to determine the
activity of human recombinant Gn class="Disease">IVA cPLA2, GVIA iPLA2, and GV sPLA2.[18−20] To achieve optimum activity,
the substrate was prepared using slightly different conditions for
each enzyme: (i) GIVAcPLA2 mixed micelle substrate consisted
of 400 μM Triton X-100, 95.3 μM PAPC, 1.7 μM arachidonyl-1-14C PAPC, and 3 μM PIP2 in a buffer containing
100 mM N-(2-hydroxyethyl)piperazine-N′-ethanesulfonic acid (HEPES) pH 7.5, 90 μM CaCl2, 2 mM dithiothreitol (DTT), and 0.1 mg/mL bovine serum albumin;
(ii) GVIA iPLA2 mixed micelle substrate consisted of 400
μM Triton X-100, 98.3 μM PAPC, and 1.7 μM arachidonyl-1-14C PAPC in a buffer containing 100 mM HEPES pH 7.5, 2 mM adenosine
5′-triphosphate, and 4 mM DTT; and (iii) GV sPLA2 mixed micelles substrate consisted of 400 μM Triton X-100,
98.3 μM PAPC, and 1.7 μM arachidonyl-1-14C
PAPC in a buffer containing 50 mM Tris–HCl pH 8.0, and 5 mM
CaCl2. Initially, the compounds were screened at 0.091
mol fraction (5 μL of 5 mM inhibitor in dimethyl sulfoxide)
in substrate (495 μL). XI(50) values
were determined for compounds exhibiting more than 95% inhibition.
Inhibition curves were generated using GraphPad Prism 5.0 and the
nonlinear regression by plotting percentage of inhibition vs log (mole
fraction) to calculate the reported XI(50) and its associated error.
The reactions were initiated
by the addition of test compound to 200 μL of preheated (37
°C) human plasma to yield a final concentration of 1 mg/mL. Samples
(50 μL) were taken at 0, 15, 30, and 60 min and n class="Chemical">acetonitrile
(200 μL) was added. The samples were subjected to vortex mixing
and then centrifugation for 5 min. The clear supernatants were analyzed
by LC-HRMS/MS using an AB Sciex 4600 Triple TOF combined with a micro-LC
Eksigent and an autosampler. Electrospray ionization (ESI)—negative
mode—was used for the MS experiments. Halo C18 2.7 μm,
90 Å, 0.5 × 50 mm2 from Eksigent was used as
a column and the mobile phase consisted of a gradient (A: acetonitrile/0.01%
formic acid—isopropanol 80/20 v/v; B: H2O/0.01%
formic acid). The data acquisition was carried out with MultiQuant
from AB SCIEX (version 3.0). Each sample was studied in triplicate.
The plot of the percentage of the remaining compound in comparison
to the initial concentration vs time was designed.
Authors: David A Six; Efrosini Barbayianni; Vassilios Loukas; Violetta Constantinou-Kokotou; Dimitra Hadjipavlou-Litina; Daren Stephens; Alan C Wong; Victoria Magrioti; Panagiota Moutevelis-Minakakis; Sharon F Baker; Edward A Dennis; George Kokotos Journal: J Med Chem Date: 2007-08-02 Impact factor: 7.446
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