Literature DB >> 30193110

Decoding the Genomics of Abdominal Aortic Aneurysm.

Jingjing Li1, Cuiping Pan2, Sai Zhang3, Joshua M Spin4, Alicia Deng4, Lawrence L K Leung4, Ronald L Dalman5, Philip S Tsao6, Michael Snyder7.   

Abstract

A key aspect of genomic medicine is to make individualized clinical decisions from personal genomes. We developed a machine-learning framework to integrate personal genomes and electronic health record (EHR) data and used this framework to study abdominal aortic aneurysm (AAA), a prevalent irreversible cardiovascular disease with unclear etiology. Performing whole-genome sequencing on AAA patients and controls, we demonstrated its predictive precision solely from personal genomes. By modeling personal genomes with EHRs, this framework quantitatively assessed the effectiveness of adjusting personal lifestyles given personal genome baselines, demonstrating its utility as a personal health management tool. We showed that this new framework agnostically identified genetic components involved in AAA, which were subsequently validated in human aortic tissues and in murine models. Our study presents a new framework for disease genome analysis, which can be used for both health management and understanding the biological architecture of complex diseases. VIDEO ABSTRACT.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  HEAL; abdominal aortic aneurysm; cardiovascular diseases; complex disease; electronic health record; lifestyle; machine learning; personal genome; personal health management; precision medicine

Mesh:

Year:  2018        PMID: 30193110     DOI: 10.1016/j.cell.2018.07.021

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  24 in total

1.  Predicting abdominal aortic aneurysm growth using patient-oriented growth models with two-step Bayesian inference.

Authors:  Emrah Akkoyun; Sebastian T Kwon; Aybar C Acar; Whal Lee; Seungik Baek
Journal:  Comput Biol Med       Date:  2020-01-13       Impact factor: 4.589

Review 2.  Artificial Intelligence Transforms the Future of Health Care.

Authors:  Nariman Noorbakhsh-Sabet; Ramin Zand; Yanfei Zhang; Vida Abedi
Journal:  Am J Med       Date:  2019-01-31       Impact factor: 4.965

Review 3.  Looking beyond the hype: Applied AI and machine learning in translational medicine.

Authors:  Tzen S Toh; Frank Dondelinger; Dennis Wang
Journal:  EBioMedicine       Date:  2019-08-26       Impact factor: 8.143

4.  Cardioinformatics: the nexus of bioinformatics and precision cardiology.

Authors:  Bohdan B Khomtchouk; Diem-Trang Tran; Kasra A Vand; Matthew Might; Or Gozani; Themistocles L Assimes
Journal:  Brief Bioinform       Date:  2020-12-01       Impact factor: 11.622

5.  Gene-Environment Interaction in the Era of Precision Medicine.

Authors:  Jingjing Li; Xiao Li; Sai Zhang; Michael Snyder
Journal:  Cell       Date:  2019-03-21       Impact factor: 41.582

6.  Single-cell Transcriptomics Reveals Dynamic Role of Smooth Muscle Cells and Enrichment of Immune Cell Subsets in Human Abdominal Aortic Aneurysms.

Authors:  Frank M Davis; Lam C Tsoi; Feiyang Ma; Rachael Wasikowski; Bethany B Moore; Steven L Kunkel; Johann E Gudjonsson; Katherine A Gallagher
Journal:  Ann Surg       Date:  2022-06-28       Impact factor: 13.787

7.  Risk prediction for abdominal aortic aneurysm: One size does not necessarily fit all.

Authors:  Jan Sokol; Patricia K Nguyen
Journal:  J Nucl Cardiol       Date:  2022-02-16       Impact factor: 3.872

8.  Response by Pan and Tsao to Letter Regarding Article, "Genetic Architecture of Abdominal Aortic Aneurysm in the Million Veteran Program".

Authors:  Cuiping Pan; Philip S Tsao
Journal:  Circulation       Date:  2021-04-26       Impact factor: 29.690

9.  Linking obesity with abdominal aortic aneurysm development.

Authors:  Hans-Henning Eckstein; Lars Maegdefessel
Journal:  Eur Heart J       Date:  2020-07-07       Impact factor: 29.983

Review 10.  Leveraging Machine Learning and Artificial Intelligence to Improve Peripheral Artery Disease Detection, Treatment, and Outcomes.

Authors:  Alyssa M Flores; Falen Demsas; Nicholas J Leeper; Elsie Gyang Ross
Journal:  Circ Res       Date:  2021-06-10       Impact factor: 23.213

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