Literature DB >> 30191807

Dual-Function RNAs.

Medha Raina1, Alisa King2, Colleen Bianco2, Carin K Vanderpool2.   

Abstract

Bacteria are known to use RNA, either as mRNAs encoding proteins or as noncoding small RNAs (sRNAs), to regulate numerous biological processes. However, a few sRNAs have two functions: they act as base-pairing RNAs and encode a small protein with additional regulatory functions. Thus, these so called "dual-function" sRNAs can serve as both a riboregulator and an mRNA. In some cases, these two functions can act independently within the same pathway, while in other cases, the base-pairing function and protein function act in different pathways. Here, we discuss the five known dual-function sRNAs-SgrS from enteric species, RNAIII and Psm-mec from Staphylococcus aureus, Pel RNA from Streptococcus pyogenes, and SR1 from Bacillus subtilis-and review their mechanisms of action and roles in regulating diverse biological processes. We also discuss the prospect of finding additional dual-function sRNAs and future challenges in studying the overlap and competition between the functions.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30191807      PMCID: PMC6130917          DOI: 10.1128/microbiolspec.RWR-0032-2018

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  93 in total

1.  Mgr, a novel global regulator in Staphylococcus aureus.

Authors:  Thanh T Luong; Steven W Newell; Chia Y Lee
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

2.  Transcriptional repressor CcpN from Bacillus subtilis compensates asymmetric contact distribution by cooperative binding.

Authors:  Andreas Licht; Sabine Brantl
Journal:  J Mol Biol       Date:  2006-09-12       Impact factor: 5.469

3.  Mutational analysis of the group A streptococcal operon encoding streptolysin S and its virulence role in invasive infection.

Authors:  Vivekanand Datta; Sandra M Myskowski; Laura A Kwinn; Daniel N Chiem; Nissi Varki; Rita G Kansal; Malak Kotb; Victor Nizet
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

4.  Small RNA binding-site multiplicity involved in translational regulation of a polycistronic mRNA.

Authors:  Jennifer B Rice; Divya Balasubramanian; Carin K Vanderpool
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-17       Impact factor: 11.205

5.  Clostridial VirR/VirS regulon involves a regulatory RNA molecule for expression of toxins.

Authors:  Tohru Shimizu; Harumi Yaguchi; Kaori Ohtani; Sayera Banu; Hideo Hayashi
Journal:  Mol Microbiol       Date:  2002-01       Impact factor: 3.501

Review 6.  Riboregulators and the role of Hfq in photosynthetic bacteria.

Authors:  Wolfgang R Hess; Bork A Berghoff; Annegret Wilde; Claudia Steglich; Gabriele Klug
Journal:  RNA Biol       Date:  2014-02-10       Impact factor: 4.652

7.  Genetic locus for streptolysin S production by group A streptococcus.

Authors:  V Nizet; B Beall; D J Bast; V Datta; L Kilburn; D E Low; J C De Azavedo
Journal:  Infect Immun       Date:  2000-07       Impact factor: 3.441

Review 8.  Ins and outs of glucose transport systems in eubacteria.

Authors:  Knut Jahreis; Elisângela F Pimentel-Schmitt; Reinhold Brückner; Fritz Titgemeyer
Journal:  FEMS Microbiol Rev       Date:  2008-07-16       Impact factor: 16.408

9.  Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule.

Authors:  R P Novick; H F Ross; S J Projan; J Kornblum; B Kreiswirth; S Moghazeh
Journal:  EMBO J       Date:  1993-10       Impact factor: 11.598

10.  Global Mapping of Small RNA-Target Interactions in Bacteria.

Authors:  Sahar Melamed; Asaf Peer; Raya Faigenbaum-Romm; Yair E Gatt; Niv Reiss; Amir Bar; Yael Altuvia; Liron Argaman; Hanah Margalit
Journal:  Mol Cell       Date:  2016-09-01       Impact factor: 17.970

View more
  15 in total

Review 1.  Alternative ORFs and small ORFs: shedding light on the dark proteome.

Authors:  Mona Wu Orr; Yuanhui Mao; Gisela Storz; Shu-Bing Qian
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

2.  Multiple information carried by RNAs: total eclipse or a light at the end of the tunnel?

Authors:  Baptiste Bogard; Claire Francastel; Florent Hubé
Journal:  RNA Biol       Date:  2020-06-26       Impact factor: 4.652

3.  Synthetic dual-function RNA reveals features necessary for target regulation.

Authors:  Jordan J Aoyama; Medha Raina; Gisela Storz
Journal:  J Bacteriol       Date:  2021-08-30       Impact factor: 3.476

Review 4.  Thirty Years of sRNA-Mediated Regulation in Staphylococcus aureus: From Initial Discoveries to In Vivo Biological Implications.

Authors:  Guillaume Menard; Chloé Silard; Marie Suriray; Astrid Rouillon; Yoann Augagneur
Journal:  Int J Mol Sci       Date:  2022-07-01       Impact factor: 6.208

5.  Genome-Wide Identification of Novel sRNAs in Streptococcus mutans.

Authors:  Madeline C Krieger; Justin Merritt; Rahul Raghavan
Journal:  J Bacteriol       Date:  2022-03-14       Impact factor: 3.476

Review 6.  Prevalence of small base-pairing RNAs derived from diverse genomic loci.

Authors:  Philip P Adams; Gisela Storz
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-03-05       Impact factor: 4.490

Review 7.  Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica.

Authors:  Jens Hör; Gianluca Matera; Jörg Vogel; Susan Gottesman; Gisela Storz
Journal:  EcoSal Plus       Date:  2020-03

8.  Small Proteins; Big Questions.

Authors:  Todd Gray; Gisela Storz; Kai Papenfort
Journal:  J Bacteriol       Date:  2021-07-26       Impact factor: 3.476

Review 9.  Bacterial 3'UTRs: A Useful Resource in Post-transcriptional Regulation.

Authors:  Pilar Menendez-Gil; Alejandro Toledo-Arana
Journal:  Front Mol Biosci       Date:  2021-01-08

10.  Galleria mellonella Larvae as an Infection Model to Investigate sRNA-Mediated Pathogenesis in Staphylococcus aureus.

Authors:  Guillaume Ménard; Astrid Rouillon; Gevorg Ghukasyan; Mathieu Emily; Brice Felden; Pierre-Yves Donnio
Journal:  Front Cell Infect Microbiol       Date:  2021-04-19       Impact factor: 5.293

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.