Literature DB >> 30187316

OIPAV: an Integrated Software System for Ophthalmic Image Processing, Analysis, and Visualization.

Lichun Zhang1, Dehui Xiang1, Chao Jin1, Fei Shi1, Kai Yu1, Xinjian Chen2.   

Abstract

Ophthalmic medical images, such as optical coherence tomography (OCT) images and color photo of fundus, provide valuable information for clinical diagnosis and treatment of ophthalmic diseases. In this paper, we introduce a software system specially oriented to ophthalmic images processing, analysis, and visualization (OIPAV) to assist users. OIPAV is a cross-platform system built on a set of powerful and widely used toolkit libraries. Based on the plugin mechanism, the system has an extensible framework. It provides rich functionalities including data I/O, image processing, interaction, ophthalmic diseases detection, data analysis, and visualization. By using OIPAV, users can easily access to the ophthalmic image data manufactured from different imaging devices, facilitate workflows of processing ophthalmic images, and improve quantitative evaluations. With a satisfying function scalability and expandability, the software is applicable for both ophthalmic researchers and clinicians.

Entities:  

Keywords:  Computer aided diagnosis; Image analysis; Image processing; Image visualization; Ophthalmic image; Software system

Year:  2019        PMID： 30187316      PMCID： PMC6382642          DOI： 10.1007/s10278-017-0047-6

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN： 0897-1889            Impact factor:   4.056


  21 in total

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Authors:  Bram van Ginneken; Cornelia M Schaefer-Prokop; Mathias Prokop
Journal:  Radiology       Date:  2011-12       Impact factor: 11.105

2.  Automated lamina cribrosa microstructural segmentation in optical coherence tomography scans of healthy and glaucomatous eyes.

Authors:  Zach Nadler; Bo Wang; Gadi Wollstein; Jessica E Nevins; Hiroshi Ishikawa; Larry Kagemann; Ian A Sigal; R Daniel Ferguson; Daniel X Hammer; Ireneusz Grulkowski; Jonathan J Liu; Martin F Kraus; Chen D Lu; Joachim Hornegger; James G Fujimoto; Joel S Schuman
Journal:  Biomed Opt Express       Date:  2013-10-24       Impact factor: 3.732

3.  The medical exploration toolkit: an efficient support for visual computing in surgical planning and training.

Authors:  Konrad Mühler; Christian Tietjen; Felix Ritter; Bernhard Preim
Journal:  IEEE Trans Vis Comput Graph       Date:  2010 Jan-Feb       Impact factor: 4.579

4.  The Medical Imaging Interaction Toolkit: challenges and advances : 10 years of open-source development.

Authors:  Marco Nolden; Sascha Zelzer; Alexander Seitel; Diana Wald; Michael Müller; Alfred M Franz; Daniel Maleike; Markus Fangerau; Matthias Baumhauer; Lena Maier-Hein; Klaus H Maier-Hein; Hans-Peter Meinzer; Ivo Wolf
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-04-16       Impact factor: 2.924

5.  Enhanced low-rank + sparsity decomposition for speckle reduction in optical coherence tomography.

Authors:  Ivica Kopriva; Fei Shi; Xinjian Chen
Journal:  J Biomed Opt       Date:  2016-07-01       Impact factor: 3.170

6.  Automatic detection of microaneurysms in retinal fundus images.

Authors:  Bo Wu; Weifang Zhu; Fei Shi; Shuxia Zhu; Xinjian Chen
Journal:  Comput Med Imaging Graph       Date:  2016-08-04       Impact factor: 4.790

7.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

8.  A Framework for Classification and Segmentation of Branch Retinal Artery Occlusion in SD-OCT.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2017-04-25       Impact factor: 10.856

9.  Automatic Three-dimensional Detection of Photoreceptor Ellipsoid Zone Disruption Caused by Trauma in the OCT.

Authors:  Weifang Zhu; Haoyu Chen; Heming Zhao; Bei Tian; Lirong Wang; Fei Shi; Dehui Xiang; Xiaohong Luo; Enting Gao; Li Zhang; Yilong Yin; Xinjian Chen
Journal:  Sci Rep       Date:  2016-05-09       Impact factor: 4.379

10.  Quantitative analysis of retinal layers on three-dimensional spectral-domain optical coherence tomography for pituitary adenoma.

Authors:  Min Sun; Zhiqiang Zhang; Chiyuan Ma; Suihua Chen; Xinjian Chen
Journal:  PLoS One       Date:  2017-06-19       Impact factor: 3.240
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  1 in total

1.  AnatomySketch: An Extensible Open-Source Software Platform for Medical Image Analysis Algorithm Development.

Authors:  Mingrui Zhuang; Zhonghua Chen; Hongkai Wang; Hong Tang; Jiang He; Bobo Qin; Yuxin Yang; Xiaoxian Jin; Mengzhu Yu; Baitao Jin; Taijing Li; Lauri Kettunen
Journal:  J Digit Imaging       Date:  2022-06-29       Impact factor: 4.056
  1 in total

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