Literature DB >> 30181147

Spontaneous cross-linking of proteins at aspartate and asparagine residues is mediated via a succinimide intermediate.

Michael G Friedrich1, Zhen Wang2, Kevin L Schey2, Roger J W Truscott3.   

Abstract

The breakdown of long-lived proteins (LLPs) is associated with aging, as well as disease; however, our understanding of the molecular processes involved is still limited. Of particular relevance, cross-linked proteins are often reported in aged tissues but the mechanisms for their formation are poorly understood. In the present study, sites of protein cross-linking in human ocular lenses were characterized using proteomic techniques. In long-lived lens proteins, several sites of cross-linking were found to involve the addition of Lys to Asp or Asn residues. Using model peptides containing Asp or Asn, a mechanism was elucidated that involves a succinimide intermediate. Succinimides formed readily from Asn at neutral pH, whereas a higher rate of formation from Asp peptides was observed at more acidic pHs. Succinimides were found to be relatively stable in the absence of nucleophiles. Since racemization of Asp residues, as well as deamidation of Asn, involves a succinimide intermediate, sites of d-Asp and isoAsp in LLPs should also be considered as potential sites of protein covalent cross-linking.
© 2018 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  aging; isopeptide bonds; lens; long-lived proteins; racemization

Mesh:

Substances:

Year:  2018        PMID: 30181147      PMCID: PMC7029958          DOI: 10.1042/BCJ20180529

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  42 in total

1.  Kinetics and mechanisms of deamidation and covalent amide-linked adduct formation in amorphous lyophiles of a model asparagine-containing Peptide.

Authors:  Michael P Dehart; Bradley D Anderson
Journal:  Pharm Res       Date:  2011-10-18       Impact factor: 4.200

2.  DehydroalanylGly, a new post translational modification resulting from the breakdown of glutathione.

Authors:  Michael G Friedrich; Zhen Wang; Kevin L Schey; Roger J W Truscott
Journal:  Biochim Biophys Acta Gen Subj       Date:  2018-01-06       Impact factor: 3.770

3.  Quantification of thioether-linked glutathione modifications in human lens proteins.

Authors:  Zhen Wang; Kevin L Schey
Journal:  Exp Eye Res       Date:  2018-06-04       Impact factor: 3.467

4.  Elucidation of a novel polypeptide cross-link involving 3-hydroxykynurenine.

Authors:  J A Aquilina; J A Carver; R J Truscott
Journal:  Biochemistry       Date:  1999-08-31       Impact factor: 3.162

5.  Post-translational modifications of aquaporin 0 (AQP0) in the normal human lens: spatial and temporal occurrence.

Authors:  Lauren E Ball; Donita L Garland; Rosalie K Crouch; Kevin L Schey
Journal:  Biochemistry       Date:  2004-08-03       Impact factor: 3.162

6.  Deamidation, isomerization, and racemization at asparaginyl and aspartyl residues in peptides. Succinimide-linked reactions that contribute to protein degradation.

Authors:  T Geiger; S Clarke
Journal:  J Biol Chem       Date:  1987-01-15       Impact factor: 5.157

7.  Organophosphates of the crystalline lens: a nuclear magnetic resonance spectroscopic study.

Authors:  J V Greiner; S J Kopp; D R Sanders; T Glonek
Journal:  Invest Ophthalmol Vis Sci       Date:  1981-11       Impact factor: 4.799

8.  Propensity for spontaneous succinimide formation from aspartyl and asparaginyl residues in cellular proteins.

Authors:  S Clarke
Journal:  Int J Pept Protein Res       Date:  1987-12

9.  Effect of protein conformation on rate of deamidation: ribonuclease A.

Authors:  S J Wearne; T E Creighton
Journal:  Proteins       Date:  1989

10.  Human protein aging: modification and crosslinking through dehydroalanine and dehydrobutyrine intermediates.

Authors:  Zhen Wang; Brian Lyons; Roger J W Truscott; Kevin L Schey
Journal:  Aging Cell       Date:  2013-11-19       Impact factor: 9.304

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  11 in total

Review 1.  Spatiotemporal changes in the human lens proteome: Critical insights into long-lived proteins.

Authors:  Kevin L Schey; Zhen Wang; Michael G Friedrich; Donita L Garland; Roger J W Truscott
Journal:  Prog Retin Eye Res       Date:  2019-11-06       Impact factor: 21.198

2.  Spontaneous Cleavage at Glu and Gln Residues in Long-Lived Proteins.

Authors:  Michael G Friedrich; Zhen Wang; Kevin L Schey; Roger J W Truscott
Journal:  ACS Chem Biol       Date:  2021-10-22       Impact factor: 4.634

3.  Mechanism of protein cleavage at asparagine leading to protein-protein cross-links.

Authors:  Michael G Friedrich; Zhen Wang; Kevin L Schey; Roger J W Truscott
Journal:  Biochem J       Date:  2019-12-23       Impact factor: 3.857

Review 4.  New insights into the mechanisms of age-related protein-protein crosslinking in the human lens.

Authors:  Kevin L Schey; Zhen Wang; Michael G Friedrich; Roger J W Truscott
Journal:  Exp Eye Res       Date:  2021-06-17       Impact factor: 3.770

Review 5.  Proteomic characterization of the human lens and Cataractogenesis.

Authors:  Lee S Cantrell; Kevin L Schey
Journal:  Expert Rev Proteomics       Date:  2021-04-14       Impact factor: 4.250

6.  Cleavage C-terminal to Asp leads to covalent crosslinking of long-lived human proteins.

Authors:  Zhen Wang; Michael G Friedrich; Roger J W Truscott; Kevin L Schey
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2019-06-19       Impact factor: 4.125

7.  Spontaneous protein-protein crosslinking at glutamine and glutamic acid residues in long-lived proteins.

Authors:  Michael G Friedrich; Zhen Wang; Kevin L Schey; Roger J W Truscott
Journal:  Biochem J       Date:  2021-01-29       Impact factor: 3.766

8.  Oxygen-dependent bond formation with FIH regulates the activity of the client protein OTUB1.

Authors:  Christina Pickel; Julia Günter; Amalia Ruiz-Serrano; Patrick Spielmann; Jacqueline-Alba Fabrizio; Witold Wolski; Daniel J Peet; Roland H Wenger; Carsten C Scholz
Journal:  Redox Biol       Date:  2019-07-02       Impact factor: 11.799

9.  DMTMM-Mediated Intramolecular Cyclization of Acidic Residues in Peptides/Proteins.

Authors:  Chi-Hua Lee; Yuan-Chao Lou; Andrew H-J Wang
Journal:  ACS Omega       Date:  2021-02-05

10.  Detection of Isopeptide Bonds in Monoclonal Antibody Aggregates.

Authors:  Thomas Powell; Michael J Knight; Amanda Wood; John O'Hara; William Burkitt
Journal:  Pharm Res       Date:  2021-09-15       Impact factor: 4.200

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