Literature DB >> 30176583

Pelvic Organ Segmentation Using Distinctive Curve Guided Fully Convolutional Networks.

Kelei He, Xiaohuan Cao, Yinghuan Shi, Dong Nie, Yang Gao, Dinggang Shen.   

Abstract

Accurate segmentation of pelvic organs (i.e., prostate, bladder, and rectum) from CT image is crucial for effective prostate cancer radiotherapy. However, it is a challenging task due to: 1) low soft tissue contrast in CT images and 2) large shape and appearance variations of pelvic organs. In this paper, we employ a two-stage deep learning-based method, with a novel distinctive curve-guided fully convolutional network (FCN), to solve the aforementioned challenges. Specifically, the first stage is for fast and robust organ detection in the raw CT images. It is designed as a coarse segmentation network to provide region proposals for three pelvic organs. The second stage is for fine segmentation of each organ, based on the region proposal results. To better identify those indistinguishable pelvic organ boundaries, a novel morphological representation, namely, distinctive curve, is also introduced to help better conduct the precise segmentation. To implement this, in this second stage, a multi-task FCN is initially utilized to learn the distinctive curve and the segmentation map separately and then combine these two tasks to produce accurate segmentation map. The final segmentation results of all three pelvic organs are generated by a weighted max-voting strategy. We have conducted exhaustive experiments on a large and diverse pelvic CT data set for evaluating our proposed method. The experimental results demonstrate that our proposed method is accurate and robust for this challenging segmentation task, by also outperforming the state-of-the-art segmentation methods.

Entities:  

Mesh:

Year:  2018        PMID: 30176583      PMCID: PMC6392049          DOI: 10.1109/TMI.2018.2867837

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  21 in total

1.  Accurate Segmentation of CT Male Pelvic Organs via Regression-Based Deformable Models and Multi-Task Random Forests.

Authors:  Yaozong Gao; Yeqin Shao; Jun Lian; Andrew Z Wang; Ronald C Chen; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2016-01-18       Impact factor: 10.048

2.  Model-based segmentation of medical imagery by matching distributions.

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Journal:  IEEE Trans Med Imaging       Date:  2005-03       Impact factor: 10.048

3.  Precise segmentation of multiple organs in CT volumes using learning-based approach and information theory.

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4.  Segmentation of pelvic structures for planning CT using a geometrical shape model tuned by a multi-scale edge detector.

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5.  Urinary bladder segmentation in CT urography using deep-learning convolutional neural network and level sets.

Authors:  Kenny H Cha; Lubomir Hadjiiski; Ravi K Samala; Heang-Ping Chan; Elaine M Caoili; Richard H Cohan
Journal:  Med Phys       Date:  2016-04       Impact factor: 4.071

6.  Locally-constrained boundary regression for segmentation of prostate and rectum in the planning CT images.

Authors:  Yeqin Shao; Yaozong Gao; Qian Wang; Xin Yang; Dinggang Shen
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7.  FULLY CONVOLUTIONAL NETWORKS FOR MULTI-MODALITY ISOINTENSE INFANT BRAIN IMAGE SEGMENTATION.

Authors:  Dong Nie; Li Wang; Yaozong Gao; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016

8.  Detecting Anatomical Landmarks for Fast Alzheimer's Disease Diagnosis.

Authors:  Jun Zhang; Yue Gao; Yaozong Gao; Brent C Munsell; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2016-06-20       Impact factor: 10.048

9.  SEMI-SUPERVISED LEARNING FOR PELVIC MR IMAGE SEGMENTATION BASED ON MULTI-TASK RESIDUAL FULLY CONVOLUTIONAL NETWORKS.

Authors:  Zishun Feng; Dong Nie; Li Wang; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

10.  Spatial distribution and longitudinal development of deep cortical sulcal landmarks in infants.

Authors:  Yu Meng; Gang Li; Weili Lin; John H Gilmore; Dinggang Shen
Journal:  Neuroimage       Date:  2014-06-17       Impact factor: 6.556

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  11 in total

1.  Multi-Organ Segmentation Over Partially Labeled Datasets With Multi-Scale Feature Abstraction.

Authors:  Xi Fang; Pingkun Yan
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

2.  Iterative Label Denoising Network: Segmenting Male Pelvic Organs in CT From 3D Bounding Box Annotations.

Authors:  Shuai Wang; Qian Wang; Yeqin Shao; Liangqiong Qu; Chunfeng Lian; Jun Lian; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2020-01-27       Impact factor: 4.538

3.  COVID-19 Screening in Chest X-Ray Images Using Lung Region Priors.

Authors:  Jianpeng An; Qing Cai; Zhiyong Qu; Zhongke Gao
Journal:  IEEE J Biomed Health Inform       Date:  2021-11-05       Impact factor: 5.772

4.  Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy.

Authors:  Hongfei Sun; Rongbo Fan; Chunying Li; Zhengda Lu; Kai Xie; Xinye Ni; Jianhua Yang
Journal:  Front Oncol       Date:  2021-03-12       Impact factor: 6.244

5.  Asymmetrical Multi-task Attention U-Net for the Segmentation of Prostate Bed in CT Image.

Authors:  Xuanang Xu; Chunfeng Lian; Shuai Wang; Andrew Wang; Trevor Royce; Ronald Chen; Jun Lian; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

6.  Research on obtaining pseudo CT images based on stacked generative adversarial network.

Authors:  Hongfei Sun; Zhengda Lu; Rongbo Fan; Wenjun Xiong; Kai Xie; Xinye Ni; Jianhua Yang
Journal:  Quant Imaging Med Surg       Date:  2021-05

Review 7.  A review of deep learning based methods for medical image multi-organ segmentation.

Authors:  Yabo Fu; Yang Lei; Tonghe Wang; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Phys Med       Date:  2021-05-13       Impact factor: 2.685

8.  Attention-RefNet: Interactive Attention Refinement Network for Infected Area Segmentation of COVID-19.

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Journal:  IEEE J Biomed Health Inform       Date:  2021-07-27       Impact factor: 7.021

9.  Boundary Coding Representation for Organ Segmentation in Prostate Cancer Radiotherapy.

Authors:  Shuai Wang; Mingxia Liu; Jun Lian; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2020-12-29       Impact factor: 10.048

10.  Semi-automatic sigmoid colon segmentation in CT for radiation therapy treatment planning via an iterative 2.5-D deep learning approach.

Authors:  Yesenia Gonzalez; Chenyang Shen; Hyunuk Jung; Dan Nguyen; Steve B Jiang; Kevin Albuquerque; Xun Jia
Journal:  Med Image Anal       Date:  2020-12-16       Impact factor: 8.545

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