Literature DB >> 34033549

Attention-RefNet: Interactive Attention Refinement Network for Infected Area Segmentation of COVID-19.

Titinunt Kitrungrotsakul, Qingqing Chen, Huitao Wu, Yutaro Iwamoto, Hongjie Hu, Wenchao Zhu, Chao Chen, Fangyi Xu, Yong Zhou, Lanfen Lin, Ruofeng Tong, Jingsong Li, Yen-Wei Chen.   

Abstract

COVID-19 pneumonia is a disease that causes an existential health crisis in many people by directly affecting and damaging lung cells. The segmentation of infected areas from computed tomography (CT) images can be used to assist and provide useful information for COVID-19 diagnosis. Although several deep learning-based segmentation methods have been proposed for COVID-19 segmentation and have achieved state-of-the-art results, the segmentation accuracy is still not high enough (approximately 85%) due to the variations of COVID-19 infected areas (such as shape and size variations) and the similarities between COVID-19 and non-COVID-infected areas. To improve the segmentation accuracy of COVID-19 infected areas, we propose an interactive attention refinement network (Attention RefNet). The interactive attention refinement network can be connected with any segmentation network and trained with the segmentation network in an end-to-end fashion. We propose a skip connection attention module to improve the important features in both segmentation and refinement networks and a seed point module to enhance the important seeds (positions) for interactive refinement. The effectiveness of the proposed method was demonstrated on public datasets (COVID-19CTSeg and MICCAI) and our private multicenter dataset. The segmentation accuracy was improved to more than 90%. We also confirmed the generalizability of the proposed network on our multicenter dataset. The proposed method can still achieve high segmentation accuracy.

Entities:  

Mesh:

Year:  2021        PMID: 34033549      PMCID: PMC8545076          DOI: 10.1109/JBHI.2021.3082527

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   7.021


  31 in total

1.  Random walks for interactive organ segmentation in two and three dimensions: implementation and validation.

Authors:  Leo Grady; Thomas Schiwietz; Shmuel Aharon; Rüdiger Westermann
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

2.  Automated segmentation of the liver from 3D CT images using probabilistic atlas and multilevel statistical shape model.

Authors:  Toshiyuki Okada; Ryuji Shimada; Masatoshi Hori; Masahiko Nakamoto; Yen-Wei Chen; Hironobu Nakamura; Yoshinobu Sato
Journal:  Acad Radiol       Date:  2008-11       Impact factor: 3.173

3.  Fully Convolutional Networks for Semantic Segmentation.

Authors:  Evan Shelhamer; Jonathan Long; Trevor Darrell
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-05-24       Impact factor: 6.226

4.  Automatic Organ Segmentation for CT Scans Based on Super-Pixel and Convolutional Neural Networks.

Authors:  Xiaoming Liu; Shuxu Guo; Bingtao Yang; Shuzhi Ma; Huimao Zhang; Jing Li; Changjian Sun; Lanyi Jin; Xueyan Li; Qi Yang; Yu Fu
Journal:  J Digit Imaging       Date:  2018-10       Impact factor: 4.056

5.  Iteratively Pruned Deep Learning Ensembles for COVID-19 Detection in Chest X-rays.

Authors:  Sivaramakrishnan Rajaraman; Jen Siegelman; Philip O Alderson; Lucas S Folio; Les R Folio; Sameer K Antani
Journal:  IEEE Access       Date:  2020-06-19       Impact factor: 3.367

6.  DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.

Authors:  Guotai Wang; Maria A Zuluaga; Wenqi Li; Rosalind Pratt; Premal A Patel; Michael Aertsen; Tom Doel; Anna L David; Jan Deprest; Sebastien Ourselin; Tom Vercauteren
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2018-06-01       Impact factor: 6.226

7.  Automatic COVID-19 CT segmentation using U-Net integrated spatial and channel attention mechanism.

Authors:  Tongxue Zhou; Stéphane Canu; Su Ruan
Journal:  Int J Imaging Syst Technol       Date:  2020-11-24       Impact factor: 2.177

Review 8.  COVID-19 pneumonia: A review of typical CT findings and differential diagnosis.

Authors:  C Hani; N H Trieu; I Saab; S Dangeard; S Bennani; G Chassagnon; M-P Revel
Journal:  Diagn Interv Imaging       Date:  2020-04-03       Impact factor: 4.026

9.  CT image visual quantitative evaluation and clinical classification of coronavirus disease (COVID-19).

Authors:  Kunwei Li; Yijie Fang; Wenjuan Li; Cunxue Pan; Peixin Qin; Yinghua Zhong; Xueguo Liu; Mingqian Huang; Yuting Liao; Shaolin Li
Journal:  Eur Radiol       Date:  2020-03-25       Impact factor: 5.315

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.