Literature DB >> 30173000

Equilibrated warping: Finite element image registration with finite strain equilibrium gap regularization.

M Genet1, C T Stoeck2, C von Deuster2, L C Lee3, S Kozerke2.   

Abstract

In this paper, we propose a novel continuum finite strain formulation of the equilibrium gap regularization for image registration. The equilibrium gap regularization essentially penalizes any deviation from the solution of a hyperelastic body in equilibrium with arbitrary loads prescribed at the boundary. It thus represents a regularization with strong mechanical basis, especially suited for cardiac image analysis. We describe the consistent linearization and discretization of the regularized image registration problem, in the framework of the finite elements method. The method is implemented using FEniCS & VTK, and distributed as a freely available python library. We show that the equilibrated warping method is effective and robust: regularization strength and image noise have minimal impact on motion tracking, especially when compared to strain-based regularization methods such as hyperelastic warping. We also show that equilibrated warping is able to extract main deformation features on both tagged and untagged cardiac magnetic resonance images.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cardiac magnetic resonance imaging; Equilibrium gap regularization; Finite elements; Image registration

Mesh:

Year:  2018        PMID: 30173000     DOI: 10.1016/j.media.2018.07.007

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  8 in total

1.  Left Ventricular Torsion Obtained Using Equilibrated Warping in Patients with Repaired Tetralogy of Fallot.

Authors:  Daniel Alexander Castellanos; Kateřina Škardová; Abhijit Bhattaru; Ezgi Berberoglu; Gerald Greil; Animesh Tandon; Jeanne Dillenbeck; Barbara Burkhardt; Tarique Hussain; Martin Genet; Radomir Chabiniok
Journal:  Pediatr Cardiol       Date:  2021-04-26       Impact factor: 1.655

2.  Three-dimensional biventricular strains in pulmonary arterial hypertension patients using hyperelastic warping.

Authors:  Hua Zou; Shuang Leng; Ce Xi; Xiaodan Zhao; Angela S Koh; Fei Gao; Ju Le Tan; Ru-San Tan; John C Allen; Lik Chuan Lee; Martin Genet; Liang Zhong
Journal:  Comput Methods Programs Biomed       Date:  2020-01-17       Impact factor: 5.428

3.  In-silico study of accuracy and precision of left-ventricular strain quantification from 3D tagged MRI.

Authors:  Ezgi Berberoğlu; Christian T Stoeck; Philippe Moireau; Sebastian Kozerke; Martin Genet
Journal:  PLoS One       Date:  2021-11-05       Impact factor: 3.240

4.  Estimating cardiomyofiber strain in vivo by solving a computational model.

Authors:  Luigi E Perotti; Ilya A Verzhbinsky; Kévin Moulin; Tyler E Cork; Michael Loecher; Daniel Balzani; Daniel B Ennis
Journal:  Med Image Anal       Date:  2020-12-05       Impact factor: 8.545

5.  Quantification of Biventricular Strains in Heart Failure With Preserved Ejection Fraction Patient Using Hyperelastic Warping Method.

Authors:  Hua Zou; Ce Xi; Xiaodan Zhao; Angela S Koh; Fei Gao; Yi Su; Ru-San Tan; John Allen; Lik Chuan Lee; Martin Genet; Liang Zhong
Journal:  Front Physiol       Date:  2018-09-19       Impact factor: 4.566

Review 6.  Current Understanding of the Biomechanics of Ventricular Tissues in Heart Failure.

Authors:  Wenqiang Liu; Zhijie Wang
Journal:  Bioengineering (Basel)       Date:  2019-12-20

7.  Cardiac motion estimation from medical images: a regularisation framework applied on pairwise image registration displacement fields.

Authors:  Hadi Wiputra; Wei Xuan Chan; Yoke Yin Foo; Sheldon Ho; Choon Hwai Yap
Journal:  Sci Rep       Date:  2020-10-28       Impact factor: 4.379

8.  Computational quantification of patient-specific changes in ventricular dynamics associated with pulmonary hypertension.

Authors:  Henrik Finsberg; Ce Xi; Xiaodan Zhao; Ju Le Tan; Martin Genet; Joakim Sundnes; Lik Chuan Lee; Liang Zhong; Samuel T Wall
Journal:  Am J Physiol Heart Circ Physiol       Date:  2019-11-01       Impact factor: 4.733

  8 in total

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