Literature DB >> 30170409

Hyper expression of MTBP may be an adverse signal for the survival of some malignant tumors: A data-based analysis and clinical observation.

Yantao Mao1, Mei Tian, Bo Pan, Qingshan Zhu, Paiyun Li, Hongmei Liu, Weipeng Liu, Ningtao Dai, Lili Yu, Yuan Tian.   

Abstract

To explore the relationship between mouse double minute 2 binding protein (MTBP) and the prognosis of cancer patients, a databank-based reanalysis was conducted and a clinical observation about lung adenocarcinoma was taken to verify the result of data analysis.We reanalyzed all the downloaded data in order to make a conclusion about the relationship between MTBP and the prognosis of cancer patients. At last, we collected 112 lung cancer patients with MTBP information to verify the results of data analysis (GSE30219).The overall Kaplan-Meier curve results of 6 eligible data groups were shown in Fig. 1. The Kaplan-Meier curve result of GSE16011 was shown in Fig. 1A (concordance index = 59.48, Log-Rank Equal Curves [P = 5.942e-05], R = 0.045/1, risk groups hazard ratio = 1.69 [conf. int. 1.3-2.9], P = 7.344e-05), while the stratification results were displayed independently in Figs. 2 and 3. The similar results could be seen in other 5 data groups. The tissue sections of 112 patients with lung adenocarcinoma were collected and immunohistochemically stained. The hyper expression rate of MTBP in adenocarcinoma was 23.21% (26/112). The results showed that patients with hyper expression of MTBP had significantly worse prognosis than the control group, and the survival curves were clearly separated from each other (Fig. 4B, P = .000).Hyper expression of MTBP maybe an adverse event for the survival of some cancer patients, especially in glioblastoma, kidney cancer, and lung cancer patients, which has been verified in 112 lung cancer patients with MTBP status.

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Year:  2018        PMID: 30170409      PMCID: PMC6392579          DOI: 10.1097/MD.0000000000012021

Source DB:  PubMed          Journal:  Medicine (Baltimore)        ISSN: 0025-7974            Impact factor:   1.817


Introduction

Mouse double minute 2 (MDM2) binding protein (MTBP) is a protein, which interacts with oncoprotein murine double minute (MDM2), located in chr8:120445426-120523635, confirmed by in situ hybridization,[ a major inhibitor of the tumor suppressor p53. It is reported to play a vital role in the regulation of the G(1) checkpoint of the cell cycle through its interaction with p53. p53-independent cell proliferation can be arrested by the expression level of MTBP, which is in turn blocked by simultaneous overexpression of MDM2.[ Furthermore, MTBP may have some effects on tumor metastasis in mice and upregulate migratory potential of mouse embryonic fibroblasts regardless of the presence of p53.[ With the development of science, more and more results showed that MTBP had p53-independent roles in tumorigenesis. Overexpression of MTBP is associated with poor prognosis of cancer patients.[ Cordon-Cardo et al reported that soft tissue sarcoma and bladder cancer patients with tumors having both mutant p53 and overexpression of MTBP had a worse prognosis than those patients with tumors just harboring p53 mutations,[ confirming that MDM2 played a p53-independent role in tumor development. Agarwal et al established an orthotopic tumor cell transplantation assay using osteosarcoma cells to indicate that MTBP suppresses cell migration and filopodia formation by inhibiting actinin-4 (ACTN4), which enhanced the understanding of MTBP in suppression of tumorigenesis and metastasis.[ In breast cancer specimens, overexpression of both MYC and MTBP was associated with a worse prognosis in 10-year survival of patients compared with MYC overexpression alone. MTBP was also frequently co-amplified with MYC in many human cancers. Mechanistic investigations implicated associations with TIP48/TIP49 as well as MYC in MTBP function in cellular transformation and the growth of human breast cancer cells. It means that MTBP functions with MYC to promote malignancy, identifying this protein as a novel general therapeutic target in human cancer. In a word, oncogenic protein MTBP interacts with MYC to promote tumorigenesis.[ In hepatocellular carcinoma, MTBP was reported to inhibit migration and metastasis.[ Thus, increasing evidence indicates the significance of MTBP in tumor progression. However, the relationship between MTBP and cancer patients was still poorly understood, especially in clinical practice. In order to conclude the role of MTBP among cancer patients, we downloaded the published data and made further analysis with the help of some online tools and data analysis software, then we collected histopathological sections of lung adenocarcinoma patients and performed immunohistochemical staining to further verify whether the results of the data analysis (GSE30219 and LUAD-TCGA) were correct.

Materials and methods

Data collection

We collected all the data mainly from International Cancer Genome Consortium, The Cancer Genome Atlas (TCGA), and Gene Expression Omnibus (GEO), selecting keywords related to MTBP, cancer, and gene expression technologies. For TCGA, all data were downloaded at the gene level (level 3). RNA-Seq counts data were log2 transformed. The characteristics of all the available downloaded data were displayed in Table 1 . A total of 112 lung adenocarcinoma tissue specimens and adjacent normal tissues were randomly collected from patients who received surgery for lung cancer at the Department of Cardiothoracic Surgery of An Yang Hospital of HeNan Province from January 2016 to February 2017 with the permission of Ethics Committee of our hospital. All the patients had not been treated with radiotherapy and chemotherapy before surgery. All tissues were histologically identified as adenocarcinoma, evaluated by 2 senior pathologists. Then, we took immunohistochemistry to make sure the expression status of MTBP protein.
Table 1

Characteristics and preliminary analysis results of all data.

Characteristics and preliminary analysis results of all data. Characteristics and preliminary analysis results of all data.

Immunohistochemistry and evaluation of staining intensity

Formalin-fixed, paraffin-embedded tissues were cut into 4-μm-thick slices, and were dewaxed in xylene, rehydrated, and graded ethanol solutions. Then, slices (4-μm thick) were used for immunohistochemistry with a monoclonal anti-MTBP antibody (1:500 dilution, Abcam, Cambridge, UK). Antigens, heating the histopathological sections at 100°C for 35 minutes in citrate solution (10 mmol/L, pH 6.0), were reclaimed. Then sections were cooled and immersed in methanol in the presence of 0.3% hydrogen peroxide for 15 minutes to block the endogenous peroxidase activity, subsequently rinsed in phosphate buffer saline (PBS) for 5 minutes, according to the immunohistochemistry kit. PBS was taken as negative controls instead of the primary antibody. The sections were then incubated with horseradish peroxidase-labeled goat against mouse/rabbit secondary antibody (Abcam). Diaminobenzene was adopted as the chromogen and hematoxylin as the nuclear counterstain. At last, slices were taken to be dehydrated, cleared, and mounted. All of the staining was evaluated independently by 2 senior pathologists. In 10 randomly selected fields, the intensity of MTBP immunochemical staining and the percentage of stained cells were assessed. Intensity of expression was examined based on the MTBP immunopositivity of normal pneumocyte. Intensity of immunopositivity was classified as negative (absent; score 0), weak (decreased intensity, compared with normal pneumocytes; score 1), moderate (the same intensity as MTBP expression of normal pneumocytes; score 2), and strong (increased intensity, compared with MTBP expression of normal pneumocytes; score 3). Score 3 was defined as over-expression of MTBP.

Statistical analysis

We analyzed all the data with the help of online tools as bc-GeneExMiner, GOBO, PrognoScan, ITTACA, KMPlot, Recurrence Online, Stata, and SurvExpress. SPSS 19.0 software was used for clinical data statistical analysis. The relation between the MTBP in tumor specimens and other patient characteristics was examined with Pearson chi-squared test. Overall survival was calculated from the onset of initial diagnosis to the observation deadline or death. The log-rank test was taken to evaluate survival time for different groups. P values of clinical information shown are 2-sided, and P < .05 was considered statistically significant. Prognostic index (PI) and Harrell's concordance index (CI) were taken to evaluate for all the downloaded data by Stata and R programming technology.[ Harrell's CI (C index) was used to assess the discriminating ability of the different PIs. We adopt a means to identify the risk groups splitting the ordered PI (higher values corresponding to higher risk) and then let the same number of samples in each group mark the number of risk groups. If there are 2 risk groups, we will set the PI to the median. Another method of delineating risk groups is to adopt an optimization algorithm for the ordered PI. If there are 2 groups, the log-rank test will be performed along all values of the arranged PI. Then, the minimum P value is considered as the segmentation point for the algorithm, which was mentioned by Deguo Xu in his paper.[ This procedure is applicable to more than 2 groups, and a risk group is repeatedly optimized until no changes are found. All risk evaluation processes can be easily finished with online analysis tools, SPSS 19.0 software or Stata software.[ In this survival analysis, the hazard ratio (HR) is the risk ratio of the terms stated by 2 levels of risk groups. Survival rate was plotted using Kaplan–Meier method and analyzed by using log-rank test method. The frequencies of categorical variables were compared using Pearson chi-squared or Fisher exact test, when appropriate. A value of P < .01 was considered to be statistical significant.

Results

Eleven thousand nine hundred seventy-three subjects with MTBP status information from 34 data groups, were shown and marked in Table 1 , whereas 22 included data which just displayed without MTBP information. In order to reveal the relationship between MTBP and the survival of cancer patients, we analyzed all the data with survival information first. We tried our best to perform Kaplan–Meier survival curve for risk groups, CI, and P value of the log-rank testing equality of survival curves in every database with MTBP information, as recommended by Bovelstad and Borgan.[ Among all the results, green color represents low-risk groups and red color means high-risk groups. Of 34 data groups, 6 showed the statistical significant P value, which were marked in Table 1 . Kaplan–Meier survival curves of 6 risk groups can be seen in Fig. 1. We conclude form the preliminary results that hyper expression of MTBP may be associated with the worse prognosis of glioblastoma, kidney cancer, and lung cancer patients.
Figure 1

Kaplan–Meier survival curve for 6 risk groups, concordance index (CI), and P value of the log-rank testing equality of survival curves in every database. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Kaplan–Meier survival curve for Glioblastoma GSE16011. (B) Kaplan–Meier survival curve for GBMLGG-TCGA Gliomas. (C) Kaplan–Meier survival curve for LGG-TCGA—low-grade gliomas. (D) Kaplan–Meier survival curve for KIPAN-TCGA—kidney cancer. (E) Kaplan–Meier survival curve for LUAD-TCGA—lung adenocarcinoma. (F) Kaplan–Meier survival curve for Rousseaux GSE30219—lung cancer.

Kaplan–Meier survival curve for 6 risk groups, concordance index (CI), and P value of the log-rank testing equality of survival curves in every database. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Kaplan–Meier survival curve for Glioblastoma GSE16011. (B) Kaplan–Meier survival curve for GBMLGG-TCGA Gliomas. (C) Kaplan–Meier survival curve for LGG-TCGA—low-grade gliomas. (D) Kaplan–Meier survival curve for KIPAN-TCGA—kidney cancer. (E) Kaplan–Meier survival curve for LUAD-TCGA—lung adenocarcinoma. (F) Kaplan–Meier survival curve for Rousseaux GSE30219—lung cancer. The stratification analysis of GSE16011 was made according to survival, histology, grade, therapy, gender, and age of the tumor data. The overall Kaplan–Meier curve result was shown in Fig. 1A (CI = 59.48, Log-Rank Equal Curves [P = 5.942e−05], R2 = 0.045/1, risk groups HR = 1.69 [conf. int. 1.3–2.9], P = 7.344e−05), while the stratification results were displayed independently in Figs. 2 and 3 . Figure 2A showed clinical information available related to risk group, PI, and outcome data, while a box plot across risk groups, including the P value testing for difference using t test was shown in Fig. 2C. The process of risk group optimization was displayed in Fig. 2B. The Log-Rank Equal Curves were obviously separated from each other in Fig. 2E (CI = 61.27, Log-Rank Equal Curves [P = .0005411], R2 = 0.059/0.998, risk groups HR = 2.21 [conf. int. 1.39–3.49], P = .0007378) compared with Fig. 2D and F, when all the patients were grouped by gender. Then, the data of GSE16011 were taken into stratification by tumor grade and surgery. The results were gathered in Fig. 3 . Log-Rank Equal Curves were shown in separated trend just in Fig. 3 C, stratified by grade, while all the results were of no statistical significance. In the subgroup of partial resection, shown in Fig. 3 F, Log-Rank Equal Curves were separated obvious from each other (CI = 59.62, Log-Rank Equal Curves [P = 5.408e−05], R2 = 0.052/0.999, risk groups HR = 2.07 [conf. int. 1.44–2.97], P = 7.671e−05), when the subgroups were divided by surgery type.
Figure 2

Kaplan–Meier survival curves and performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Clinical information available related to risk group, prognostic index, and outcome data. (B) The censored process of risk group optimization by prognostic index. (C) Box plot across risk groups, including the P value testing for difference using t test (or f-test for more than 2 groups). The ordinate (Y-axis) indicates the expression percentage of the gene, the abscissa (X-axis) represents different risk groups. (D) Performance of stratification analysis for original groups by class: gender (no covariate fitting). (E) Performance of stratification analysis by gender = female. (F) Performance of stratification analysis by gender = male. CI = concordance index.

Figure 3

Performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Performance of stratification analysis for original groups by class: histology-grade (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by grade 1. (C) Kaplan–Meier curves and performance of stratification analysis by grade 3. (D) Kaplan–Meier curves and performance of stratification analysis by grade 4. (E) Kaplan–Meier curves and performance of stratification analysis for original groups by class: surgery (no covariate fitting). (F) Kaplan–Meier curves and performance of stratification analysis by partial resection. (G) Kaplan–Meier curves and performance of stratification analysis by stereotactic biopsy. (H) Kaplan–Meier curves and performance of stratification analysis by complete resection. CI = concordance index.

Kaplan–Meier survival curves and performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Clinical information available related to risk group, prognostic index, and outcome data. (B) The censored process of risk group optimization by prognostic index. (C) Box plot across risk groups, including the P value testing for difference using t test (or f-test for more than 2 groups). The ordinate (Y-axis) indicates the expression percentage of the gene, the abscissa (X-axis) represents different risk groups. (D) Performance of stratification analysis for original groups by class: gender (no covariate fitting). (E) Performance of stratification analysis by gender = female. (F) Performance of stratification analysis by gender = male. CI = concordance index. Performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Performance of stratification analysis for original groups by class: histology-grade (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by grade 1. (C) Kaplan–Meier curves and performance of stratification analysis by grade 3. (D) Kaplan–Meier curves and performance of stratification analysis by grade 4. (E) Kaplan–Meier curves and performance of stratification analysis for original groups by class: surgery (no covariate fitting). (F) Kaplan–Meier curves and performance of stratification analysis by partial resection. (G) Kaplan–Meier curves and performance of stratification analysis by stereotactic biopsy. (H) Kaplan–Meier curves and performance of stratification analysis by complete resection. CI = concordance index. Performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Performance of stratification analysis for original groups by class: histology-grade (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by grade 1. (C) Kaplan–Meier curves and performance of stratification analysis by grade 3. (D) Kaplan–Meier curves and performance of stratification analysis by grade 4. (E) Kaplan–Meier curves and performance of stratification analysis for original groups by class: surgery (no covariate fitting). (F) Kaplan–Meier curves and performance of stratification analysis by partial resection. (G) Kaplan–Meier curves and performance of stratification analysis by stereotactic biopsy. (H) Kaplan–Meier curves and performance of stratification analysis by complete resection. CI = concordance index. Similar stratification of GSE30219, relating to lung cancer, was put into practice by stage of adenocarcinoma. The overall Log-Rank Equal Curve was exhibited in Fig. 1F (CI = 62.47, Log-Rank Equal Curves [P = 1.189e−05], R2 = 0.063/0.998, risk groups HR = 1.99 [conf. int. 1.45–2.73], P = 1.745e−05), while the details of the stratification results were provided in Fig. 4. The Log-Rank Equal Curves were obviously separated from each other in Fig. 4B (CI = 62.05, Log-Rank Equal Curves [P = .000419, R2 = 0.051/0.993, risk groups HR = 2.02 [conf. int. 1.36–3.00], P = .000544) compared with others.
Figure 3 (Continued)

Performance of stratification analysis in Glioblastoma GSE16011 according to tumor grade and surgical approach. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Performance of stratification analysis for original groups by class: histology-grade (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by grade 1. (C) Kaplan–Meier curves and performance of stratification analysis by grade 3. (D) Kaplan–Meier curves and performance of stratification analysis by grade 4. (E) Kaplan–Meier curves and performance of stratification analysis for original groups by class: surgery (no covariate fitting). (F) Kaplan–Meier curves and performance of stratification analysis by partial resection. (G) Kaplan–Meier curves and performance of stratification analysis by stereotactic biopsy. (H) Kaplan–Meier curves and performance of stratification analysis by complete resection. CI = concordance index.

Performance of stratification analysis for Rousseaux GSE30219. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Kaplan–Meier survival curves and performance of stratification analysis for original groups by Class: stage (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by Class: stage = I. (C) Kaplan–Meier curves and performance of stratification analysis for original groups by Class: stage = II. (D) Kaplan–Meier curves and performance of stratification analysis by Class: stage = III. CI = concordance index. All the above results are just concluded from data analysis. In order to verify the authenticity and correctness of the above results, especially in GSE30219, we retrospectively collected 112 cases of lung adenocarcinoma patients for further clinical validation. Patient characteristics were gathered in Table 2. Expression status of MTBP gene was determined by immunohistochemistry. The results of immunohistochemical staining for pathological tissue sections of lung cancer were shown in Fig. 5, including normal tissue (Fig. 5A and B) and adenocarcinoma tissue (Fig. 5C–E). The overexpression status of MTBP gene was displayed in Fig. 5E, marked as (+++). Overall, 49 patients were female and 63 were male. Twenty-six patients were shown to be associated with hyper expression of MTBP protein. The hyper expression rate of MTBP was obvious higher in the subgroup of ECOG, stage and pleural effusion, which the P value of them were of statistical significance. Then, the survival analysis of 112 lung adenocarcinoma patients was put into practice. Clinical tumor stage, overexpression of MTBP, and malignant pleural effusion, shown in Fig. 6A–C, are factors that have the most significant influence on the prognosis of patients. The Kaplan–Meier survival cures were obviously separated from each other, which the results of Fig. 6B are similar to the results of data group GSE30219. Patients receiving treatment had a better prognosis than patients who had not received any treatment (Fig. 6D), while the differences among 3 treatment approaches, compared in pairs, were of no obvious significance (P = .305/.457/.957).
Table 1 (Continued)

Characteristics and preliminary analysis results of all data.

Figure 4

Performance of stratification analysis for Rousseaux GSE30219. Red and green curves denote high- and low-risk groups, respectively. The ordinal (Y-axis) indicates the percentage of survival, the abscissa (X-axis) represents survival days, and the number of survivors at the corresponding time. Censoring samples are shown as “+” marks. The number of individuals, the number of censored, and the CI of each risk group are shown in the top-right insets. (A) Kaplan–Meier survival curves and performance of stratification analysis for original groups by Class: stage (no covariate fitting). (B) Kaplan–Meier curves and performance of stratification analysis by Class: stage = I. (C) Kaplan–Meier curves and performance of stratification analysis for original groups by Class: stage = II. (D) Kaplan–Meier curves and performance of stratification analysis by Class: stage = III. CI = concordance index.

Figure 5

Immunohistochemical staining results of normal and adenocarcinoma tissues. (A, B) Immunohistochemistry results of normal tissue. (C) Immunohistochemical staining results of adenocarcinoma tissues, marked as (+). (D) Immunohistochemical staining results of adenocarcinoma tissues, marked as (++). (E) Immunohistochemical staining results of adenocarcinoma tissues, marked as (+++), which was defined for hyper expression or over expression of mouse double minute 2 binding protein.

Clinical characteristics of 112 patients with lung cancer. Immunohistochemical staining results of normal and adenocarcinoma tissues. (A, B) Immunohistochemistry results of normal tissue. (C) Immunohistochemical staining results of adenocarcinoma tissues, marked as (+). (D) Immunohistochemical staining results of adenocarcinoma tissues, marked as (++). (E) Immunohistochemical staining results of adenocarcinoma tissues, marked as (+++), which was defined for hyper expression or over expression of mouse double minute 2 binding protein. Kaplan–Meier curves and performance of stratification analysis for 112 lung cancer patients. (A) Kaplan–Meier curves for original groups by stage. (B) Kaplan–Meier curves of analysis by status of mouse double minute 2 binding protein. (C) Kaplan–Meier curves of analysis by status of pleural effusion. (D) Kaplan–Meier curves and performance of stratification analysis by treatment methods.

Discussion

As is known to all, Glioblastoma multiforme (GBM) is an aggressive, invasive brain tumor with poor prognosis.[ Although, surgical resection and chemoradiotherapy are taken to deal with GBM, 5-year survival rate is no more than 5% after initial diagnosis.[ Conventional chemotherapy shows lower survival benefits in GBM patients because of poor blood–brain barrier penetration, tumor heterogeneity, intrinsic resistance, and nonspecific toxicity.[ A lot of clinical trials were carried out in the past years, but the survival of patients had been improved little.[ A lot of factors are thought to be associated with the development of gliomas, but the pathogenesis of gliomas is still to be further studied.[ Therefore, plenty of further researches are urgently required to find out novel therapeutic targets and develop more effective combination strategies for GBM treatment. MTBP is a protein, which interacts with oncoprotein murine double minute (MDM2), a major inhibitor of the tumor suppressor p53.[ It was reported to be associated with cancer in some mechanism research,[ scarcely involved in clinical trials. With the development of whole genome sequencing, more and more scientific problems related to pathogenic genes can be elucidated.[ However, the expenditure of sequencing is too high to be widely used for every research team. So, we change the perspective of our study instead of sequencing. Plenty of data about MTBP related to cancers can be downloaded online, such as TCGA, GEO, and so on. We reanalyzed the downloaded data (17,517 samples) to make sure the relationship between the level of MTBP expression and the survival of cancer patients. The overall Log-Rank Equal Curves were obvious separated from each other in 6 data groups, especially in glioblastoma patients (involved 1396 samples), which P values of them were all of statistical significance. The detail of the results can be seen in Fig. 1. Therefore, we can conclude from the preliminary result that MTBP gene may be an adverse signal for the survival of glioblastoma, kidney cancer, and lung adenocarcinoma cancer patients. GBM could be divided into mesenchymal, classical, neural, and proneural subtypes according to a gene expression-based molecular classification system, created by TCGA.[ Three signaling pathways are frequently reported in GBM: receptor tyrosine kinase (RTK)/Ras/phosphoinositide 3-kinase (PI3K), p53, and retinoblastoma (Rb) signaling. These have led to a better understanding of the molecular mechanism of GBM and have revealed numerous important changes in genes and pathways,[ scarcely involved MTBP. MTBP is a major inhibitor of the tumor suppressor p53.[ It may show its effects on GBM through p53 signal pathway. In order to get more information about MTBP, we put the data of GSE16011 into stratification. The results were gathered in Figs. 2 and 3 . Furthermore, some of the results, listed in Figs. 2E and 3F , supported our hypothesis that overexpression of MTBP is an adverse signal for the survival of glioblastoma patients. Every year, there are almost 270,000 patients suffering from kidney cancer leading to 11,500 deaths.[ A lot of genes linked with kidney cancer, such as VHL, MET, FLCN, TSC1, TSC2, NOD2, and TFE3,[ were identified by genome researches and have significantly changed the ways in which patients with kidney cancer are treated. The VHL pathway had been admitted for the therapy of patients with advanced kidney cancer. More new genome researches, such as whole genome sequencing, gene expression patterns, and so on, will still be needed to carried out to get a complete understanding of the genetic basic mechanism of kidney cancer and the kidney cancer gene pathways and, most importantly, to provide the foundation for the development of effective forms of therapy for patients with the disease.[ The Log-Rank Equal Curve of KIPAN, displayed in Fig. 1D, revealed that expression of MTBP is bad for the survival of kidney patients, which may provide useful guidance for kidney cancer treatments in the future. MTBP may be a new therapy target for kidney cancer patients, though plenty of researches are still needed to elucidate the mechanism between MTBP and the prognosis of kidney cancers. There are plenty of genes or RNA involved in the tumorigenesis of lung cancer, including PD-1, K-RAS, EGFR, VEGF, BRAF, ERK-2, which promotes the development of lung cancer treatments.[ However, it is the first time for the relationship between MTBP expression and the survival of lung cancer patients to be revealed by reanalysis of online sequencing data, shown in Fig. 1F (CI = 62.47, Log-Rank Equal Curves [P = 1.189e−05], R2 = 0.063/0.998, risk groups HR = 1.99 [conf. int. 1.45–2.73], P = 1.745e−05). It confirmed the relationship between MTBP expression and the survival of lung cancer patients, and displayed that overexpression of MTBP is an adverse event for the prognosis of patients. The stratification of GSE30219 was carried out according to stage and histology of the tumor, which revealed that the Log-Rank Equal Curves were separated from each other in subgroup of adenocarcinoma and stage I, listed in Fig. 4. The above results are picked up only from simple data analysis, and the authenticity and credibility are still to be verified. Therefore, we selected 112 cases of lung adenocarcinoma patients clinical pathological sections for immunohistochemical staining, to further verify the reality of the above conclusions. Patient characteristics were summarized in Table 2. Clinical tumor stage, overexpression of MTBP, and malignant pleural effusion, shown in Fig. 6A–C, are factors that have significant influence on the prognosis of patients, which the results of Fig. 5B are consistent with the results of data group GSE30219. It was further confirmed that MTBP gene hyper expression is unfavorable to the prognosis of lung adenocarcinoma cancer patients. Every year, the College of American Pathologists, the International Association for the Study of Lung Cancer, and the Association for Molecular Pathology will update their recommendations for molecular testing for the selection of patients with lung cancer for treatment with targeted tyrosine kinase inhibitors.[ EGFR status is always listed as the first recommended test. It means that effective biological predictors, such as EGFR, ROS-1, ALK, and so on, are extremely important for evaluating the prognosis of cancer patients.[ Through the above data analysis results and some clinical validation results, we can infer that MTBP, similar to EGFR, may become an indicator to evaluate the prognosis of cancer in the future, especially in lung adenocarcinoma cancer patients. More basic research on MTBP gene and clinical validation trials need to be invested in order to further clarify the role of MTBP in the development, progression, and prognosis of cancer.

Conclusions

We can conclude that hyper expression of MTBP is an adverse event for the survival of glioblastoma, kidney cancer, and lung cancer patients, which has been clinically verified in lung cancer.

Ethical approval

We declared that all procedures involved in this study about human participants were in accordance with the ethical standards of the institutional and/or national research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. For this type of study formal consent is not required.

Author contributions

Yuan Tian was responsible for the final decision to submit for publication or others. Yantao Mao and Mei Tian had the full data of the paper. Bo Pan helped to gather data and write the report. Lili Yu and Hongmei Liu helped with study design, data collection. Data curation: Mei Tian, Qingshan Zhu, Hongmei Liu, Weipeng Liu, Ningtao Dai, Lili Yu. Formal analysis: Yantao Mao, Bo Pan, Qingshan Zhu, Hongmei Liu, Weipeng Liu, Ningtao Dai, Yuan Tian. Funding acquisition: Yuan Tian. Project administration: Yuan Tian. Resources: Paiyun Li, Lili Yu. Software: Paiyun Li, Weipeng Liu. Writing – original draft: Yuan Tian. Writing – review & editing: Mei Tian, Ningtao Dai.
Table 2

Clinical characteristics of 112 patients with lung cancer.

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Journal:  Clin Cancer Res       Date:  2002-01       Impact factor: 12.531

2.  Molecular Testing Guideline for the Selection of Patients With Lung Cancer for Treatment With Targeted Tyrosine Kinase Inhibitors: American Society of Clinical Oncology Endorsement of the College of American Pathologists/International Association for the Study of Lung Cancer/Association for Molecular Pathology Clinical Practice Guideline Update.

Authors:  Gregory P Kalemkerian; Navneet Narula; Erin B Kennedy; William A Biermann; Jessica Donington; Natasha B Leighl; Madelyn Lew; James Pantelas; Suresh S Ramalingam; Martin Reck; Anjali Saqi; Michael Simoff; Navneet Singh; Baskaran Sundaram
Journal:  J Clin Oncol       Date:  2018-02-05       Impact factor: 44.544

3.  The concordance index C and the Mann-Whitney parameter Pr(X>Y) with randomly censored data.

Authors:  James A Koziol; Zhenyu Jia
Journal:  Biom J       Date:  2009-06       Impact factor: 2.207

4.  Corrigendum: Comprehensive genomic characterization defines human glioblastoma genes and core pathways.

Authors:  The Cancer Genome Atlas Research Network
Journal:  Nature       Date:  2013-02-06       Impact factor: 49.962

5.  CBTRUS statistical report: primary brain and central nervous system tumors diagnosed in the United States in 2007-2011.

Authors:  Quinn T Ostrom; Haley Gittleman; Peter Liao; Chaturia Rouse; Yanwen Chen; Jacqueline Dowling; Yingli Wolinsky; Carol Kruchko; Jill Barnholtz-Sloan
Journal:  Neuro Oncol       Date:  2014-10       Impact factor: 12.300

6.  Molecular abnormalities of mdm2 and p53 genes in adult soft tissue sarcomas.

Authors:  C Cordon-Cardo; E Latres; M Drobnjak; M R Oliva; D Pollack; J M Woodruff; V Marechal; J Chen; M F Brennan; A J Levine
Journal:  Cancer Res       Date:  1994-02-01       Impact factor: 12.701

7.  The evolutionary history of lethal metastatic prostate cancer.

Authors:  Christopher Foster; Douglas Easton; Ultan McDermott; David C Wedge; G Steven Bova; Gunes Gundem; Peter Van Loo; Barbara Kremeyer; Ludmil B Alexandrov; Jose M C Tubio; Elli Papaemmanuil; Daniel S Brewer; Heini M L Kallio; Gunilla Högnäs; Matti Annala; Kati Kivinummi; Victoria Goody; Calli Latimer; Sarah O'Meara; Kevin J Dawson; William Isaacs; Michael R Emmert-Buck; Matti Nykter; Zsofia Kote-Jarai; Hayley C Whitaker; David E Neal; Colin S Cooper; Rosalind A Eeles; Tapio Visakorpi; Peter J Campbell
Journal:  Nature       Date:  2015-04-01       Impact factor: 49.962

8.  MTBP suppresses cell migration and filopodia formation by inhibiting ACTN4.

Authors:  N Agarwal; A S Adhikari; S V Iyer; K Hekmatdoost; D R Welch; T Iwakuma
Journal:  Oncogene       Date:  2012-02-27       Impact factor: 9.867

9.  Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity.

Authors:  Kristen M Turner; Viraj Deshpande; Doruk Beyter; Tomoyuki Koga; Jessica Rusert; Catherine Lee; Bin Li; Karen Arden; Bing Ren; David A Nathanson; Harley I Kornblum; Michael D Taylor; Sharmeela Kaushal; Webster K Cavenee; Robert Wechsler-Reya; Frank B Furnari; Scott R Vandenberg; P Nagesh Rao; Geoffrey M Wahl; Vineet Bafna; Paul S Mischel
Journal:  Nature       Date:  2017-02-08       Impact factor: 49.962

10.  Cancer drug addiction is relayed by an ERK2-dependent phenotype switch.

Authors:  Xiangjun Kong; Thomas Kuilman; Aida Shahrabi; Julia Boshuizen; Kristel Kemper; Ji-Ying Song; Hans W M Niessen; Elisa A Rozeman; Marnix H Geukes Foppen; Christian U Blank; Daniel S Peeper
Journal:  Nature       Date:  2017-10-04       Impact factor: 49.962

View more
  2 in total

1.  [MTBP regulates migration and invasion of prostate cancer cells in vitro].

Authors:  Zhuoyu Xiao; Mingkun Chen; Jiankun Yang; Cheng Yang; Xianyuan Lü; Hu Tian; Cundong Liu
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2019-01-30

Review 2.  MTBP and MYC: A Dynamic Duo in Proliferation, Cancer, and Aging.

Authors:  Brian C Grieb; Christine M Eischen
Journal:  Biology (Basel)       Date:  2022-06-08
  2 in total

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