Literature DB >> 30160938

Establishing a Cell-Free Vibrio natriegens Expression System.

Daniel J Wiegand1,2, Henry H Lee1, Nili Ostrov1, George M Church1,2.   

Abstract

The fast growing bacterium Vibrio natriegens is an emerging microbial host for biotechnology. Harnessing its productive cellular components may offer a compelling platform for rapid protein production and prototyping of metabolic pathways or genetic circuits. Here, we report the development of a V. natriegens cell-free expression system. We devised a simplified crude extract preparation protocol and achieved >260 μg/mL of superfolder GFP in a small-scale batch reaction after 3 h. Culturing conditions, including growth media and cell density, significantly affect translation kinetics and protein yield of extracts. We observed maximal protein yield at incubation temperatures of 26 or 30 °C, and show improved yield by tuning ions crucial for ribosomal stability. This work establishes an initial V. natriegens cell-free expression system, enables probing of V. natriegens biology, and will serve as a platform to accelerate metabolic engineering and synthetic biology applications.

Entities:  

Keywords:  TX-TL; Vibrio natriegens; cell-free system; crude cell extract; in vitro protein synthesis

Mesh:

Substances:

Year:  2018        PMID: 30160938     DOI: 10.1021/acssynbio.8b00222

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  12 in total

1.  Cell-free Protein Expression Using the Rapidly Growing Bacterium Vibrio natriegens.

Authors:  Daniel J Wiegand; Henry H Lee; Nili Ostrov; George M Church
Journal:  J Vis Exp       Date:  2019-03-14       Impact factor: 1.355

2.  Preparation and Screening of Cell-Free Extract from Nongrowing Escherichia coli A19 Cells.

Authors:  Florian Hiering; Jurek Failmezger; Martin Siemann-Herzberg
Journal:  Methods Mol Biol       Date:  2022

3.  Genome-Scale Modeling and Systems Metabolic Engineering of Vibrio natriegens for the Production of 1,3-Propanediol.

Authors:  Ye Zhang; Dehua Liu; Zhen Chen
Journal:  Methods Mol Biol       Date:  2023

4.  Complete Genome Sequences of Two Vibrio natriegens Bacteriophages.

Authors:  Meghan T Harris; Tereasa Ching Ho; Harry Fruchtman; Mira E Garin; Victor Kubatin; Tiger Lu; Lingyan Xue; Michael T Marr
Journal:  Microbiol Resour Announc       Date:  2020-11-05

5.  Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry.

Authors:  Adam D Silverman; Nancy Kelley-Loughnane; Julius B Lucks; Michael C Jewett
Journal:  ACS Synth Biol       Date:  2019-01-29       Impact factor: 5.110

6.  High-cell-density fed-batch cultivations of Vibrio natriegens.

Authors:  Isabel Thiele; Björn Gutschmann; Linus Aulich; Marcel Girard; Peter Neubauer; Sebastian L Riedel
Journal:  Biotechnol Lett       Date:  2021-05-19       Impact factor: 2.461

7.  Multiplex transcriptional characterizations across diverse bacterial species using cell-free systems.

Authors:  Sung Sun Yim; Nathan I Johns; Jimin Park; Antonio Lc Gomes; Ross M McBee; Miles Richardson; Carlotta Ronda; Sway P Chen; David Garenne; Vincent Noireaux; Harris H Wang
Journal:  Mol Syst Biol       Date:  2019-08       Impact factor: 11.429

Review 8.  Synthetic Biology Goes Cell-Free.

Authors:  Aidan Tinafar; Katariina Jaenes; Keith Pardee
Journal:  BMC Biol       Date:  2019-08-08       Impact factor: 7.431

9.  Generation of a Prophage-Free Variant of the Fast-Growing Bacterium Vibrio natriegens.

Authors:  Eugen Pfeifer; Slawomir Michniewski; Cornelia Gätgens; Eugenia Münch; Felix Müller; Tino Polen; Andrew Millard; Bastian Blombach; Julia Frunzke
Journal:  Appl Environ Microbiol       Date:  2019-08-14       Impact factor: 4.792

10.  Development and comparison of cell-free protein synthesis systems derived from typical bacterial chassis.

Authors:  Liyuan Zhang; Xiaomei Lin; Ting Wang; Wei Guo; Yuan Lu
Journal:  Bioresour Bioprocess       Date:  2021-07-06
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