Literature DB >> 30146315

Tma64/eIF2D, Tma20/MCT-1, and Tma22/DENR Recycle Post-termination 40S Subunits In Vivo.

David J Young1, Desislava S Makeeva2, Fan Zhang3, Aleksandra S Anisimova4, Elena A Stolboushkina5, Fardin Ghobakhlou3, Ivan N Shatsky6, Sergey E Dmitriev7, Alan G Hinnebusch8, Nicholas R Guydosh9.   

Abstract

The recycling of ribosomal subunits after translation termination is critical for efficient gene expression. Tma64 (eIF2D), Tma20 (MCT-1), and Tma22 (DENR) function as 40S recycling factors in vitro, but it is unknown whether they perform this function in vivo. Ribosome profiling of tma deletion strains revealed 80S ribosomes queued behind the stop codon, consistent with a block in 40S recycling. We found that unrecycled ribosomes could reinitiate translation at AUG codons in the 3' UTR, as evidenced by peaks in the footprint data and 3' UTR reporter analysis. In vitro translation experiments using reporter mRNAs containing upstream open reading frames (uORFs) further established that reinitiation increased in the absence of these proteins. In some cases, 40S ribosomes appeared to rejoin with 60S subunits and undergo an 80S reinitiation process in 3' UTRs. These results support a crucial role for Tma64, Tma20, and Tma22 in recycling 40S ribosomal subunits at stop codons and translation reinitiation. Published by Elsevier Inc.

Entities:  

Keywords:  3′ UTR; MCTS1; eIF1; ligatin; reinitiation; ribosome profiling; ribosome recycling; translation; uORF

Mesh:

Substances:

Year:  2018        PMID: 30146315      PMCID: PMC6225905          DOI: 10.1016/j.molcel.2018.07.028

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  47 in total

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Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

2.  Multiple upstream AUG codons mediate translational control of GCN4.

Authors:  P P Mueller; A G Hinnebusch
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

3.  Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.

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Journal:  Cell Rep       Date:  2017-03-14       Impact factor: 9.423

4.  Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae.

Authors:  D C Schwartz; R Parker
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

5.  Activities of Ligatin and MCT-1/DENR in eukaryotic translation initiation and ribosomal recycling.

Authors:  Maxim A Skabkin; Olga V Skabkina; Vidya Dhote; Anton A Komar; Christopher U T Hellen; Tatyana V Pestova
Journal:  Genes Dev       Date:  2010-08-15       Impact factor: 11.361

6.  Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.

Authors:  Sergey E Dmitriev; Dmitri E Andreev; Ilya M Terenin; Ivan A Olovnikov; Vladimir S Prassolov; William C Merrick; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

Review 7.  The scanning mechanism of eukaryotic translation initiation.

Authors:  Alan G Hinnebusch
Journal:  Annu Rev Biochem       Date:  2014-01-29       Impact factor: 23.643

8.  Requirements for intercistronic distance and level of eukaryotic initiation factor 2 activity in reinitiation on GCN4 mRNA vary with the downstream cistron.

Authors:  C M Grant; P F Miller; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1994-04       Impact factor: 4.272

9.  De Novo Mutations in DENR Disrupt Neuronal Development and Link Congenital Neurological Disorders to Faulty mRNA Translation Re-initiation.

Authors:  Matilda A Haas; Linh Ngo; Shan Shan Li; Sibylle Schleich; Zhengdong Qu; Hannah K Vanyai; Hayley D Cullen; Aida Cardona-Alberich; Ivan E Gladwyn-Ng; Alistair T Pagnamenta; Jenny C Taylor; Helen Stewart; Usha Kini; Kent E Duncan; Aurelio A Teleman; David A Keays; Julian I-T Heng
Journal:  Cell Rep       Date:  2016-05-26       Impact factor: 9.423

Review 10.  Pushing the limits of the scanning mechanism for initiation of translation.

Authors:  Marilyn Kozak
Journal:  Gene       Date:  2002-10-16       Impact factor: 3.688

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  26 in total

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Authors:  Hung-Hsi Chen; Woan-Yuh Tarn
Journal:  RNA Biol       Date:  2019-06-24       Impact factor: 4.652

2.  Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs.

Authors:  Swati Gaikwad; Fardin Ghobakhlou; David J Young; Jyothsna Visweswaraiah; Hongen Zhang; Alan G Hinnebusch
Journal:  Elife       Date:  2021-03-25       Impact factor: 8.140

3.  Assessing Ribosome Distribution Along Transcripts with Polarity Scores and Regression Slope Estimates.

Authors:  Ilya E Vorontsov; Artyom A Egorov; Aleksandra S Anisimova; Irina A Eliseeva; Vsevolod J Makeev; Vadim N Gladyshev; Sergey E Dmitriev; Ivan V Kulakovskiy
Journal:  Methods Mol Biol       Date:  2021

4.  Activation of the antiviral factor RNase L triggers translation of non-coding mRNA sequences.

Authors:  Agnes Karasik; Grant D Jones; Andrew V DePass; Nicholas R Guydosh
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

5.  Disome and Trisome Profiling Reveal Genome-wide Targets of Ribosome Quality Control.

Authors:  Sezen Meydan; Nicholas R Guydosh
Journal:  Mol Cell       Date:  2020-07-01       Impact factor: 17.970

6.  Hcr1/eIF3j Is a 60S Ribosomal Subunit Recycling Accessory Factor In Vivo.

Authors:  David J Young; Nicholas R Guydosh
Journal:  Cell Rep       Date:  2019-07-02       Impact factor: 9.423

7.  Rebirth of the translational machinery: The importance of recycling ribosomes.

Authors:  David J Young; Nicholas R Guydosh
Journal:  Bioessays       Date:  2022-02-11       Impact factor: 4.653

8.  40S ribosome profiling reveals distinct roles for Tma20/Tma22 (MCT-1/DENR) and Tma64 (eIF2D) in 40S subunit recycling.

Authors:  David J Young; Sezen Meydan; Nicholas R Guydosh
Journal:  Nat Commun       Date:  2021-05-20       Impact factor: 14.919

9.  CTELS: A Cell-Free System for the Analysis of Translation Termination Rate.

Authors:  Kseniya A Lashkevich; Valeriya I Shlyk; Artem S Kushchenko; Vadim N Gladyshev; Elena Z Alkalaeva; Sergey E Dmitriev
Journal:  Biomolecules       Date:  2020-06-16

10.  Translation inhibitory elements from Hoxa3 and Hoxa11 mRNAs use uORFs for translation inhibition.

Authors:  Fatima Alghoul; Schaeffer Laure; Gilbert Eriani; Franck Martin
Journal:  Elife       Date:  2021-06-02       Impact factor: 8.140

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