Literature DB >> 30141251

To replicate, or not to replicate - that is the question: how to tackle nonlinear responses in ecological experiments.

Juergen Kreyling1, Andreas H Schweiger2, Michael Bahn3, Phil Ineson4, Mirco Migliavacca5, Thibaut Morel-Journel6, Jesper Riis Christiansen7, Nicolas Schtickzelle6, Klaus Steenberg Larsen7.   

Abstract

A fundamental challenge in experimental ecology is to capture nonlinearities of ecological responses to interacting environmental drivers. Here, we demonstrate that gradient designs outperform replicated designs for detecting and quantifying nonlinear responses. We report the results of (1) multiple computer simulations and (2) two purpose-designed empirical experiments. The findings consistently revealed that unreplicated sampling at a maximum number of sampling locations maximised prediction success (i.e. the R² to the known truth) irrespective of the amount of stochasticity and the underlying response surfaces, including combinations of two linear, unimodal or saturating drivers. For the two empirical experiments, the same pattern was found, with gradient designs outperforming replicated designs in revealing the response surfaces of underlying drivers. Our findings suggest that a move to gradient designs in ecological experiments could be a major step towards unravelling underlying response patterns to continuous and interacting environmental drivers in a feasible and statistically powerful way.
© 2018 John Wiley & Sons Ltd/CNRS.

Keywords:  Climate change experiments; experimental design; replication; residuals; stochasticity

Mesh:

Year:  2018        PMID: 30141251     DOI: 10.1111/ele.13134

Source DB:  PubMed          Journal:  Ecol Lett        ISSN: 1461-023X            Impact factor:   9.492


  13 in total

1.  Multiple constraints cause positive and negative feedbacks limiting grassland soil CO2 efflux under CO2 enrichment.

Authors:  Philip A Fay; Dafeng Hui; Robert B Jackson; Harold P Collins; Lara G Reichmann; Michael J Aspinwall; Virginia L Jin; Albina R Khasanova; Robert W Heckman; H Wayne Polley
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

2.  Towards a unified study of multiple stressors: divisions and common goals across research disciplines.

Authors:  James A Orr; Rolf D Vinebrooke; Michelle C Jackson; Kristy J Kroeker; Rebecca L Kordas; Chrystal Mantyka-Pringle; Paul J Van den Brink; Frederik De Laender; Robby Stoks; Martin Holmstrup; Christoph D Matthaei; Wendy A Monk; Marcin R Penk; Sebastian Leuzinger; Ralf B Schäfer; Jeremy J Piggott
Journal:  Proc Biol Sci       Date:  2020-05-06       Impact factor: 5.349

3.  Soil microbial community responses to climate extremes: resistance, resilience and transitions to alternative states.

Authors:  Richard D Bardgett; Tancredi Caruso
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-01-27       Impact factor: 6.237

4.  A meta-analysis of 1,119 manipulative experiments on terrestrial carbon-cycling responses to global change.

Authors:  Jian Song; Shiqiang Wan; Shilong Piao; Alan K Knapp; Aimée T Classen; Sara Vicca; Philippe Ciais; Mark J Hovenden; Sebastian Leuzinger; Claus Beier; Paul Kardol; Jianyang Xia; Qiang Liu; Jingyi Ru; Zhenxing Zhou; Yiqi Luo; Dali Guo; J Adam Langley; Jakob Zscheischler; Jeffrey S Dukes; Jianwu Tang; Jiquan Chen; Kirsten S Hofmockel; Lara M Kueppers; Lindsey Rustad; Lingli Liu; Melinda D Smith; Pamela H Templer; R Quinn Thomas; Richard J Norby; Richard P Phillips; Shuli Niu; Simone Fatichi; Yingping Wang; Pengshuai Shao; Hongyan Han; Dandan Wang; Lingjie Lei; Jiali Wang; Xiaona Li; Qian Zhang; Xiaoming Li; Fanglong Su; Bin Liu; Fan Yang; Gaigai Ma; Guoyong Li; Yanchun Liu; Yinzhan Liu; Zhongling Yang; Kesheng Zhang; Yuan Miao; Mengjun Hu; Chuang Yan; Ang Zhang; Mingxing Zhong; Yan Hui; Ying Li; Mengmei Zheng
Journal:  Nat Ecol Evol       Date:  2019-08-19       Impact factor: 15.460

Review 5.  Combined effects of heatwaves and micropollutants on freshwater ecosystems: Towards an integrated assessment of extreme events in multiple stressors research.

Authors:  Francesco Polazzo; Sabrina K Roth; Markus Hermann; Annika Mangold-Döring; Andreu Rico; Anna Sobek; Paul J Van den Brink; Michelle C Jackson
Journal:  Glob Chang Biol       Date:  2021-11-16       Impact factor: 13.211

6.  Methods for broad-scale plant phenology assessments using citizen scientists' photographs.

Authors:  Vijay V Barve; Laura Brenskelle; Daijiang Li; Brian J Stucky; Narayani V Barve; Maggie M Hantak; Bryan S McLean; Daniel J Paluh; Jessica A Oswald; Michael W Belitz; Ryan A Folk; Robert P Guralnick
Journal:  Appl Plant Sci       Date:  2020-01-08       Impact factor: 1.936

7.  Advancing global change biology through experimental manipulations: Where have we been and where might we go?

Authors:  Paul J Hanson; Anthony P Walker
Journal:  Glob Chang Biol       Date:  2019-11-29       Impact factor: 10.863

8.  Density-dependent oxylipin production in natural diatom communities: possible implications for plankton dynamics.

Authors:  Ennio Russo; Giuliana d'Ippolito; Angelo Fontana; Diana Sarno; Domenico D'Alelio; Greta Busseni; Adrianna Ianora; Eric von Elert; Ylenia Carotenuto
Journal:  ISME J       Date:  2019-10-14       Impact factor: 10.302

9.  Global ecological predictors of the soil priming effect.

Authors:  Felipe Bastida; Carlos García; Noah Fierer; David J Eldridge; Matthew A Bowker; Sebastián Abades; Fernando D Alfaro; Asmeret Asefaw Berhe; Nick A Cutler; Antonio Gallardo; Laura García-Velázquez; Stephen C Hart; Patrick E Hayes; Teresa Hernández; Zeng-Yei Hseu; Nico Jehmlich; Martin Kirchmair; Hans Lambers; Sigrid Neuhauser; Víctor M Peña-Ramírez; Cecilia A Pérez; Sasha C Reed; Fernanda Santos; Christina Siebe; Benjamin W Sullivan; Pankaj Trivedi; Alfonso Vera; Mark A Williams; José Luis Moreno; Manuel Delgado-Baquerizo
Journal:  Nat Commun       Date:  2019-08-02       Impact factor: 14.919

10.  Resident and phytometer plants host comparable rhizosphere fungal communities in managed grassland ecosystems.

Authors:  Ricardo Schöps; Kezia Goldmann; Lotte Korell; Helge Bruelheide; Tesfaye Wubet; François Buscot
Journal:  Sci Rep       Date:  2020-01-22       Impact factor: 4.379

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