| Literature DB >> 30140442 |
Thomas Weitzel1,2, Mabel Aylwin2, Constanza Martínez-Valdebenito3, Ju Jiang4, Jose Manuel Munita2, Luis Thompson2, Katia Abarca3, Allen L Richards4,5.
Abstract
BACKGROUND: Scrub typhus is a neglected vector-borne zoonosis causing life-threatening illnesses, endemic in the Asian-Pacific region and, as recently discovered, in southern Chile. Scrub typhus is rarely reported in travelers, most probably due to the lack of clinical experience and diagnostic tests in non-endemic countries. We report the first case of imported scrub typhus in South America. CASEEntities:
Keywords: Arthropod-borne diseases; Imported infection; Orientia tsutsugamushi; Scrub typhus; Travel
Year: 2018 PMID: 30140442 PMCID: PMC6097283 DOI: 10.1186/s40794-018-0070-8
Source DB: PubMed Journal: Trop Dis Travel Med Vaccines ISSN: 2055-0936
Fig. 1Coarse maculopapular rash of South Korean patient, predominantly affecting the trunk (a, b), accompanied by characteristic necrotic eschar on the dorsal face of the left thigh (c)
Primers and probes used for diagnostic and phylogenetic analysis
| Primer ID | Sequence | Annealing temp. | PCR | Reference |
|---|---|---|---|---|
| 16sU17F | AGAGTTTGATCCTGGCTCAG | 56 °C | First | [ |
| 16sOR1198R | TTTCCTATAGTTCCCGGCATT | 56 °C | First & second | |
| 16sO79F | ATTAATGCTGAGCTTGCTTAGCAT | 56 °C | Second | |
| Otr47_263F | GTGCTAAGAAARGATGATACTTC | 54 °C | First | [ |
| Otr1780R | AAATCGCCTTTAAACTAGATTTACTTATTA | 54 °C | First & second | |
| Otr47F | TAAAGGTTAAGTTTATGAAAAAGGCATTT | 54 °C | Second | |
| Otr56_498F | AATTAGTTTAGAATGGTTACCAC | 54 °C | First | |
| r56_585F | AATGTCTGCGTTGTCGTTGC | 54 °C | Second | |
| r56_2057 | TCCACATACACACCTTCAGC | 54 °C | First & second | [ |
| OtsuFP630 | AACTGATTTTATTCAAACTAATGCTGCT | 60 °C | Real time | [ |
| OtsuRP747 | TATGCCTGAGTAAGATACRTGAATRGAATT | 60 °C | Real time | [ |
| OtsuPR665 | 6FAM-TGGGTAGCTTTGGTGGACCGATGTTTAATCT-TAMRA | 60 °C | Real time | [ |
Fig. 2Phylogenetic analysis of Orientia tsutsugamushi isolate amplified from eschar sample of patient from South Korea. The trees were constructed based on 970 bp rrs (a) and 593 bp tsa56 (b) gene fragments of the patient and O. tsutsugamushi type strains/isolates (GenBank accession numbers are shown next to each agent) using the Maximum Likelihood method with the Tamura-Nei model. Evolutionary analyses were conducted in MEGA7 and the values for the bootstrap test (1000 replicates) are shown next to the branches