Literature DB >> 30138326

Agreement and reliability statistics for shapes.

Travis B Smith1, Ning Smith2.   

Abstract

We describe a methodology for assessing agreement and reliability among a set of shapes. Motivated by recent studies of the reliability of manually segmented medical images, we focus on shapes composed of rasterized, binary-valued data representing closed geometric regions of interest. The methodology naturally generalizes to N dimensions and other data types, though. We formulate the shape variance, shape correlation and shape intraclass correlation coefficient (ICC) in terms of a simple distance metric, the Manhattan norm, which quantifies the absolute difference between any two shapes. We demonstrate applications of this methodology by working through example shape variance calculations in 1-D, for the analysis of overlapping line segments, and 2-D, for the analysis of overlapping regions. We also report the results of a simulated reliability analysis of manually delineated shape boundaries, and we compare the shape ICC with the more conventional and commonly used area ICC. The proposed shape-sensitive methodology captures all of the variation in the shape measurements, and it provides a more accurate estimate of the measurement reliability than an analysis of only the measured areas.

Entities:  

Mesh:

Year:  2018        PMID: 30138326      PMCID: PMC6107162          DOI: 10.1371/journal.pone.0202087

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  11 in total

1.  Sample size requirements for estimating intraclass correlations with desired precision.

Authors:  Douglas G Bonett
Journal:  Stat Med       Date:  2002-05-15       Impact factor: 2.373

Review 2.  Applying the right statistics: analyses of measurement studies.

Authors:  J M Bland; D G Altman
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3.  Guidelines for Reporting Reliability and Agreement Studies (GRRAS) were proposed.

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4.  Reliability, repeatability and reproducibility: analysis of measurement errors in continuous variables.

Authors:  J W Bartlett; C Frost
Journal:  Ultrasound Obstet Gynecol       Date:  2008-04       Impact factor: 7.299

Review 5.  Intraclass correlations: uses in assessing rater reliability.

Authors:  P E Shrout; J L Fleiss
Journal:  Psychol Bull       Date:  1979-03       Impact factor: 17.737

6.  A Guideline of Selecting and Reporting Intraclass Correlation Coefficients for Reliability Research.

Authors:  Terry K Koo; Mae Y Li
Journal:  J Chiropr Med       Date:  2016-03-31

7.  Statistical methods for assessing agreement between two methods of clinical measurement.

Authors:  J M Bland; D G Altman
Journal:  Lancet       Date:  1986-02-08       Impact factor: 79.321

8.  Measurement and Reproducibility of Preserved Ellipsoid Zone Area and Preserved Retinal Pigment Epithelium Area in Eyes With Choroideremia.

Authors:  Amir H Hariri; Swetha B Velaga; Aniz Girach; Michael S Ip; Phuc V Le; Byron L Lam; M Dominik Fischer; Eeva-Marja Sankila; Mark E Pennesi; Frank G Holz; Robert E MacLaren; David G Birch; Carel B Hoyng; Ian M MacDonald; Graeme C Black; Stephen H Tsang; Neil M Bressler; Michael Larsen; Michael B Gorin; Andrew R Webster; SriniVas R Sadda
Journal:  Am J Ophthalmol       Date:  2017-05-10       Impact factor: 5.258

9.  The case for using the repeatability coefficient when calculating test-retest reliability.

Authors:  Sharmila Vaz; Torbjörn Falkmer; Anne Elizabeth Passmore; Richard Parsons; Pantelis Andreou
Journal:  PLoS One       Date:  2013-09-09       Impact factor: 3.240

10.  Reliability of a Manual Procedure for Marking the EZ Endpoint Location in Patients with Retinitis Pigmentosa.

Authors:  Rithambara Ramachandran; Cindy X Cai; Dongwon Lee; Benjamin C Epstein; Kirsten G Locke; David G Birch; Donald C Hood
Journal:  Transl Vis Sci Technol       Date:  2016-05-17       Impact factor: 3.283

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  1 in total

1.  Reliability of Spectral-Domain OCT Ellipsoid Zone Area and Shape Measurements in Retinitis Pigmentosa.

Authors:  Travis B Smith; Maria A Parker; Peter N Steinkamp; Albert Romo; Laura R Erker; Brandon J Lujan; Ning Smith
Journal:  Transl Vis Sci Technol       Date:  2019-06-11       Impact factor: 3.283

  1 in total

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