Literature DB >> 30136005

Stochastic Hybrid Systems in Cellular Neuroscience.

Paul C Bressloff1, James N Maclaurin2.   

Abstract

We review recent work on the theory and applications of stochastic hybrid systems in cellular neuroscience. A stochastic hybrid system or piecewise deterministic Markov process involves the coupling between a piecewise deterministic differential equation and a time-homogeneous Markov chain on some discrete space. The latter typically represents some random switching process. We begin by summarizing the basic theory of stochastic hybrid systems, including various approximation schemes in the fast switching (weak noise) limit. In subsequent sections, we consider various applications of stochastic hybrid systems, including stochastic ion channels and membrane voltage fluctuations, stochastic gap junctions and diffusion in randomly switching environments, and intracellular transport in axons and dendrites. Finally, we describe recent work on phase reduction methods for stochastic hybrid limit cycle oscillators.

Entities:  

Year:  2018        PMID: 30136005      PMCID: PMC6104574          DOI: 10.1186/s13408-018-0067-7

Source DB:  PubMed          Journal:  J Math Neurosci            Impact factor:   1.300


  92 in total

1.  Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations.

Authors:  T B Kepler; T C Elston
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

Review 2.  Gap junction channel gating.

Authors:  Feliksas F Bukauskas; Vytas K Verselis
Journal:  Biochim Biophys Acta       Date:  2004-03-23

3.  Axonal transport of neurofilaments: a single population of intermittently moving polymers.

Authors:  Yinyun Li; Peter Jung; Anthony Brown
Journal:  J Neurosci       Date:  2012-01-11       Impact factor: 6.167

4.  Synaptic democracy in active dendrites.

Authors:  Clifton C Rumsey; L F Abbott
Journal:  J Neurophysiol       Date:  2006-07-12       Impact factor: 2.714

5.  Phase reduction of stochastic limit cycle oscillators.

Authors:  Kazuyuki Yoshimura; Kenichi Arai
Journal:  Phys Rev Lett       Date:  2008-10-08       Impact factor: 9.161

6.  Caveats in modeling a common motif in genetic circuits.

Authors:  Darka Labavić; Hannes Nagel; Wolfhard Janke; Hildegard Meyer-Ortmanns
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-06-17

7.  Gene expression dynamics in randomly varying environments.

Authors:  Michael W Smiley; Stephen R Proulx
Journal:  J Math Biol       Date:  2009-09-16       Impact factor: 2.259

8.  An exact stochastic hybrid model of excitable membranes including spatio-temporal evolution.

Authors:  Evelyn Buckwar; Martin G Riedler
Journal:  J Math Biol       Date:  2011-01-18       Impact factor: 2.259

9.  Neuropeptide delivery to synapses by long-range vesicle circulation and sporadic capture.

Authors:  Man Yan Wong; Chaoming Zhou; Dinara Shakiryanova; Thomas E Lloyd; David L Deitcher; Edwin S Levitan
Journal:  Cell       Date:  2012-03-02       Impact factor: 41.582

Review 10.  Local mechanisms regulating selective cargo entry and long-range trafficking in axons.

Authors:  Laura F Gumy; Casper C Hoogenraad
Journal:  Curr Opin Neurobiol       Date:  2018-03-03       Impact factor: 6.627

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