Literature DB >> 30132838

Biological functions, regulatory mechanisms, and disease relevance of RNA localization pathways.

Samantha Bovaird1,2, Dhara Patel1,3, Juan-Carlos Alberto Padilla1,2, Eric Lécuyer1,2,3,4.   

Abstract

The asymmetric subcellular distribution of RNA molecules from their sites of transcription to specific compartments of the cell is an important aspect of post-transcriptional gene regulation. This involves the interplay of intrinsic cis-regulatory elements within the RNA molecules with trans-acting RNA-binding proteins and associated factors. Together, these interactions dictate the intracellular localization route of RNAs, whose downstream impacts have wide-ranging implications in cellular physiology. In this review, we examine the mechanisms underlying RNA localization and discuss their biological significance. We also review the growing body of evidence pointing to aberrant RNA localization pathways in the development and progression of diseases.
© 2018 Federation of European Biochemical Societies.

Keywords:  Cis-regulatory elements; RNA disease; RNA localization; RNA-binding proteins

Mesh:

Substances:

Year:  2018        PMID: 30132838     DOI: 10.1002/1873-3468.13228

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  10 in total

1.  Organizing the oocyte: RNA localization meets phase separation.

Authors:  Sarah E Cabral; Kimberly L Mowry
Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

2.  In Vivo Visualization of Mobile mRNA Particles in Plants Using BglG.

Authors:  Eduardo J Peña; Manfred Heinlein
Journal:  Methods Mol Biol       Date:  2022

3.  Illuminating lncRNA Function Through Target Prediction.

Authors:  Hua-Sheng Chiu; Sonal Somvanshi; Ting-Wen Chen; Pavel Sumazin
Journal:  Methods Mol Biol       Date:  2021

Review 4.  Mechanisms and consequences of subcellular RNA localization across diverse cell types.

Authors:  Krysta L Engel; Ankita Arora; Raeann Goering; Hei-Yong G Lo; J Matthew Taliaferro
Journal:  Traffic       Date:  2020-04-29       Impact factor: 6.215

5.  RNA Interactome Identification via RNA-BioID in Mouse Embryonic Fibroblasts.

Authors:  Joyita Mukherjee; Mirita Franz-Wachtel; Boris Maček; Ralf-Peter Jansen
Journal:  Bio Protoc       Date:  2020-01-05

Review 6.  RNA transport from transcription to localized translation: a single molecule perspective.

Authors:  Eugenia Basyuk; Florence Rage; Edouard Bertrand
Journal:  RNA Biol       Date:  2020-11-13       Impact factor: 4.652

7.  Global SLAM-seq for accurate mRNA decay determination and identification of NMD targets.

Authors:  Hanna Alalam; Jorge A Zepeda-Martínez; Per Sunnerhagen
Journal:  RNA       Date:  2022-03-16       Impact factor: 5.636

8.  The kinesin KIF1C transports APC-dependent mRNAs to cell protrusions.

Authors:  Xavier Pichon; Konstadinos Moissoglu; Emeline Coleno; Tianhong Wang; Arthur Imbert; Marie-Cécile Robert; Marion Peter; Racha Chouaib; Thomas Walter; Florian Mueller; Kazem Zibara; Edouard Bertrand; Stavroula Mili
Journal:  RNA       Date:  2021-09-07       Impact factor: 4.942

Review 9.  G3BPs in Plant Stress.

Authors:  Aala A Abulfaraj; Heribert Hirt; Naganand Rayapuram
Journal:  Front Plant Sci       Date:  2021-06-10       Impact factor: 5.753

Review 10.  Sequence Determinants for Nuclear Retention and Cytoplasmic Export of mRNAs and lncRNAs.

Authors:  Alexander F Palazzo; Eliza S Lee
Journal:  Front Genet       Date:  2018-10-17       Impact factor: 4.599

  10 in total

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