Literature DB >> 30128965

Trends in herbgenomics.

Tianyi Xin1, Yu Zhang1, Xiangdong Pu1, Ranran Gao1, Zhichao Xu2, Jingyuan Song3,4.   

Abstract

From Shen Nong's Herbal Classic (Shennong Bencao Jing) to the Compendium of Materia Medica (Bencao Gangmu) and the first scientific Nobel Prize for the mainland of China, each milestone in the historical process of the development of traditional Chinese medicine (TCM) involves screening, testing and integrating. After thousands of years of inheritance and development, herbgenomics (bencaogenomics) has bridged the gap between TCM and international advanced omics studies, promoting the application of frontier technologies in TCM. It is a discipline that uncovers the genetic information and regulatory networks of herbs to clarify their molecular mechanism in the prevention and treatment of human diseases. The main theoretical system includes genomics, functional genomics, proteomics, transcriptomics, metabolomics, epigenomics, metagenomics, synthetic biology, pharmacogenomics of TCM, and bioinformatics, among other fields. Herbgenomics is mainly applicable to the study of medicinal model plants, genomic-assisted breeding, herbal synthetic biology, protection and utilization of gene resources, TCM quality evaluation and control, and TCM drug development. Such studies will accelerate the application of cutting-edge technologies, revitalize herbal research, and strongly promote the development and modernization of TCM.

Entities:  

Keywords:  herbgenomics (bencaogenomics); omics; practical application; traditional Chinese medicine

Mesh:

Substances:

Year:  2018        PMID: 30128965     DOI: 10.1007/s11427-018-9352-7

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  13 in total

1.  The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration.

Authors:  Xiangdong Pu; Zhen Li; Ya Tian; Ranran Gao; Lijun Hao; Yating Hu; Chunnian He; Wei Sun; Meimei Xu; Reuben J Peters; Yves Van de Peer; Zhichao Xu; Jingyuan Song
Journal:  New Phytol       Date:  2020-04-18       Impact factor: 10.151

Review 2.  Traditional Chinese medicine promotes bone regeneration in bone tissue engineering.

Authors:  Zheng-Rong Gao; Yun-Zhi Feng; Ya-Qiong Zhao; Jie Zhao; Ying-Hui Zhou; Qin Ye; Yun Chen; Li Tan; Shao-Hui Zhang; Yao Feng; Jing Hu; Ze-Yue Ou-Yang; Marie Aimee Dusenge; Yue Guo
Journal:  Chin Med       Date:  2022-07-20       Impact factor: 4.546

3.  TaqMan Probe-Based Quantitative Real-Time PCR to Detect Panax notoginseng in Traditional Chinese Patent Medicines.

Authors:  Qian Lou; Tianyi Xin; Wenjie Xu; Ranjun Li; Jingyuan Song
Journal:  Front Pharmacol       Date:  2022-05-24       Impact factor: 5.988

4.  African Pharmacogenomics Consortium: Consolidating pharmacogenomics knowledge, capacity development and translation in Africa: Consolidating pharmacogenomics knowledge, capacity development and translation in Africa.

Authors:  Collet Dandara; Collen Masimirembwa; Yosr Z Haffani; Bernhards Ogutu; Jenniffer Mabuka; Eleni Aklillu; Oluseye Bolaji
Journal:  AAS Open Res       Date:  2019-06-04

5.  Assembly and Annotation of a Draft Genome of the Medicinal Plant Polygonum cuspidatum.

Authors:  Yonghong Zhang; Lanlan Zheng; Yan Zheng; Chao Zhou; Ping Huang; Xiao Xiao; Yongheng Zhao; Xincai Hao; Zhubing Hu; Qinhua Chen; Hongliang Li; Xuanbin Wang; Kenji Fukushima; Guodong Wang; Chen Li
Journal:  Front Plant Sci       Date:  2019-10-18       Impact factor: 5.753

6.  Highly variable chloroplast genome from two endangered Papaveraceae lithophytes Corydalis tomentella and Corydalis saxicola.

Authors:  Fengming Ren; Liqiang Wang; Ying Li; Wei Zhuo; Zhichao Xu; Haojie Guo; Yan Liu; Ranran Gao; Jingyuan Song
Journal:  Ecol Evol       Date:  2021-03-19       Impact factor: 2.912

7.  Chromosome-Scale Assembly of the Dendrobium nobile Genome Provides Insights Into the Molecular Mechanism of the Biosynthesis of the Medicinal Active Ingredient of Dendrobium.

Authors:  Qing Xu; Shan-Ce Niu; Kang-Li Li; Pei-Ji Zheng; Xiao-Jing Zhang; Yin Jia; Yang Liu; Yun-Xia Niu; Li-Hong Yu; Duan-Fen Chen; Guo-Qiang Zhang
Journal:  Front Genet       Date:  2022-03-01       Impact factor: 4.599

8.  Genome-Wide Characterization and Analysis of bHLH Transcription Factors Related to Crocin Biosynthesis in Gardenia jasminoides Ellis (Rubiaceae).

Authors:  Ya Tian; Xiangdong Pu; Haoying Yu; Aijia Ji; Ranran Gao; Yating Hu; Zhichao Xu; Hualei Wang
Journal:  Biomed Res Int       Date:  2020-04-06       Impact factor: 3.411

9.  Metabolite identification of gut microflora-cassia seed interactions using UPLC-QTOF/MS.

Authors:  Su-Hui Wu; Han-Bing Li; Gen-Lin Li; Ning Lv; Yue-Juan Qi
Journal:  Exp Ther Med       Date:  2020-03-09       Impact factor: 2.447

10.  Comparative Genome Analysis of Scutellaria baicalensis and Scutellaria barbata Reveals the Evolution of Active Flavonoid Biosynthesis.

Authors:  Zhichao Xu; Ranran Gao; Xiangdong Pu; Rong Xu; Jiyong Wang; Sihao Zheng; Yan Zeng; Jun Chen; Chunnian He; Jingyuan Song
Journal:  Genomics Proteomics Bioinformatics       Date:  2020-11-04       Impact factor: 7.691

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