| Literature DB >> 30126398 |
Zhen Sun1, Wei Gao2, Jiang-Tao Cui3.
Abstract
BACKGROUND: There are different and inconsistent conclusions regarding the genetic relationship between the human tumor suppressor p53 (TP53) rs1042522 polymorphism and the risk of oral squamous cell carcinoma (OSCC) and oral leukoplakia (OL). Therefore, the aim of the study was to comprehensively reassess this association through the performance of an updated meta-analysis.Entities:
Keywords: Meta-analysis; OL; OSCC; Polymorphism; TP53
Mesh:
Substances:
Year: 2018 PMID: 30126398 PMCID: PMC6102817 DOI: 10.1186/s12903-018-0603-6
Source DB: PubMed Journal: BMC Oral Health ISSN: 1472-6831 Impact factor: 2.757
Fig. 1The PRISMA 2009 flow diagram of our study
Meta-analysis of TP53 rs1042522 and OSCC risk
| Genetic models | Overall/Subgroup | N | Case/control | ORs (95% CIs) |
| I2 (%) |
| Statistical model | |
|---|---|---|---|---|---|---|---|---|---|
| allele C vs. G | overall | 17 | 3047/3305 | 1.02 (0.90, 1.15) | 0.741 | 55.0 | 0.003 | Random | |
| Control source | PB | 13 | 2477/2485 | 1.01 (0.86, 1.18) | 0.925 | 63.7 | 0.001 | ||
| HB | 3 | 381/704 | 1.01 (0.83, 1.22) | 0.933 | 0.0 | 0.663 | |||
| Location | India | 4 | 577/498 | 1.29 (0.79, 2.08) | 0.306 | 79.1 | 0.002 | ||
| USA | 4 | 942/1357 | 0.96 (0.84, 1.10) | 0.560 | 0.0 | 0.768 | |||
| China | 3 | 1115/767 | 1.02 (0.79, 1.31) | 0.886 | 68.5 | 0.042 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.10 (0.93, 1.29) | 0.253 | 58.4 | 0.006 | ||
| Caucasian | 4 | 817/1165 | 0.86 (0.70, 1.06) | 0.158 | 46.0 | 0.135 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.12 (0.92, 1.36) | 0.244 | 59.5 | 0.030 | ||
| HPV16(−) | 4 | 208/255 | 1.06 (0.47, 2.40) | 0.884 | 83.4 | < 0.001 | |||
| HPV16(+) | 4 | 93/197 | 1.38 (0.88, 2.16) | 0.157 | 0.0 | 0.865 | |||
| carrier C vs. G | overall | 17 | 3047/3305 | 0.99 (0.91, 1.08) | 0.853 | 0.0 | 0.460 | Fixed | |
| Control source | PB | 13 | 2477/2485 | 0.98 (0.89, 1.08) | 0.685 | 20.0 | 0.242 | ||
| HB | 3 | 381/704 | 1.00 (0.80, 1.25) | 0.990 | 0.0 | 0.878 | |||
| Location | India | 4 | 577/498 | 1.02 (0.84, 1.25) | 0.820 | 40.6 | 0.168 | ||
| USA | 4 | 942/1357 | 0.97 (0.83, 1.12) | 0.666 | 0.0 | 0.902 | |||
| China | 3 | 1115/767 | 1.01 (0.87, 1.18) | 0.869 | 8.9 | 0.334 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.03 (0.92, 1.15) | 0.601 | 0.0 | 0.600 | ||
| Caucasian | 4 | 817/1165 | 0.89 (0.76, 1.05) | 0.179 | 35.6 | 0.199 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.06 (0.93, 1.20) | 0.414 | 0.0 | 0.510 | ||
| HPV16(−) | 4 | 208/255 | 0.94 (0.66, 1.34) | 0.729 | 69.4 | 0.020 | |||
| HPV16(+) | 4 | 93/197 | 1.20 (0.71, 2.01) | 0.493 | 0.0 | 0.926 | |||
| homozygote CC vs. GG | overall | 17 | 3047/3305 | 1.03 (0.88, 1.21) | 0.085 | 33.9 | 0.733 | Fixed | |
| Control source | PB | 13 | 2477/2485 | 1.00 (0.83, 1.20) | 0.989 | 45.0 | 0.040 | ||
| HB | 3 | 381/704 | 1.06 (0.69, 1.62) | 0.799 | 0.0 | 0.587 | |||
| Location | India | 4 | 577/498 | 1.04 (0.74, 1.47) | 0.812 | 75.6 | 0.006 | ||
| USA | 4 | 942/1357 | 0.97 (0.70, 1.34) | 0.846 | 0.0 | 0.945 | |||
| China | 3 | 1115/767 | 1.00 (0.76, 1.32) | 0.997 | 65.3 | 0.056 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.06 (0.88, 1.28) | 0.559 | 53.1 | 0.015 | ||
| Caucasian | 4 | 817/1165 | 0.91 (0.63, 1.31) | 0.602 | 0.0 | 0.972 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.16 (0.92, 1.46) | 0.224 | 56.1 | 0.044 | ||
| HPV16(−) | 4 | 208/255 | 1.46 (0.79, 2.73) | 0.230 | 51.4 | 0.103 | |||
| HPV16(+) | 4 | 93/197 | 2.40 (0.96, 5.99) | 0.061 | 0.0 | 0.843 | |||
| heterozygote GC vs. GG | overall | 17 | 3047/3305 | 0.99 (0.89, 1.11) | 0.882 | 37.4 | 0.061 | Fixed | |
| Control source | PB | 13 | 2477/2485 | 0.98 (0.86, 1.11) | 0.706 | 50.1 | 0.020 | ||
| HB | 3 | 381/704 | 0.98 (0.75, 1.28) | 0.861 | 0.0 | 0.969 | |||
| Location | India | 4 | 577/498 | 1.10 (0.82, 1.48) | 0.541 | 0.0 | 0.402 | ||
| USA | 4 | 942/1357 | 0.94 (0.79, 1.12) | 0.470 | 0.0 | 0.709 | |||
| China | 3 | 1115/767 | 1.10 (0.89, 1.35) | 0.386 | 61.0 | 0.076 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.10 (0.95, 1.28) | 0.196 | 0.0 | 0.595 | ||
| Caucasian | 4 | 817/1165 | 0.81 (0.67, 0.98) |
| 71.5 | 0.014 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.15 (0.96, 1.38) | 0.125 | 0.0 | 0.715 | ||
| HPV16(−) | 4 | 208/255 | 0.93 (0.30, 2.92) | 0.904 | 80.6 | 0.001 | |||
| HPV16(+) | 4 | 93/197 | 0.96 (0.32, 2.86) | 0.937 | 40.9 | 0.166 | |||
| dominant GC + CC vs. GG | overall | 17 | 3047/3305 | 1.01 (0.86, 1.19) | 0.969 | 47.6 | 0.015 | Random | |
| Control source | PB | 13 | 2477/2485 | 1.00 (0.81, 1.23) | 0.936 | 57.5 | 0.005 | ||
| HB | 3 | 381/704 | 1.01 (0.86, 1.19) | 0.181 | 0.0 | 0.877 | |||
| Location | India | 4 | 577/498 | 1.31 (0.77, 2.21) | 0.321 | 57.8 | 0.068 | ||
| USA | 4 | 942/1357 | 0.94 (0.80, 1.11) | 0.481 | 0.0 | 0.700 | |||
| China | 3 | 1115/767 | 1.07 (0.72, 1.58) | 0.736 | 70.5 | 0.034 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.13 (0.93, 1.36) | 0.220 | 32.9 | 0.127 | ||
| Caucasian | 4 | 817/1165 | 0.78 (0.56, 1.07) | 0.123 | 64.2 | 0.039 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.15 (0.95, 1.40) | 0.144 | 16.2 | 0.309 | ||
| HPV16(−) | 4 | 208/255 | 1.04 (0.32, 3.37) | 0.942 | 83.9 | < 0.001 | |||
| HPV16(+) | 4 | 93/197 | 1.21 (0.62, 2.37) | 0.573 | 0.0 | 0.513 | |||
| recessive CC vs. GG + GC | overall | 17 | 3047/3305 | 1.00 (0.87, 1.16) | 0.980 | 22.8 | 0.189 | Fixed | |
| Control source | PB | 13 | 2477/2485 | 0.98 (0.84, 1.15) | 0.794 | 36.4 | 0.092 | ||
| HB | 3 | 381/704 | 1.06 (0.71, 1.59) | 0.765 | 0.0 | 0.560 | |||
| Location | India | 4 | 577/498 | 1.00 (0.75, 1.33) | 0.997 | 75.6 | 0.006 | ||
| USA | 4 | 942/1357 | 0.99 (0.72, 1.36) | 0.954 | 0.0 | 0.978 | |||
| China | 3 | 1115/767 | 0.95 (0.74, 1.21) | 0.652 | 13.5 | 0.315 | |||
| Ethnicity | Asian | 12 | 2028/1807 | 1.00 (0.85, 1.18) | 0.977 | 46.3 | 0.039 | ||
| Caucasian | 4 | 817/1165 | 0.98 (0.69, 1.40) | 0.927 | 0.0 | 0.977 | |||
| Disease type | oral cavity | 6 | 1295/1372 | 1.00 (0.85, 1.18) | 0.392 | 57.6 | 0.038 | ||
| HPV16(−) | 4 | 208/255 | 1.00 (0.85, 1.18) | 0.353 | 16.3 | 0.310 | |||
| HPV16(+) | 4 | 93/197 | 1.00 (0.85, 1.18) |
| 0.0 | 0.445 | |||
OSCC, oral squamous cell carcinoma; HPV, Human papillomavirus; N, number of case-control studies; PB, population-based control; HB, hospital-based control; HPV, Human papillomavirus; ORs, odd ratios; CIs, confidence intervals; PA, P value of association test; PH, P values of heterogeneity test
PA value <0.05, the number is in bold
Fig. 2Meta-analysis (allele C vs. G) of TP53 rs1042522 and OSCC risk
Meta-analysis of TP53 rs1042522 and OL risk
| Genetic models | Overall/Subgroup | N | Case/control | ORs (95% CIs) |
| I2 (%) |
| Statistical model | |
|---|---|---|---|---|---|---|---|---|---|
| allele C vs. G | Overall | 6 | 391/763 | 1.16 (0.73, 1.84) | 0.525 | 77.1 | 0.001 | Random | |
| Control source | PB | 4 | 291/647 | 0.77 (0.59, 1.01) | 0.055 | 21.7 | 0.280 | ||
| Location | India | 4 | 307/465 | 1.05 (0.57, 1.92) | 0.879 | 78.7 | 0.003 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.99 (0.65, 1.49) | 0.952 | 71.8 | 0.007 | ||
| carrier C vs. G | overall | 6 | 391/763 | 0.93 (0.76, 1.15) | 0.510 | 41.0 | 0.132 | Fixed | |
| Control source | PB | 4 | 291/647 | 0.82 (0.65, 1.03) | 0.090 | 0.0 | 0.713 | ||
| Location | India | 4 | 307/465 | 0.89 (0.70, 1.13) | 0.353 | 39.1 | 0.177 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.90 (0.73, 1.11) | 0.334 | 19.3 | 0.292 | ||
| homozygote CC vs. GG | overall | 6 | 391/763 | 1.14 (0.49, 2.62) | 0.764 | 69.2 | 0.006 | Random | |
| Control source | PB | 4 | 291/647 | 0.52 (0.34, 0.80) |
| 1.0 | 0.387 | ||
| Location | India | 4 | 307/465 | 1.06 (0.33, 3.37) | 0.920 | 75.6 | 0.006 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.93 (0.41, 2.08) | 0.854 | 67.5 | 0.015 | ||
| heterozygote GC vs. GG | overall | 6 | 391/763 | 0.95 (0.71, 1.29) | 0.760 | 45.2 | 0.104 | Fixed | |
| Control source | PB | 4 | 291/647 | 0.85 (0.61, 1.18) | 0.330 | 0.0 | 0.700 | ||
| Location | India | 4 | 307/465 | 0.81 (0.57, 1.15) | 0.239 | 0.0 | 0.827 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.87 (0.64, 1.19) | 0.388 | 0.0 | 0.803 | ||
| dominant GC + CC vs. GG | overall | 6 | 391/763 | 1.20 (0.66, 2.18) | 0.557 | 63.1 | 0.019 | Random | |
| Control source | PB | 4 | 291/647 | 0.73 (0.53, 1.00) | 0.050 | 0.0 | 0.460 | ||
| Location | India | 4 | 307/465 | 0.88 (0.51, 1.50) | 0.629 | 32.0 | 0.220 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.87 (0.60, 1.25) | 0.446 | 21.0 | 0.281 | ||
| recessive CC vs. GG + GC | overall | 6 | 391/763 | 1.04 (0.53, 2.05) | 0.907 | 68.9 | 0.007 | Random | |
| Control source | PB | 4 | 291/647 | 0.59 (0.41, 0.85) |
| 0.0 | 0.505 | ||
| Location | India | 4 | 307/465 | 1.11 (0.42, 2.98) | 0.829 | 79.7 | 0.002 | ||
| Ethnicity | Asian | 5 | 377/745 | 0.97 (0.47, 2.01) | 0.943 | 73.6 | 0.004 | ||
OL, oral leukoplakia; N, number of case-control studies; PB: population-based control; ORs, odd ratios; CIs, confidence intervals; PA, P value of association test; PH, P values of heterogeneity test
PA value <0.05, the number is in bold
Fig. 3Meta-analysis (allele C vs. G) of TP53 rs1042522 and OL risk
Publication bias evaluation
| Genetic models | Begg’s test* | Egger’s test | ||
|---|---|---|---|---|
| z |
| t |
| |
| allele C vs. G | 1.03 | 0.303 | 0.88 | 0.393 |
| carrier C vs. G | 0.78 | 0.434 | 0.52 | 0.609 |
| homozygote CC vs. GG | 0.78 | 0.434 | 1.51 | 0.152 |
| heterozygote GC vs. GG | 0.95 | 0.343 | 0.19 | 0.856 |
| dominant GC + CC vs. GG | 0.78 | 0.434 | 0.69 | 0.504 |
| recessive CC vs. GG + GC | 0.87 | 0.387 | 1.63 | 0.124 |
*continuity corrected; OSCC, oral squamous cell carcinoma;
OL, oral leukoplakia; P, P value of Begg’s test; P, P value of Egger’s test
Fig. 4Publication bias evaluation (allele C vs. G) of TP53 rs1042522 and OSCC risk. (a) Begg’s test; (b) Egger’s test
Fig. 5Sensitivity analysis (allele C vs. G) of TP53 rs1042522 and OSCC risk