Literature DB >> 30119883

Characterization of a novel ω-transaminase from a Triassic salt mine metagenome.

Stephen A Kelly1, Timofey Skvortsov1, Damian Magill2, Derek J Quinn3, John W McGrath2, Christopher C R Allen2, Thomas S Moody4, Brendan F Gilmore5.   

Abstract

Chiral amines are valuable building blocks for the pharmaceutical industry, and are increasingly synthesized by transaminase-mediated (TAm) synthesis. Currently available TAms, primarily isolated from the genomes of cultured mesophilic bacteria, often suffer from a number of drawbacks, including poor substrate range and an inability to tolerate the harsh conditions often demanded by industrial processes. These characteristics have, in part, driven the search for novel biocatalysts from both metagenomic sources and extreme environments. Herein, we report the isolation and characterization of an ω-TAm from a metagenome of a Triassic salt mine in Kilroot, N. Ireland, an extremely hypersaline environment formed circa 220-250 mya. The gene sequence was identified based on homology with existing bacterial TAms, synthesized within a pET28a(+) plasmid and expressed in E. coli BL21 DE3 cells. The resultant 49 kDa protein accepted (S)-methylbenzylamine (MBA) as amino donor and had a specific activity of 0.54 U/mg using α-ketoglutarate (ΑKG) as substrate. Molecular modeling and substrate docking indicated the presence of key residues, conserved in a number of other TAms. Despite the hypersaline environment from which it was isolated, the enzyme displayed low halotolerance, highlighting that not all biocatalysts will demonstrate the extreme characteristics associated with their source environment. This study does however reinforce the viability of mining metagenomic datasets as a means of discovering novel and functional biocatalysts, and adds to a currently scant list of such examples in the field of TAms.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  Biocatalysis; Chiral amine; Halophile; Hypersaline; Metagenome; Transaminase

Mesh:

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Year:  2018        PMID: 30119883     DOI: 10.1016/j.bbrc.2018.08.073

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  2 in total

Review 1.  Transaminases for industrial biocatalysis: novel enzyme discovery.

Authors:  Stephen A Kelly; Stefan Mix; Thomas S Moody; Brendan F Gilmore
Journal:  Appl Microbiol Biotechnol       Date:  2020-04-16       Impact factor: 4.813

2.  Characterization of proteins from the 3N5M family reveals an operationally stable amine transaminase.

Authors:  Manideep Kollipara; Philipp Matzel; Miriam Sowa; Stefan Brott; Uwe Bornscheuer; Matthias Höhne
Journal:  Appl Microbiol Biotechnol       Date:  2022-08-06       Impact factor: 5.560

  2 in total

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